Gene: Cc03_g08090
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc03_g08090
- Transcript Identifier Cc03_g08090.1
- Gene Type Coding gene
- Location chr3 : 7825602-7832905 : positive
Gene Family Information
- ID HOM05D001184
- #Genes/#Species 526/100
- Phylogenetic origin
- ID ORTHO05D003397
- #Genes/#Species 226/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB D7SRQ8
- UniProtKB F6GWJ1
- UniProtKB B9N0S4
- UniProtKB Q9ZTS1
- UniProtKB Q9SVN5
- UniProtKB Q54X95
- id GSCOCG00033200001
Descriptions
- Description Probable methionine--tRNA ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0006431 | IEA | InterPro | methionyl-tRNA aminoacylation | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT4G13780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000049 | IEA | InterPro | tRNA binding | |
| GO:0004825 | IEA | InterPro | methionine-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G13780 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015413 | Methionyl/Leucyl tRNA synthetase |
| IPR002547 | tRNA-binding domain |
| IPR041872 | Methionyl-tRNA synthetase, anticodon-binding domain |
| IPR029038 | Methionyl-tRNA synthetase, Zn-domain |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR033911 | Methioninyl-tRNA synthetase core domain |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding |
| IPR014758 | Methionyl-tRNA synthetase |
| Mapman id | Description |
|---|---|
| 17.2.14 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase |