Gene: AT3G47830

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G47830
  • Transcript Identifier AT3G47830.1
  • Gene Type Coding gene
  • Location Chr3 : 17647069-17648346 : positive

Gene Family Information

  • ID HOM05D007129
  • #Genes/#Species 111/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G47830.1
  • uniprot F4JCQ3

Descriptions

  • Description DNA glycosylase superfamily protein
  • Computational description DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 4804 Blast hits to 4804 proteins in 1691 species: Archae - 231; Bacteria - 3044; Metazoa - 109; Fungi - 99; Plants - 198; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006284
IEA
Gene Ontologybase-excision repair
GO:0006284
IEA
InterProbase-excision repair
GO:0008152
IEA
GOA Databasemetabolic process
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003265 HhH-GPD domain
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR011257 DNA glycosylase
Mapman id Description
35.1 not assigned.annotated