Gene: Os11g0109900
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os11g0109900
- Transcript Identifier Os11t0109900-01
- Gene Type Coding gene
- Location chr11 : 457519-461595 : negative
Gene Family Information
- ID HOM05D000611
- #Genes/#Species 929/97
- Phylogenetic origin
- ID ORTHO05D007148
- #Genes/#Species 134/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os11t0109900-01
- MSU-ID LOC_Os11g01869.1
- MSU-ID LOC_Os11g01869.2
- uniprot Q0IV63
Descriptions
- Description Double-stranded RNA-binding-like domain containing protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010267 | ISO | PLAZA Integrative Orthology | production of ta-siRNAs involved in RNA interference | AT1G09700 |
| GO:0035279 | ISO | PLAZA Integrative Orthology | mRNA cleavage involved in gene silencing by miRNA | AT1G09700 |
| GO:0010305 | ISO | PLAZA Integrative Orthology | leaf vascular tissue pattern formation | AT1G09700 |
| GO:0010589 | ISO | PLAZA Integrative Orthology | leaf proximal/distal pattern formation | AT1G09700 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G09700 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT1G09700 |
| GO:0009735 | ISO | PLAZA Integrative Orthology | response to cytokinin | AT1G09700 |
| GO:0035196 | ISO | PLAZA Integrative Orthology | production of miRNAs involved in gene silencing by miRNA | AT1G09700 |
| GO:0031054 | ISO | PLAZA Integrative Orthology | pre-miRNA processing | AT1G09700 |
| GO:0090501 | IEA | GOA Database | RNA phosphodiester bond hydrolysis | |
| GO:0016075 | IEA | GOA Database | rRNA catabolic process | |
| GO:0016075 | IEA | InterPro | rRNA catabolic process | |
| GO:0010468 | IBA | GOA Database | regulation of gene expression | |
| GO:0006396 | IBA | GOA Database | RNA processing | |
| GO:0090502 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, endonucleolytic |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0035198 | ISO | PLAZA Integrative Orthology | miRNA binding | AT1G09700 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G09700 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT1G09700 |
| GO:0004525 | IBA IEA | GOA Database | ribonuclease III activity | |
| GO:0004525 | IEA | InterPro | ribonuclease III activity | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003725 | IBA | GOA Database | double-stranded RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010445 | ISO | PLAZA Integrative Orthology | nuclear dicing body | AT1G09700 |
| GO:0015030 | ISO | PLAZA Integrative Orthology | Cajal body | AT1G09700 |
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.9.2.1.2 | RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.component HYL1 |