Gene: Ah.13g069000
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.13g069000
- Transcript Identifier Ah.13g069000-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_13 : 8589140-8602514 : positive
Gene Family Information
- ID HOM05D001184
- #Genes/#Species 526/100
- Phylogenetic origin
- ID ORTHO05D003397
- #Genes/#Species 226/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.13g069000-v1.1.a1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0006431 | IEA | InterPro | methionyl-tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT4G13780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004825 | IEA | InterPro | methionine-tRNA ligase activity | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0000049 | ISO | PLAZA Homology (enrichment) | tRNA binding | HOM05D001184 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G13780 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008928 | Six-hairpin glycosidase superfamily |
| IPR033911 | Methioninyl-tRNA synthetase core domain |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding |
| IPR029038 | Methionyl-tRNA synthetase, Zn-domain |
| IPR002885 | Pentatricopeptide repeat |
| IPR015413 | Methionyl/Leucyl tRNA synthetase |
| IPR014758 | Methionyl-tRNA synthetase |
| IPR001701 | Glycoside hydrolase family 9 |
| IPR012341 | Six-hairpin glycosidase-like superfamily |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR041872 | Methionyl-tRNA synthetase, anticodon-binding domain |
| Mapman id | Description |
|---|---|
| 17.2.14 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase |