Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 0.0e+00 1779.6 898 100.0
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 0.0e+00 1326.6 899 77.4
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 0.0e+00 1240.7 953 70.4
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 3.4e-276 955.3 940 58.9
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 2.8e-275 952.2 960 57.3
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 1.2e-265 920.2 932 56.0
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 1.6e-265 919.8 975 54.9
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 1.3e-264 916.8 953 56.0
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 8.6e-264 914.1 914 55.8
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 8.9e-261 904.0 908 55.8
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 3.4e-260 902.1 919 55.9
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 1.3e-259 900.2 849 59.1
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 1.3e-259 900.2 911 57.8
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 3.7e-259 898.7 743 65.1
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 4.1e-258 895.2 923 56.8
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 4.1e-258 895.2 923 56.8
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 1.6e-257 893.3 912 56.2
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.3e-256 890.2 925 56.0
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 1.7e-256 889.8 916 55.6
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 3.0e-256 889.0 908 56.1
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 6.6e-256 887.9 920 55.3
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 7.3e-255 884.4 913 55.5
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 1.6e-254 883.2 937 55.5
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.8e-254 882.5 925 55.6
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 4.7e-254 881.7 931 55.2
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 3.1e-253 879.0 922 54.7
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 6.8e-253 877.9 914 55.0
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.2e-252 877.1 928 55.1
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 1.5e-252 876.7 928 54.1
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 2.6e-252 875.9 909 57.6
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 4.4e-252 875.2 927 54.6
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 9.8e-252 874.0 930 54.7
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 1.3e-251 873.6 908 55.5
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 1.9e-250 869.8 903 56.1
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 2.7e-249 865.9 928 55.3
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 1.3e-248 863.6 897 55.0
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 1.9e-247 859.8 906 54.7
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 3.6e-246 855.5 915 54.6
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 8.1e-246 854.4 745 62.8
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 6.8e-245 851.3 819 58.6
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 8.9e-245 850.9 923 54.7
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 2.0e-244 849.7 909 53.6
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 3.4e-244 849.0 890 55.3
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 1.7e-243 846.7 902 54.1
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 2.2e-243 846.3 895 55.0
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 2.2e-243 846.3 1027 50.1
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 2.2e-243 846.3 759 61.7
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 3.8e-243 845.5 756 61.6
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 8.4e-243 844.3 919 53.9
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.1e-242 844.0 921 53.6
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 1.4e-242 843.6 919 55.3
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 1.9e-242 843.2 842 56.7
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 2.4e-242 842.8 906 54.5
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 9.2e-242 840.9 913 54.0
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 1.2e-241 840.5 923 54.4
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 2.1e-241 839.7 923 54.4
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 6.0e-241 838.2 895 54.5
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 2.3e-240 836.3 912 54.6
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 2.3e-240 836.3 936 51.8
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 3.0e-240 835.9 716 63.8
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 3.9e-240 835.5 818 57.3
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 3.9e-240 835.5 924 54.3
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 3.9e-240 835.5 931 52.4
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 5.1e-240 835.1 924 54.3
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 3.3e-239 832.4 817 56.9
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 3.3e-239 832.4 901 53.7
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 4.3e-239 832.0 731 61.4
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 9.6e-239 830.9 902 54.1
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 2.1e-238 829.7 803 58.3
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 6.2e-238 828.2 748 61.9
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 8.9e-237 824.3 831 55.7
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 1.2e-236 823.9 906 54.0
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.7e-235 820.1 910 53.1
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 1.1e-234 817.4 940 51.5
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.9e-234 816.6 924 52.7
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 3.2e-234 815.8 832 55.3
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 2.3e-232 809.7 873 51.7
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 8.7e-232 807.7 828 55.6
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 2.8e-230 802.7 889 52.4
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 7.6e-228 794.7 906 53.5
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 2.4e-226 789.6 916 51.5
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 5.4e-226 788.5 727 59.0
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 3.2e-218 762.7 783 54.8
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 2.1e-217 760.0 756 55.3
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 7.4e-215 751.5 618 64.4
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 2.1e-214 750.0 942 48.3
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 4.5e-212 742.3 809 52.0
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 4.3e-207 725.7 886 49.8
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 1.0e-203 714.5 591 64.5
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 4.1e-197 692.6 883 48.5
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 7.2e-194 681.8 719 54.8
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 4.6e-193 679.1 1028 44.9
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 2.3e-184 650.2 733 52.0
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 2.0e-180 637.1 912 45.7
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 1.4e-176 624.4 741 51.6
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 1.4e-168 597.8 709 50.8
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 2.8e-166 590.1 712 49.6
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 3.7e-166 589.7 579 58.5
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 1.8e-165 587.4 707 50.2
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 5.0e-163 579.3 1022 40.2
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 2.6e-151 540.4 776 42.1
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 1.6e-148 531.2 550 54.7
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 8.6e-147 525.4 654 48.5
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 3.6e-145 520.0 696 43.5
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 1.7e-142 511.1 1050 36.5
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 1.5e-130 471.5 708 42.2
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 8.1e-129 465.7 614 45.6
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 5.4e-125 453.0 557 46.0
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 4.2e-85 320.5 417 48.4
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.7e-65 255.4 217 59.4
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 3.7e-57 227.6 160 70.6
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 1.2e-52 212.6 347 34.0
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 4.0e-43 181.0 197 55.3
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 5.4e-40 170.6 316 32.6
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 9.2e-24 116.7 279 35.1
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 1.7e-22 112.5 114 51.8
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 5.6e-21 107.5 76 71.1
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-15 88.2 102 51.0
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 3.5e-15 88.2 82 57.3
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.2e-11 74.3 70 60.0
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-10 72.0 266 26.7
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 2.6e-10 72.0 41 85.4
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 6.4e-09 67.4 38 86.8


User provided reference genes

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