Gene: FAN12G0873
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN12G0873
- Transcript Identifier FAN12G0873.1
- Gene Type Coding gene
- Location Fvb4-3 : 607885-614898 : negative
Gene Family Information
- ID HOM05D001184
- #Genes/#Species 526/100
- Phylogenetic origin
- ID ORTHO05D003397
- #Genes/#Species 226/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id maker-Fvb4-3-snap-gene-6.54.v1.0.a1
- pacid 50476181
Descriptions
- Description PTHR11946//PTHR11946:SF78 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006431 | IEA | InterPro | methionyl-tRNA aminoacylation | |
| GO:0006952 | IEA | InterPro | defense response | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT4G13780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004825 | IEA | InterPro | methionine-tRNA ligase activity | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0000049 | ISO | PLAZA Homology (enrichment) | tRNA binding | HOM05D001184 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G13780 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR033911 | Methioninyl-tRNA synthetase core domain |
| IPR003614 | Knottin, scorpion toxin-like |
| IPR029038 | Methionyl-tRNA synthetase, Zn-domain |
| IPR014758 | Methionyl-tRNA synthetase |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding |
| IPR036574 | Knottin, scorpion toxin-like superfamily |
| IPR041872 | Methionyl-tRNA synthetase, anticodon-binding domain |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR015413 | Methionyl/Leucyl tRNA synthetase |
| Mapman id | Description |
|---|---|
| 17.2.14 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase |
| 26.9.3.2.2 | External stimuli response.pathogen.defense mechanisms.defensin activities.defensin (PDF2) |