Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02155 Eucalyptus grandis HOM05D000611 ORTHO05D007148 4.3e-133 478.0 243 100.0
CiPaw.08G056200 Carya illinoinensis HOM05D000611 ORTHO05D007148 1.0e-49 201.1 238 50.0
Haze_22470 Corylus avellana HOM05D000611 ORTHO05D007148 3.9e-46 189.1 245 49.0
Cfa013806 Carpinus fangiana HOM05D000611 ORTHO05D007148 3.3e-45 186.0 243 49.4
Prupe.1G533300 Prunus persica HOM05D000611 ORTHO05D007148 9.7e-45 184.5 242 45.9
Duzib041G0784 Durio zibethinus HOM05D000611 ORTHO05D007148 1.2e-39 167.5 138 65.2
Dinv42604 Davidia involucrata HOM05D000611 ORTHO05D007148 4.7e-39 165.6 250 46.8
Duzib093G1834 Durio zibethinus HOM05D000611 ORTHO05D007148 2.3e-38 163.3 218 45.9
Glyma.06G097400 Glycine max HOM05D000611 ORTHO05D007148 2.3e-38 163.3 223 45.7
Thecc.08G071900 Theobroma cacao HOM05D000611 ORTHO05D007148 2.3e-38 163.3 248 44.8
QL09p017982 Quercus lobata HOM05D000611 ORTHO05D007148 4.0e-38 162.5 173 54.9
Glyma.04G095700 Glycine max HOM05D000611 ORTHO05D007148 1.5e-37 160.6 226 45.1
Potri.002G111400 Populus trichocarpa HOM05D000611 ORTHO05D007148 5.7e-37 158.7 242 45.5
COL.COLO4_35256 Corchorus olitorius HOM05D000611 ORTHO05D007148 1.7e-36 157.1 152 61.2
VMungo1309G0330 Vigna mungo HOM05D000611 ORTHO05D007148 1.7e-36 157.1 141 58.9
Potri.005G153200 Populus trichocarpa HOM05D000611 ORTHO05D007148 4.8e-36 155.6 232 44.0
MD15G1387000 Malus domestica HOM05D000611 ORTHO05D007148 6.3e-36 155.2 144 56.9
Cpa.g.c34457.2 Carica papaya HOM05D000611 ORTHO05D007148 1.4e-35 154.1 232 44.4
Dinv44867 Davidia involucrata HOM05D000611 ORTHO05D007148 1.4e-35 154.1 242 45.9
Phvul.009G036100 Phaseolus vulgaris HOM05D000611 ORTHO05D007148 1.2e-34 151.0 141 56.0
Atru.chr13.1000 Acer truncatum HOM05D000611 ORTHO05D007148 1.6e-34 150.6 248 42.7
Sabra02G0087900 Salix brachista HOM05D000611 ORTHO05D007148 3.5e-34 149.4 243 44.0
Manes.05G190000 Manihot esculenta HOM05D000611 ORTHO05D007148 4.5e-34 149.1 139 59.0
Ciclev10001318m.g Citrus clementina HOM05D000611 ORTHO05D007148 1.7e-33 147.1 128 64.1
CANSAT21G1807 Cannabis sativa HOM05D000611 ORTHO05D007148 2.9e-33 146.4 120 65.8
GSVIVG01009189001 Vitis vinifera HOM05D000611 ORTHO05D007148 5.0e-33 145.6 138 58.0
Gohir.A05G219100 Gossypium hirsutum HOM05D000611 ORTHO05D007148 6.5e-33 145.2 113 67.3
CSS0013456 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D007148 1.5e-32 144.1 224 44.2
Gorai.009G229100 Gossypium raimondii HOM05D000611 ORTHO05D007148 2.5e-32 143.3 113 66.4
arahy.Tifrunner.gnm1.ann1.6YZ8WH Arachis hypogaea HOM05D000611 ORTHO05D007148 3.2e-32 142.9 126 62.7
Gohir.D05G221800 Gossypium hirsutum HOM05D000611 ORTHO05D007148 4.2e-32 142.5 113 65.5
Gohir.D06G031200 Gossypium hirsutum HOM05D000611 ORTHO05D007148 7.2e-32 141.7 194 45.9
Gorai.010G034400 Gossypium raimondii HOM05D000611 ORTHO05D007148 7.2e-32 141.7 194 45.9
TWI12G0939 Tripterygium wilfordii HOM05D000611 ORTHO05D007148 1.6e-31 140.6 128 59.4
arahy.Tifrunner.gnm1.ann1.KI5RS7 Arachis hypogaea HOM05D000611 ORTHO05D007148 2.7e-31 139.8 126 61.9
TAR376G1189 Trochodendron aralioides HOM05D000611 ORTHO05D007148 3.6e-31 139.4 270 38.9
Gohir.A06G032000 Gossypium hirsutum HOM05D000611 ORTHO05D007148 4.7e-31 139.0 194 44.8
Lalb_Chr11g0064911 Lupinus albus HOM05D000611 ORTHO05D007148 1.0e-30 137.9 118 62.7
PGR031G1443 Punica granatum HOM05D000611 ORTHO05D007148 5.2e-30 135.6 127 61.4
Rhsim06G0071300 Rhododendron simsii HOM05D000611 ORTHO05D007148 5.7e-29 132.1 223 41.7
Hma1.2p1_0125F.1_g058780 Hydrangea macrophylla HOM05D000611 ORTHO05D007148 9.8e-29 131.3 116 60.3
TWI56G0818 Tripterygium wilfordii HOM05D000611 ORTHO05D007148 9.8e-29 131.3 128 56.2
Lj1g0027819 Lotus japonicus HOM05D000611 ORTHO05D007148 1.3e-28 131.0 141 53.9
Actinidia29627 Actinidia chinensis HOM05D000611 ORTHO05D007148 3.7e-28 129.4 225 42.7
TAR381G0104 Trochodendron aralioides HOM05D000611 ORTHO05D007148 6.3e-28 128.6 285 36.5
Psat5g049240 Pisum sativum HOM05D000611 ORTHO05D007148 8.3e-28 128.3 127 57.5
SHI20477 Sapria himalayana HOM05D000611 ORTHO05D007148 1.8e-27 127.1 110 59.1
ClCG08G011620 Citrullus lanatus HOM05D000611 ORTHO05D007148 9.1e-27 124.8 112 60.7
Cc10_g15960 Coffea canephora HOM05D000611 ORTHO05D007148 2.0e-26 123.6 177 45.2
MELO3C011081.2 Cucumis melo HOM05D000611 ORTHO05D007148 4.5e-26 122.5 246 39.4
CsaV3_2G030190 Cucumis sativus L. HOM05D000809 ORTHO05D007148 5.9e-26 122.1 106 62.3
Ca_16008_v3 Cicer arietinum L. HOM05D000611 ORTHO05D007148 7.7e-26 121.7 141 51.8
Nn5g27540 Nelumbo nucifera HOM05D000611 ORTHO05D007148 7.7e-26 121.7 106 64.2
MSTRG.18759 Avicennia marina HOM05D000611 ORTHO05D007148 1.3e-25 120.9 111 60.4
Hma1.2p1_0125F.1_g058793 Hydrangea macrophylla HOM05D000611 ORTHO05D007148 2.3e-25 120.2 116 55.2
Hma1.2p1_0125F.1_g058800 Hydrangea macrophylla HOM05D000611 ORTHO05D007148 2.3e-25 120.2 116 55.2
Sed0014831 Sechium edule HOM05D000611 ORTHO05D007148 2.9e-25 119.8 232 39.2
SalBow6G1148 Salvia bowleyana HOM05D000611 ORTHO05D007148 3.8e-25 119.4 140 49.3
CARHR009670 Cardamine hirsuta HOM05D000611 ORTHO05D007148 5.0e-25 119.0 165 46.7
A06p06380 Brassica napus HOM05D000611 ORTHO05D007148 6.6e-25 118.6 143 49.0
Medtr3g100120 Medicago truncatula HOM05D000611 ORTHO05D007148 6.6e-25 118.6 127 53.5
Sp1g08290 Schrenkiella parvula HOM05D000611 ORTHO05D007148 8.6e-25 118.2 164 43.9
TAR625G0735 Trochodendron aralioides HOM05D000611 ORTHO05D007148 8.6e-25 118.2 187 44.4
Aqoxy5G01370 Aquilegia oxysepala HOM05D000611 ORTHO05D007148 2.5e-24 116.7 227 39.2
C05p07780 Brassica napus HOM05D000611 ORTHO05D007148 3.3e-24 116.3 117 55.6
BolC5t29529H Brassica oleracea HOM05D000611 ORTHO05D007148 3.3e-24 116.3 117 55.6
MSTRG.21040 Avicennia marina HOM05D000611 ORTHO05D007148 4.2e-24 115.9 116 55.2
A08p34400 Brassica napus HOM05D000611 ORTHO05D007148 4.2e-24 115.9 114 53.5
AT1G09700 Arabidopsis thaliana HOM05D000611 ORTHO05D007148 7.2e-24 115.2 116 55.2
BraA08t35352Z Brassica rapa HOM05D000611 ORTHO05D007148 9.5e-24 114.8 111 54.1
vmacro21343 Vaccinium macrocarpon HOM05D000611 ORTHO05D007148 1.2e-23 114.4 120 56.7
Ah.07g200040 Amaranthus hybridus HOM05D000611 ORTHO05D007148 1.6e-23 114.0 232 37.5
C08p13130 Brassica napus HOM05D000611 ORTHO05D007148 2.8e-23 113.2 111 53.2
BolC8t48941H Brassica oleracea HOM05D000611 ORTHO05D007148 2.8e-23 113.2 111 53.2
MBI16_g12476_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D007148 2.8e-23 113.2 110 60.0
TPR.G6365 Trifolium pratense HOM05D000611 ORTHO05D007148 3.6e-23 112.8 108 56.5
BraA06t23849Z Brassica rapa HOM05D000611 ORTHO05D007148 8.0e-23 111.7 161 47.8
FAN13G1678 Fragaria x ananassa HOM05D000611 ORTHO05D007148 1.0e-22 111.3 173 42.8
Hund26765 Selenicereus undatus HOM05D000611 ORTHO05D007148 1.0e-22 111.3 124 50.8
Thhalv10009442m.g Eutrema salsugineum HOM05D000611 ORTHO05D007148 1.4e-22 110.9 116 52.6
EL10Ac5g12190 Beta vulgaris HOM05D000611 ORTHO05D007148 1.8e-22 110.5 126 54.0
unitig_37.g12895 Utricularia gibba HOM05D000611 ORTHO05D007148 4.0e-22 109.4 122 48.4
FAN18G2075 Fragaria x ananassa HOM05D000611 ORTHO05D007148 5.2e-22 109.0 173 42.2
AL1G20250 Arabidopsis lyrata HOM05D000611 ORTHO05D007148 6.8e-22 108.6 160 45.0
Lj4A87T46 Lonicera japonica HOM05D000611 ORTHO05D007148 6.8e-22 108.6 136 50.0
Aa31LG1G5290 Aethionema arabicum HOM05D000611 ORTHO05D007148 8.9e-22 108.2 113 54.0
RcHm_v2.0_Chr7g0236301 Rosa chinensis HOM05D000611 ORTHO05D007148 8.9e-22 108.2 100 56.0
FvH4_5g35180 Fragaria vesca HOM05D000611 ORTHO05D007148 1.2e-21 107.8 173 41.6
THA.LOC104816793 Tarenaya hassleriana HOM05D000611 ORTHO05D007148 1.2e-21 107.8 111 55.9
AUR62007234 Chenopodium quinoa HOM05D000611 ORTHO05D007148 1.5e-21 107.5 182 40.1
AUR62018766 Chenopodium quinoa HOM05D000611 ORTHO05D007148 3.4e-21 106.3 184 39.1
FAN08G1902 Fragaria x ananassa HOM05D000611 ORTHO05D007148 3.4e-21 106.3 246 34.1
Eucgr.B01706 Eucalyptus grandis HOM05D000611 ORTHO05D007148 9.8e-21 104.8 86 66.3
Eucgr.B01707 Eucalyptus grandis HOM05D000611 ORTHO05D007148 1.3e-20 104.4 85 67.1
Oeu035437.1 Olea europaea HOM05D000611 ORTHO05D007148 1.3e-20 104.4 114 51.8
CAN.G475.15 Capsicum annuum HOM05D000611 ORTHO05D007148 2.8e-20 103.2 123 51.2
SGA_v2.0_scaffold22G09861 Striga asiatica HOM05D000611 ORTHO05D007148 3.7e-20 102.8 105 56.2
Oeu002374.1 Olea europaea HOM05D000611 ORTHO05D007148 4.9e-20 102.4 166 42.2
Nitab4.5_0000131g0140 Nicotiana tabacum HOM05D000611 ORTHO05D007148 1.4e-19 100.9 145 46.9
Migut.D02444 Erythranthe guttata HOM05D000611 ORTHO05D007148 2.4e-19 100.1 99 53.5
Nitab4.5_0006151g0040 Nicotiana tabacum HOM05D000611 ORTHO05D007148 4.1e-19 99.4 147 45.6
PSO170G2977 Papaver somniferum HOM05D000611 ORTHO05D007148 5.4e-19 99.0 111 51.4
HanXRQChr02g0046201 Helianthus annuus HOM05D000611 ORTHO05D007148 9.2e-19 98.2 113 51.3
SGA_v2.0_scaffold147G36386 Striga asiatica HOM05D000611 ORTHO05D007148 9.2e-19 98.2 79 67.1
PSO210G3554 Papaver somniferum HOM05D000611 ORTHO05D007148 1.2e-18 97.8 111 51.4
Actinidia19625 Actinidia chinensis HOM05D000611 ORTHO05D007148 2.0e-18 97.1 213 38.5
Carub.0001s0904 Capsella rubella HOM05D000611 ORTHO05D007148 2.0e-18 97.1 131 45.0
DCAR_019319 Daucus carota HOM05D000611 ORTHO05D007148 4.5e-18 95.9 107 54.2
Os05g0307400 Oryza sativa ssp. japonica HOM05D000611 ORTHO05D007148 7.8e-18 95.1 111 56.8
ECA247G2790 Erigeron canadensis HOM05D000611 ORTHO05D007148 1.7e-17 94.0 115 51.3
Os12g0109900 Oryza sativa ssp. japonica HOM05D000611 ORTHO05D007148 1.7e-17 94.0 111 55.9
PGSC0003DMG400009356 Solanum tuberosum HOM05D000611 ORTHO05D007148 2.9e-17 93.2 144 44.4
Os11g0109900 Oryza sativa ssp. japonica HOM05D000611 ORTHO05D007148 3.9e-17 92.8 111 55.9
CDE02G1665 Ceratophyllum demersum HOM05D000611 ORTHO05D007148 6.6e-17 92.0 118 49.2
Sc04g0005040 Simmondsia chinensis HOM05D000611 ORTHO05D007148 6.6e-17 92.0 81 58.0
Solyc04g076420.4 Solanum lycopersicum HOM05D000611 ORTHO05D007148 6.6e-17 92.0 109 49.5
Sopen04g030180 Solanum pennellii HOM05D000611 ORTHO05D007148 6.6e-17 92.0 109 49.5
Lsat_1_v5_gn_1_1860 Lactuca sativa HOM05D000611 ORTHO05D007148 1.9e-16 90.5 89 57.3
Peaxi162Scf00454g00226 Petunia axillaris HOM05D000611 ORTHO05D007148 7.3e-16 88.6 215 35.3
Zm00001eb094000 Zea mays HOM05D000611 ORTHO05D007148 2.1e-15 87.0 111 53.2
HPP92_011381 Vanilla planifolia HOM05D000611 ORTHO05D007148 2.8e-15 86.7 119 50.4
ATR0767G065 Amborella trichopoda HOM05D000611 ORTHO05D007148 1.4e-14 84.3 112 49.1
Migut.D02443 Erythranthe guttata HOM05D000611 ORTHO05D189914 2.3e-14 83.6 121 45.5
SMO171G0094 Selaginella moellendorffii HOM05D000611 ORTHO05D007148 2.8e-07 60.1 55 52.7
Pp3c17_2200 Physcomitrium patens HOM05D000611 ORTHO05D007148 3.6e-07 59.7 60 58.3
Mapoly0146s0045 Marchantia polymorpha HOM05D000611 ORTHO05D007148 4.7e-07 59.3 64 46.9
AagrBONN_evm.TU.Sc2ySwM_117.1926 Anthoceros agrestis HOM05D000611 ORTHO05D007148 8.0e-07 58.5 116 37.9
SEGI_24368 Sequoiadendron giganteum HOM05D000611 ORTHO05D007148 8.9e-06 55.1 64 46.9


User provided reference genes

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