Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 1.7e-120 436.0 229 100.0
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 2.0e-60 236.5 227 56.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 6.5e-59 231.5 228 57.5
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 2.3e-56 223.0 226 52.7
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 3.4e-55 219.2 221 55.2
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 7.5e-55 218.0 230 53.0
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 7.5e-55 218.0 224 53.6
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 1.7e-54 216.9 225 51.1
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 4.8e-54 215.3 209 56.5
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 6.3e-54 214.9 227 53.3
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 2.4e-53 213.0 226 53.1
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 4.1e-53 212.2 226 53.1
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 1.2e-52 210.7 226 52.7
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 2.0e-52 209.9 227 51.5
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 2.0e-52 209.9 244 49.6
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 7.7e-52 208.0 228 50.9
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 6.6e-51 204.9 225 48.4
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 6.6e-51 204.9 225 48.4
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 8.6e-51 204.5 226 52.2
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 2.5e-50 203.0 225 51.6
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 3.3e-50 202.6 223 53.4
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 4.2e-50 202.2 228 48.7
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 4.2e-50 202.2 229 45.4
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 4.2e-50 202.2 222 50.9
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 4.2e-50 202.2 225 51.1
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 4.2e-50 202.2 225 51.1
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 5.5e-50 201.8 229 52.0
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 2.8e-49 199.5 225 52.4
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 4.7e-49 198.7 225 48.0
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 6.1e-49 198.4 229 48.5
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 8.0e-49 198.0 225 51.1
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 8.0e-49 198.0 245 46.9
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 8.0e-49 198.0 225 52.0
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 1.4e-48 197.2 223 50.7
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 1.8e-48 196.8 225 50.7
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 3.0e-48 196.1 225 52.9
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 5.2e-48 195.3 228 46.5
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 2.0e-47 193.4 226 51.8
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 2.6e-47 193.0 236 45.3
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 5.7e-47 191.8 225 45.3
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 7.5e-47 191.4 223 48.4
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 2.8e-46 189.5 236 44.5
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 3.7e-46 189.1 229 48.0
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 3.7e-46 189.1 225 46.7
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 8.3e-46 188.0 207 53.6
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.8e-45 186.8 227 52.4
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 2.4e-45 186.4 225 44.9
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 2.4e-45 186.4 224 50.4
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 2.4e-45 186.4 225 46.7
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 2.4e-45 186.4 225 46.7
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 3.2e-45 186.0 224 45.5
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.0e-43 181.0 228 47.8
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.0e-43 181.0 207 50.7
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.3e-43 180.6 226 47.8
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 1.7e-43 180.3 223 48.9
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 1.7e-43 180.3 230 45.7
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 2.9e-43 179.5 233 45.5
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 6.6e-43 178.3 227 48.0
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 2.5e-42 176.4 224 48.2
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 7.3e-42 174.9 225 42.2
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 9.5e-42 174.5 224 47.3
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 1.2e-41 174.1 228 46.1
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 1.2e-41 174.1 220 45.9
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 1.6e-41 173.7 225 42.2
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 8.0e-41 171.4 176 50.6
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 3.1e-40 169.5 224 44.2
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 4.0e-40 169.1 225 44.0
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 5.2e-40 168.7 223 44.4
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 5.8e-39 165.2 224 43.8
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 9.8e-39 164.5 225 44.4
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.2e-38 163.3 233 43.8
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 8.3e-38 161.4 224 42.0
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 8.3e-38 161.4 226 42.5
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 8.3e-38 161.4 217 42.9
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.4e-37 160.6 225 40.0
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.9e-37 160.2 225 41.3
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.6e-36 157.1 225 43.6
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.0e-36 156.8 204 46.1
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 2.7e-36 156.4 228 43.9
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 4.6e-36 155.6 223 43.0
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 6.0e-36 155.2 226 43.4
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.0e-36 155.2 190 47.9
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 1.0e-35 154.5 164 51.2
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.7e-35 153.7 224 40.6
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 3.0e-35 152.9 226 42.9
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 3.0e-35 152.9 225 42.2
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 4.3e-34 149.1 226 42.5
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 5.6e-34 148.7 228 42.5
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 5.6e-34 148.7 228 42.5
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 7.5e-31 138.3 292 34.2
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 9.8e-31 137.9 189 40.2
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 8.3e-30 134.8 225 40.0
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 3.2e-29 132.9 221 40.7
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 4.1e-29 132.5 169 42.6
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 1.2e-28 131.0 265 35.5
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 2.1e-28 130.2 218 36.7
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.3e-27 127.5 255 36.1
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 2.0e-23 113.6 113 52.2
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 3.4e-23 112.8 146 45.9
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.9e-21 107.1 242 31.4
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 7.6e-15 85.1 226 28.3
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 8.7e-11 71.6 186 29.0
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.5e-10 70.1 126 33.3


User provided reference genes

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