Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 6.3e-227 790.4 393 100.0
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 4.6e-153 545.0 379 74.4
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 5.1e-144 515.0 366 72.7
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 2.1e-142 509.6 355 73.0
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 1.9e-138 496.5 373 67.0
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.6e-137 493.4 333 71.2
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 3.0e-136 489.2 325 72.3
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 1.9e-135 486.5 344 69.8
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 2.1e-134 483.0 368 65.2
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 8.1e-134 481.1 316 72.8
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 8.1e-134 481.1 328 70.7
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.4e-133 480.3 301 77.1
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 5.3e-133 478.4 361 65.9
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 9.0e-133 477.6 305 74.4
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 1.5e-132 476.9 398 62.6
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 4.5e-132 475.3 330 69.7
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 1.3e-131 473.8 361 65.4
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.2e-131 473.0 346 67.9
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.9e-130 469.9 337 69.1
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 2.4e-130 469.5 347 66.0
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 4.2e-130 468.8 371 63.9
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 5.5e-130 468.4 312 70.2
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 5.5e-130 468.4 325 70.2
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 5.5e-130 468.4 361 64.8
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 5.5e-130 468.4 377 63.1
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 7.1e-130 468.0 377 63.1
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 1.2e-129 467.2 361 64.8
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 1.2e-129 467.2 360 65.6
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 2.1e-129 466.5 372 62.6
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 2.1e-129 466.5 336 67.9
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 3.5e-129 465.7 374 63.6
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 6.0e-129 464.9 367 63.2
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 6.0e-129 464.9 354 64.1
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 7.9e-129 464.5 317 67.8
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.3e-128 463.8 360 64.7
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 2.3e-128 463.0 382 62.6
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 3.0e-128 462.6 375 63.2
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 8.7e-128 461.1 363 63.9
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 1.1e-127 460.7 321 69.2
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 1.1e-127 460.7 405 60.2
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 5.6e-127 458.4 321 68.5
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 1.3e-126 457.2 379 60.9
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 1.6e-126 456.8 321 69.5
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 2.1e-126 456.4 323 67.8
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 3.7e-126 455.7 310 69.0
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 4.8e-126 455.3 346 63.9
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 6.2e-126 454.9 310 69.4
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.1e-125 454.1 354 64.1
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 1.8e-125 453.4 361 63.2
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.8e-125 453.4 317 66.6
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 3.1e-125 452.6 352 63.6
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 3.1e-125 452.6 315 67.9
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 4.0e-125 452.2 366 59.8
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 2.6e-124 449.5 357 62.7
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 4.5e-124 448.7 374 62.0
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 7.6e-124 448.0 349 62.8
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 3.8e-123 445.7 362 63.3
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 4.9e-123 445.3 309 67.3
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 1.4e-122 443.7 317 66.6
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 2.1e-121 439.9 370 60.5
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 6.0e-121 438.3 361 62.3
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 2.5e-119 433.0 311 64.3
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 3.3e-119 432.6 319 65.2
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 3.7e-118 429.1 326 62.3
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 4.8e-118 428.7 303 66.3
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 1.8e-117 426.8 316 63.9
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 2.4e-117 426.4 303 66.0
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 6.9e-117 424.9 304 65.5
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 1.5e-116 423.7 316 65.2
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 2.0e-116 423.3 304 65.8
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 2.6e-116 422.9 304 66.1
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 2.6e-116 422.9 321 62.6
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 5.9e-116 421.8 347 59.9
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 7.6e-116 421.4 303 65.3
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 2.9e-115 419.5 327 61.2
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 5.0e-115 418.7 317 64.0
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 1.4e-114 417.2 305 65.6
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 1.9e-114 416.8 305 65.6
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 4.2e-114 415.6 369 56.1
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 5.5e-114 415.2 375 56.5
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 7.2e-114 414.8 391 61.1
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 2.7e-113 412.9 272 71.7
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 4.6e-113 412.1 378 58.5
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 1.4e-106 390.6 358 55.9
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 4.6e-105 385.6 323 58.8
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 4.6e-105 385.6 323 58.8
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 9.7e-103 377.9 294 65.0
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.8e-101 373.6 261 68.2
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 3.1e-101 372.9 296 64.5
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 4.1e-101 372.5 379 52.8
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 8.5e-99 364.8 309 59.5
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 8.5e-99 364.8 316 55.1
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 4.2e-98 362.5 292 63.7
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 5.5e-98 362.1 356 50.6
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 5.2e-96 355.5 304 60.9
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 4.4e-95 352.4 336 54.2
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 3.1e-93 346.3 236 69.1
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 1.6e-92 344.0 313 53.7
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 1.4e-88 330.9 368 50.3
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 1.3e-83 314.3 364 47.5
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 4.8e-78 295.8 191 71.7
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 2.3e-72 276.9 184 68.5
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 9.8e-71 271.6 260 55.4
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 1.4e-69 267.7 170 72.9
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 3.5e-68 263.1 172 70.9
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 2.5e-66 256.9 167 75.4
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 5.2e-64 249.2 368 39.1
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 1.5e-63 247.7 417 36.7
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 2.6e-55 220.3 135 72.6
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 6.2e-49 199.1 207 52.7
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 5.6e-42 176.0 131 67.9
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 7.1e-29 132.5 96 65.6
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 2.0e-23 114.4 305 29.5
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 1.9e-18 97.8 184 37.5
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 4.8e-17 93.2 57 73.7
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 1.8e-16 91.3 51 76.5
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 3.3e-10 70.5 147 29.9
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 9.6e-10 68.9 191 26.7
CARHR156520 Cardamine hirsuta HOM05D007129 ORTHO05D008680 1.2e-07 62.0 73 47.9
Thhalv10010580m.g Eutrema salsugineum HOM05D007129 ORTHO05D008680 1.5e-07 61.6 73 47.9
AL5G27120 Arabidopsis lyrata HOM05D007129 ORTHO05D008680 4.5e-07 60.1 55 54.5
AT3G47830 Arabidopsis thaliana HOM05D007129 ORTHO05D008680 4.5e-07 60.1 55 56.4
A01p25760 Brassica napus HOM05D007129 ORTHO05D008680 1.0e-06 58.9 55 52.7
BolC1t03194H Brassica oleracea HOM05D007129 ORTHO05D008680 1.0e-06 58.9 55 52.7
BraA01t02492Z Brassica rapa HOM05D007129 ORTHO05D008680 1.0e-06 58.9 55 52.7
Sp5g14130 Schrenkiella parvula HOM05D007129 ORTHO05D008680 1.0e-06 58.9 55 54.5
BcaB05g23081 Brassica carinata HOM05D007129 ORTHO05D008680 1.3e-06 58.5 55 52.7
BcaNung06176 Brassica carinata HOM05D007129 ORTHO05D008680 1.3e-06 58.5 55 52.7
SalBow6G7050 Salvia bowleyana HOM05D007129 ORTHO05D008680 1.3e-06 58.5 70 47.1
COL.COLO4_04322 Corchorus olitorius HOM05D002131 ORTHO05D008680 1.7e-06 58.2 113 35.4
PRCOL_00005231 Prasinoderma coloniale HOM05D007129 ORTHO05D008680 1.7e-06 58.2 140 31.4
THA.LOC104821441 Tarenaya hassleriana HOM05D007129 ORTHO05D008680 2.2e-06 57.8 55 50.9
Carub.0005s1394 Capsella rubella HOM05D007129 ORTHO05D008680 3.8e-06 57.0 73 43.8
Peaxi162Scf00017g02522 Petunia axillaris HOM05D007129 ORTHO05D008680 4.9e-06 56.6 115 35.7


User provided reference genes

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