Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1833 Erigeron canadensis HOM05D001184 ORTHO05D019511 4.4e-52 207.6 99 100.0
ECA247G2182 Erigeron canadensis HOM05D001184 ORTHO05D003397 7.3e-15 84.0 51 82.4
TWI18G0923 Tripterygium wilfordii HOM05D001184 ORTHO05D003397 2.8e-14 82.0 51 72.5
TAR633G0494 Trochodendron aralioides HOM05D001184 ORTHO05D003397 4.7e-14 81.3 51 74.5
Sopen07g004890 Solanum pennellii HOM05D001184 ORTHO05D003397 1.4e-13 79.7 52 76.9
PGSC0003DMG400028753 Solanum tuberosum HOM05D001184 ORTHO05D003397 1.8e-13 79.3 52 76.9
TWI12G1242 Tripterygium wilfordii HOM05D001184 ORTHO05D003397 1.8e-13 79.3 51 70.6
Manes.15G055300 Manihot esculenta HOM05D001184 ORTHO05D003397 3.1e-13 78.6 51 70.6
vmacro11026 Vaccinium macrocarpon HOM05D001184 ORTHO05D003397 3.1e-13 78.6 51 72.5
Lsat_1_v5_gn_2_46341 Lactuca sativa HOM05D001184 ORTHO05D003397 4.0e-13 78.2 51 76.5
Nitab4.5_0000366g0090 Nicotiana tabacum HOM05D001184 ORTHO05D003397 6.8e-13 77.4 52 76.9
Rhsim02G0172200 Rhododendron simsii HOM05D001184 ORTHO05D003397 6.8e-13 77.4 51 72.5
Lsat_1_v5_gn_6_60760 Lactuca sativa HOM05D001184 ORTHO05D003397 8.9e-13 77.0 51 74.5
Hma1.2p1_0187F.1_g082410 Hydrangea macrophylla HOM05D001184 ORTHO05D003397 1.2e-12 76.6 51 72.5
Lj7C738G14 Lonicera japonica HOM05D000109 ORTHO05D000210 1.2e-12 76.6 51 76.5
ClCG06G008040 Citrullus lanatus HOM05D001184 ORTHO05D003397 3.4e-12 75.1 51 72.5
Haze_24837 Corylus avellana HOM05D001184 ORTHO05D003397 3.4e-12 75.1 53 69.8
Prupe.1G159500 Prunus persica HOM05D001184 ORTHO05D003397 3.4e-12 75.1 51 70.6
HPP92_023535 Vanilla planifolia HOM05D001184 ORTHO05D003397 3.4e-12 75.1 36 91.7
Cc03_g08090 Coffea canephora HOM05D001184 ORTHO05D003397 4.4e-12 74.7 51 70.6
HanXRQChr15g0488241 Helianthus annuus HOM05D001184 ORTHO05D003397 4.4e-12 74.7 51 74.5
Nn3g19994 Nelumbo nucifera HOM05D001184 ORTHO05D003397 4.4e-12 74.7 51 70.6
Ciclev10024095m.g Citrus clementina HOM05D001184 ORTHO05D003397 5.8e-12 74.3 51 70.6
Dinv38206 Davidia involucrata HOM05D001184 ORTHO05D003397 5.8e-12 74.3 51 74.5
Peaxi162Scf00324g00227 Petunia axillaris HOM05D001184 ORTHO05D003397 5.8e-12 74.3 51 68.6
Prupe.2G130800 Prunus persica HOM05D001184 ORTHO05D003397 5.8e-12 74.3 51 68.6
CiPaw.03G146700 Carya illinoinensis HOM05D001184 ORTHO05D003397 7.5e-12 73.9 43 76.7
Nitab4.5_0002889g0080 Nicotiana tabacum HOM05D001184 ORTHO05D003397 7.5e-12 73.9 41 80.5
Nitab4.5_0009377g0030 Nicotiana tabacum HOM05D001184 ORTHO05D003397 7.5e-12 73.9 41 80.5
PSO339G1617 Papaver somniferum HOM05D001184 ORTHO05D003397 7.5e-12 73.9 43 74.4
Sed0003636 Sechium edule HOM05D001184 ORTHO05D003397 7.5e-12 73.9 51 70.6
Atru.chr4.1616 Acer truncatum HOM05D001184 ORTHO05D003397 9.9e-12 73.6 43 76.7
COL.COLO4_20192 Corchorus olitorius HOM05D001184 ORTHO05D003397 9.9e-12 73.6 41 78.0
Duzib268G0787 Durio zibethinus HOM05D001184 ORTHO05D003397 9.9e-12 73.6 41 80.5
CDE06G0050 Ceratophyllum demersum HOM05D001184 ORTHO05D003397 1.3e-11 73.2 36 88.9
CDE08G1095 Ceratophyllum demersum HOM05D001184 ORTHO05D003397 1.3e-11 73.2 36 88.9
Haze_24834 Corylus avellana HOM05D001184 ORTHO05D003397 1.3e-11 73.2 43 76.7
Nn1g07935 Nelumbo nucifera HOM05D001184 ORTHO05D003397 1.3e-11 73.2 51 70.6
Sp7g11570 Schrenkiella parvula HOM05D001184 ORTHO05D003397 1.3e-11 73.2 36 88.9
Actinidia03536 Actinidia chinensis HOM05D001184 ORTHO05D003397 1.7e-11 72.8 51 70.6
AT4G13780 Arabidopsis thaliana HOM05D001184 ORTHO05D003397 1.7e-11 72.8 40 80.0
arahy.Tifrunner.gnm1.ann1.28RW3P Arachis hypogaea HOM05D001184 ORTHO05D003397 1.7e-11 72.8 39 87.2
arahy.Tifrunner.gnm1.ann1.P6K76F Arachis hypogaea HOM05D001184 ORTHO05D003397 1.7e-11 72.8 39 87.2
Cfa002591 Carpinus fangiana HOM05D001184 ORTHO05D003397 1.7e-11 72.8 57 63.2
MD05G1172700 Malus domestica HOM05D001184 ORTHO05D003397 1.7e-11 72.8 49 69.4
RcHm_v2.0_Chr4g0414311 Rosa chinensis HOM05D001184 ORTHO05D003397 1.7e-11 72.8 51 64.7
Actinidia29359 Actinidia chinensis HOM05D001184 ORTHO05D003397 2.2e-11 72.4 51 70.6
AL7G42740 Arabidopsis lyrata HOM05D001184 ORTHO05D003397 2.2e-11 72.4 40 80.0
A08p06650 Brassica napus HOM05D001184 ORTHO05D003397 2.2e-11 72.4 42 76.2
BraA08t32681Z Brassica rapa HOM05D001184 ORTHO05D003397 2.2e-11 72.4 42 76.2
Lj3g0023242 Lotus japonicus HOM05D001184 ORTHO05D003397 2.2e-11 72.4 36 91.7
Potri.017G057700 Populus trichocarpa HOM05D001184 ORTHO05D003397 2.2e-11 72.4 41 80.5
Sabra17G0050800 Salix brachista HOM05D001184 ORTHO05D003397 2.2e-11 72.4 41 80.5
CARHR219660 Cardamine hirsuta HOM05D001184 ORTHO05D003397 2.9e-11 72.0 42 76.2
Oeu049043.1 Olea europaea HOM05D001184 ORTHO05D003397 2.9e-11 72.0 51 70.6
Sed0027305 Sechium edule HOM05D001184 ORTHO05D003397 2.9e-11 72.0 43 74.4
SEGI_18693 Sequoiadendron giganteum HOM05D001184 ORTHO05D003397 2.9e-11 72.0 34 94.1
Thecc.04G199200 Theobroma cacao HOM05D001184 ORTHO05D003397 2.9e-11 72.0 40 77.5
Zm00001eb008700 Zea mays HOM05D001184 ORTHO05D003397 2.9e-11 72.0 37 83.8
Zm00001eb400100 Zea mays HOM05D001184 ORTHO05D003397 2.9e-11 72.0 37 83.8
CARHR054020 Cardamine hirsuta HOM05D001184 ORTHO05D003397 3.7e-11 71.6 40 80.0
DCAR_026633 Daucus carota HOM05D001184 ORTHO05D003397 3.7e-11 71.6 51 66.7
FAN12G0873 Fragaria x ananassa HOM05D001184 ORTHO05D003397 3.7e-11 71.6 36 86.1
MD04G1013400 Malus domestica HOM05D001184 ORTHO05D003397 3.7e-11 71.6 52 71.2
PSO384G1210 Papaver somniferum HOM05D001184 ORTHO05D003397 3.7e-11 71.6 36 83.3
SalBow8G1842 Salvia bowleyana HOM05D001184 ORTHO05D003397 3.7e-11 71.6 51 66.7
ATR0987G002 Amborella trichopoda HOM05D001184 ORTHO05D003397 4.9e-11 71.2 51 66.7
Aqoxy5G03290 Aquilegia oxysepala HOM05D001184 ORTHO05D003397 4.9e-11 71.2 38 78.9
BcaB02g08652 Brassica carinata HOM05D001184 ORTHO05D003397 4.9e-11 71.2 34 91.2
BcaC02g09391 Brassica carinata HOM05D001184 ORTHO05D003397 4.9e-11 71.2 34 91.2
A04p08440 Brassica napus HOM05D001184 ORTHO05D003397 4.9e-11 71.2 34 91.2
C04p42150 Brassica napus HOM05D001184 ORTHO05D003397 4.9e-11 71.2 34 91.2
BolC4t25796H Brassica oleracea HOM05D001184 ORTHO05D003397 4.9e-11 71.2 34 91.2
BraA04t16533Z Brassica rapa HOM05D001184 ORTHO05D003397 4.9e-11 71.2 34 91.2
Carub.0007s2868 Capsella rubella HOM05D001184 ORTHO05D003397 4.9e-11 71.2 34 91.2
Potri.001G317500 Populus trichocarpa HOM05D001184 ORTHO05D003397 4.9e-11 71.2 34 91.2
Sabra16G0200900 Salix brachista HOM05D001184 ORTHO05D003397 4.9e-11 71.2 34 91.2
Hund18999 Selenicereus undatus HOM05D001184 ORTHO05D003397 4.9e-11 71.2 51 66.7
FAN17G0017 Fragaria x ananassa HOM05D001184 ORTHO05D003397 6.4e-11 70.9 34 88.2
Gohir.D09G199700 Gossypium hirsutum HOM05D001184 ORTHO05D003397 6.4e-11 70.9 41 78.0
Gorai.006G223400 Gossypium raimondii HOM05D001184 ORTHO05D003397 6.4e-11 70.9 41 78.0
PSO339G2903 Papaver somniferum HOM05D001184 ORTHO05D003397 6.4e-11 70.9 36 83.3
vmacro02776 Vaccinium macrocarpon HOM05D001184 ORTHO05D003397 6.4e-11 70.9 43 74.4
Aa31LG9G3750 Aethionema arabicum HOM05D001184 ORTHO05D019511 8.3e-11 70.5 35 88.6
Ca_04924_v3 Cicer arietinum L. HOM05D001184 ORTHO05D003397 8.3e-11 70.5 36 88.9
FAN07G0119 Fragaria x ananassa HOM05D001184 ORTHO05D003397 8.3e-11 70.5 47 70.2
Glyma.12G018300 Glycine max HOM05D001184 ORTHO05D003397 8.3e-11 70.5 36 88.9
TPR.G34293 Trifolium pratense HOM05D001184 ORTHO05D003397 8.3e-11 70.5 36 88.9
CiPaw.02G065500 Carya illinoinensis HOM05D001184 ORTHO05D003397 1.1e-10 70.1 51 72.5
MELO3C020358.2 Cucumis melo HOM05D001184 ORTHO05D003397 1.1e-10 70.1 36 86.1
Duzib212G0797 Durio zibethinus HOM05D001184 ORTHO05D003397 1.1e-10 70.1 41 80.5
Lalb_Chr19g0139901 Lupinus albus HOM05D001184 ORTHO05D003397 1.1e-10 70.1 40 77.5
Medtr4g077700 Medicago truncatula HOM05D001184 ORTHO05D003397 1.1e-10 70.1 36 86.1
Phvul.011G020800 Phaseolus vulgaris HOM05D001184 ORTHO05D003397 1.1e-10 70.1 36 88.9
Zm00001eb189910 Zea mays HOM05D001184 ORTHO05D003397 1.1e-10 70.1 34 88.2
Atru.chr13.1877 Acer truncatum HOM05D001184 ORTHO05D003397 1.4e-10 69.7 37 83.8
AagrBONN_evm.TU.Sc2ySwM_344.2232 Anthoceros agrestis HOM05D001184 ORTHO05D003397 1.4e-10 69.7 46 69.6
AagrBONN_evm.TU.Sc2ySwM_368.2800 Anthoceros agrestis HOM05D001184 ORTHO05D019511 1.4e-10 69.7 38 76.3
CSS0036533 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D003397 1.4e-10 69.7 41 78.0
Cpa.g.sc83.20 Carica papaya HOM05D001184 ORTHO05D003397 1.4e-10 69.7 51 66.7
DCAR_023870 Daucus carota HOM05D001184 ORTHO05D003397 1.4e-10 69.7 36 86.1
MD10G1160800 Malus domestica HOM05D001184 ORTHO05D019511 1.4e-10 69.7 50 66.0
Oeu055765.1 Olea europaea HOM05D001184 ORTHO05D003397 1.4e-10 69.7 43 76.7
RcHm_v2.0_Chr2g0166871 Rosa chinensis HOM05D001184 ORTHO05D003397 1.4e-10 69.7 34 88.2
SalBow8G3376 Salvia bowleyana HOM05D001184 ORTHO05D003397 1.4e-10 69.7 51 64.7
VMungo1127G0354 Vigna mungo HOM05D001184 ORTHO05D003397 1.4e-10 69.7 36 86.1
GSVIVG01020924001 Vitis vinifera HOM05D001184 ORTHO05D003397 1.4e-10 69.7 48 66.7
Migut.O00219 Erythranthe guttata HOM05D001184 ORTHO05D003397 1.9e-10 69.3 51 66.7
Thhalv10024450m.g Eutrema salsugineum HOM05D001184 ORTHO05D003397 1.9e-10 69.3 42 76.2
FvH4_4g13560 Fragaria vesca HOM05D001184 ORTHO05D003397 1.9e-10 69.3 34 85.3
FAN12G0346 Fragaria x ananassa HOM05D001184 ORTHO05D003397 1.9e-10 69.3 34 85.3
FAN22G0763 Fragaria x ananassa HOM05D001184 ORTHO05D003397 1.9e-10 69.3 34 85.3
Prupe.2G130000 Prunus persica HOM05D001184 ORTHO05D003397 1.9e-10 69.3 51 64.7
THA.LOC104804806 Tarenaya hassleriana HOM05D001184 ORTHO05D003397 1.9e-10 69.3 34 88.2
Aa31LG9G3730 Aethionema arabicum HOM05D001184 ORTHO05D003397 2.4e-10 68.9 36 80.6
Ciclev10004343m.g Citrus clementina HOM05D001184 ORTHO05D003397 2.4e-10 68.9 45 71.1
HanXRQChr02g0059041 Helianthus annuus HOM05D001184 ORTHO05D003397 2.4e-10 68.9 36 83.3
SGA_v2.0_scaffold163G38069 Striga asiatica HOM05D001184 ORTHO05D003397 2.4e-10 68.9 33 90.9
SGA_v2.0_scaffold299G47730 Striga asiatica HOM05D001184 ORTHO05D003397 2.4e-10 68.9 33 90.9
THA.LOC104808703 Tarenaya hassleriana HOM05D001184 ORTHO05D003397 2.4e-10 68.9 33 90.9
CANSAT78G2277 Cannabis sativa HOM05D001184 ORTHO05D003397 3.2e-10 68.6 51 66.7
CsaV3_2G011140 Cucumis sativus L. HOM05D001184 ORTHO05D003397 3.2e-10 68.6 51 66.7
Eucgr.H00043 Eucalyptus grandis HOM05D001184 ORTHO05D003397 3.2e-10 68.6 33 87.9
Glyma.12G018400 Glycine max HOM05D001184 ORTHO05D003397 3.2e-10 68.6 34 91.2
PGR142G4368 Punica granatum HOM05D001184 ORTHO05D003397 3.2e-10 68.6 51 66.7
AL1G21770 Arabidopsis lyrata HOM05D001184 ORTHO05D003397 4.1e-10 68.2 34 88.2
unitig_32.g10864 Utricularia gibba HOM05D001184 ORTHO05D003397 4.1e-10 68.2 33 87.9
CBR_g55333 Chara braunii HOM05D001184 ORTHO05D003397 5.4e-10 67.8 58 55.2
Cre02.g087950 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D003397 5.4e-10 67.8 34 85.3
Ah.13g078050 Amaranthus hybridus HOM05D001184 ORTHO05D019511 7.1e-10 67.4 32 90.6
AL2G17960 Arabidopsis lyrata HOM05D001184 ORTHO05D003397 7.1e-10 67.4 40 77.5
Haze_03548 Corylus avellana HOM05D001184 ORTHO05D003397 7.1e-10 67.4 51 66.7
Gohir.A09G206100 Gossypium hirsutum HOM05D001184 ORTHO05D003397 9.2e-10 67.0 41 75.6
Psat4g022000 Pisum sativum HOM05D001184 ORTHO05D003397 9.2e-10 67.0 36 86.1
Psat7g171920 Pisum sativum HOM05D001184 ORTHO05D003397 9.2e-10 67.0 40 82.5
RcHm_v2.0_Chr1g0332221 Rosa chinensis HOM05D001184 ORTHO05D003397 9.2e-10 67.0 33 84.8
GSVIVG01038361001 Vitis vinifera HOM05D001184 ORTHO05D003397 9.2e-10 67.0 43 72.1
Actinidia31465 Actinidia chinensis HOM05D001184 ORTHO05D003397 1.2e-09 66.6 51 64.7
CANSAT01G1772 Cannabis sativa HOM05D001184 ORTHO05D003397 1.2e-09 66.6 35 80.0
AUR62018575 Chenopodium quinoa HOM05D001184 ORTHO05D003397 1.2e-09 66.6 32 87.5
AUR62020841 Chenopodium quinoa HOM05D001184 ORTHO05D003397 1.2e-09 66.6 32 87.5
DCAR_018640 Daucus carota HOM05D001184 ORTHO05D003397 1.2e-09 66.6 33 84.8
MBI06_g27434_MAGBIO Magnolia biondii HOM05D001184 ORTHO05D003397 1.2e-09 66.6 53 64.2
Prupe.8G200100 Prunus persica HOM05D001184 ORTHO05D003397 1.2e-09 66.6 33 87.9
MBI03_g42549_MAGBIO Magnolia biondii HOM05D001184 ORTHO05D003397 1.6e-09 66.2 48 68.8
Manes.13G048000 Manihot esculenta HOM05D001184 ORTHO05D003397 1.6e-09 66.2 42 71.4
TPR.G25404 Trifolium pratense HOM05D001184 ORTHO05D003397 1.6e-09 66.2 36 83.3
AagrBONN_evm.TU.Sc2ySwM_228.3561 Anthoceros agrestis HOM05D001184 ORTHO05D003397 2.1e-09 65.9 38 73.7
Glyma.13G000200 Glycine max HOM05D001184 ORTHO05D003397 2.7e-09 65.5 36 83.3
Sc13g0000260 Simmondsia chinensis HOM05D001184 ORTHO05D003397 2.7e-09 65.5 32 87.5
MSTRG.4233 Avicennia marina HOM05D001184 ORTHO05D003397 3.5e-09 65.1 33 87.9
EL10Ac3g07475 Beta vulgaris HOM05D001184 ORTHO05D003397 3.5e-09 65.1 42 73.8
BcaNung00123 Brassica carinata HOM05D001184 ORTHO05D019511 3.5e-09 65.1 31 90.3
Lalb_Chr01g0000971 Lupinus albus HOM05D001184 ORTHO05D003397 3.5e-09 65.1 36 77.8
Medtr4g122580 Medicago truncatula HOM05D001184 ORTHO05D003397 3.5e-09 65.1 36 80.6
Oeu043455.1 Olea europaea HOM05D001184 ORTHO05D003397 3.5e-09 65.1 33 87.9
PRCOL_00004649 Prasinoderma coloniale HOM05D001184 ORTHO05D003397 3.5e-09 65.1 38 76.3
Mapoly0045s0011 Marchantia polymorpha HOM05D001184 ORTHO05D003397 4.6e-09 64.7 68 51.5
QL10p064653 Quercus lobata HOM05D001184 ORTHO05D003397 4.6e-09 64.7 33 84.8
QL10p065779 Quercus lobata HOM05D001184 ORTHO05D003397 4.6e-09 64.7 33 84.8
EL10Ac1g00236 Beta vulgaris HOM05D001184 ORTHO05D003397 6.0e-09 64.3 33 81.8
Migut.G00631 Erythranthe guttata HOM05D001184 ORTHO05D003397 6.0e-09 64.3 33 84.8
Pp3c13_2300 Physcomitrium patens HOM05D001184 ORTHO05D003397 6.0e-09 64.3 40 70.0
Aa31LG4G12540 Aethionema arabicum HOM05D001184 ORTHO05D003397 7.8e-09 63.9 40 72.5
SHI11900 Sapria himalayana HOM05D001184 ORTHO05D003397 1.3e-08 63.2 56 57.1
HanXRQChr11g0340281 Helianthus annuus HOM05D001184 ORTHO05D019511 3.0e-08 62.0 37 81.1
SalBow3G3036 Salvia bowleyana HOM05D001184 ORTHO05D003397 3.0e-08 62.0 33 84.8
ECA233G0243 Erigeron canadensis HOM05D001184 ORTHO05D003397 5.1e-08 61.2 33 78.8
Os10g0400100 Oryza sativa ssp. japonica HOM05D001184 ORTHO05D003397 5.1e-08 61.2 36 72.2
EL10Ac8g19256 Beta vulgaris HOM05D001184 ORTHO05D003397 6.6e-08 60.8 33 81.8
Cfa022327 Carpinus fangiana HOM05D001184 ORTHO05D003397 6.6e-08 60.8 32 84.4
QL09p052106 Quercus lobata HOM05D001184 ORTHO05D003397 6.6e-08 60.8 33 81.8
QL09p052979 Quercus lobata HOM05D001184 ORTHO05D003397 8.6e-08 60.5 33 78.8
Carub.0007s3400 Capsella rubella HOM05D001184 ORTHO05D003397 1.1e-07 60.1 40 70.0
ATR0987G004 Amborella trichopoda HOM05D001184 ORTHO05D003397 1.9e-07 59.3 31 80.6
CARHR219670 Cardamine hirsuta HOM05D001184 ORTHO05D003397 1.9e-07 59.3 37 70.3
SMO364G0158 Selaginella moellendorffii HOM05D001184 ORTHO05D003397 2.5e-07 58.9 33 78.8
Hund21466 Selenicereus undatus HOM05D001184 ORTHO05D003397 2.5e-07 58.9 31 90.3
Cfa024387 Carpinus fangiana HOM05D001184 ORTHO05D003397 3.3e-07 58.5 32 78.1
EL10Ac6g14498 Beta vulgaris HOM05D001184 ORTHO05D003397 4.3e-07 58.2 33 69.7
Ah.07g201900 Amaranthus hybridus HOM05D001184 ORTHO05D003397 9.5e-07 57.0 37 73.0
Ah.13g069000 Amaranthus hybridus HOM05D001184 ORTHO05D003397 9.5e-07 57.0 37 73.0
AUR62029185 Chenopodium quinoa HOM05D001184 ORTHO05D003397 9.5e-07 57.0 33 75.8
Haze_26590 Corylus avellana HOM05D001184 ORTHO05D003397 4.7e-06 54.7 39 64.1


User provided reference genes

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