Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 2.5e-192 675.2 337 100.0
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 1.5e-136 490.0 373 65.1
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 2.6e-136 489.2 372 65.1
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 2.6e-136 489.2 372 65.1
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 3.7e-135 485.3 372 64.8
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 1.4e-134 483.4 369 66.4
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 1.8e-134 483.0 372 64.2
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 7.0e-134 481.1 371 64.7
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 2.6e-133 479.2 377 63.4
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 5.9e-133 478.0 375 63.7
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 7.7e-133 477.6 373 63.5
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 7.7e-133 477.6 372 63.4
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 5.0e-132 474.9 393 60.6
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 7.2e-131 471.1 371 63.3
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 3.6e-130 468.8 373 62.7
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 1.4e-129 466.8 373 63.8
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 2.3e-129 466.1 371 63.9
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 3.0e-129 465.7 368 62.8
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 6.8e-129 464.5 370 61.4
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 8.8e-129 464.2 368 63.3
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.0e-128 463.0 372 63.2
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.6e-128 462.6 372 63.2
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 3.4e-128 462.2 375 60.8
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 1.3e-127 460.3 371 61.2
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 6.3e-127 458.0 374 60.7
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 6.3e-127 458.0 375 60.5
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 1.1e-126 457.2 365 63.8
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.1e-126 457.2 367 63.8
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 3.1e-126 455.7 366 62.3
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 4.1e-126 455.3 363 59.8
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 5.4e-126 454.9 371 60.6
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 9.1e-126 454.1 374 58.8
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 1.2e-125 453.8 367 61.3
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 2.0e-125 453.0 365 63.0
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 2.7e-125 452.6 366 61.5
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 3.5e-125 452.2 374 59.9
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 7.7e-125 451.1 374 59.4
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 2.2e-124 449.5 371 60.4
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.1e-123 447.2 364 59.9
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 1.5e-123 446.8 373 60.1
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 1.9e-123 446.4 379 58.6
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 2.5e-123 446.0 365 61.4
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 5.5e-123 444.9 373 59.8
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 1.2e-122 443.7 359 61.3
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 4.0e-121 438.7 372 59.9
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 5.2e-121 438.3 371 60.4
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 2.6e-120 436.0 364 60.7
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 4.4e-120 435.3 366 58.7
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 5.7e-120 434.9 375 57.1
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 9.8e-120 434.1 372 59.1
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 9.8e-120 434.1 367 58.9
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 1.3e-119 433.7 365 62.5
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 3.7e-119 432.2 368 59.5
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 9.1e-118 427.6 376 59.0
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 9.1e-118 427.6 341 63.0
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 2.0e-117 426.4 407 56.0
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 2.0e-117 426.4 365 56.4
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 1.7e-116 423.3 342 60.5
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 2.3e-116 422.9 343 61.2
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 2.3e-116 422.9 395 56.5
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 3.8e-116 422.2 354 58.8
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 6.6e-116 421.4 356 58.1
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 8.6e-116 421.0 370 57.3
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 1.9e-115 419.9 399 55.6
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 3.3e-115 419.1 370 56.2
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 7.2e-115 417.9 293 67.6
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 1.2e-114 417.2 370 57.3
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 4.7e-114 415.2 370 56.2
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 3.0e-113 412.5 367 56.7
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 5.2e-113 411.8 370 56.5
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 6.8e-113 411.4 370 56.5
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 6.8e-113 411.4 370 56.2
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 6.8e-113 411.4 370 55.9
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 1.2e-112 410.6 371 57.1
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 1.5e-112 410.2 370 55.4
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 3.4e-112 409.1 370 56.2
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 3.4e-112 409.1 410 52.7
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 1.3e-111 407.1 362 57.5
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 2.2e-111 406.4 364 56.0
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 7.0e-110 401.4 364 55.8
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 7.0e-110 401.4 375 55.2
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 2.7e-109 399.4 349 57.0
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 2.3e-108 396.4 327 63.9
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.1e-107 394.0 292 65.8
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 1.6e-106 390.2 336 59.5
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.0e-105 387.5 354 58.8
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 5.2e-105 385.2 380 54.7
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 5.8e-104 381.7 370 52.4
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 4.9e-103 378.6 367 54.5
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 1.4e-102 377.1 382 52.4
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.3e-100 370.5 384 53.4
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 8.6e-100 367.9 372 53.5
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 1.5e-99 367.1 380 51.8
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 9.2e-94 347.8 348 52.9
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 8.6e-92 341.3 289 56.1
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 5.6e-91 338.6 311 54.7
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 4.7e-90 335.5 363 47.9
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 8.4e-87 324.7 355 51.5
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 5.3e-73 278.9 376 43.9
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 2.4e-62 243.4 188 62.2
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 8.7e-60 235.0 154 69.5
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 1.1e-49 201.4 270 45.6
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 1.6e-45 187.6 155 60.6
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 2.3e-44 183.7 126 63.5
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 2.0e-40 170.6 157 56.1
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 1.0e-39 168.3 369 31.7
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 2.2e-39 167.2 150 56.7
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 1.0e-31 141.7 140 51.4
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 8.5e-31 138.7 131 51.9
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 1.2e-24 118.2 419 27.2
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 2.2e-23 114.0 70 75.7
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 2.0e-16 90.9 109 41.3
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 1.5e-14 84.7 106 43.4
COL.COLO4_27080 Corchorus olitorius HOM05D006688 ORTHO05D008550 6.3e-10 69.3 68 52.9
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 3.1e-09 67.0 50 58.0
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 7.0e-09 65.9 38 65.8
BcaB07g31609 Brassica carinata HOM05D006688 ORTHO05D008550 1.2e-08 65.1 103 40.8
FAN10G1082 Fragaria x ananassa HOM05D001335 ORTHO05D001184 9.5e-06 55.5 132 27.3


User provided reference genes

Program Settings