Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 2.2e-218 761.9 369 100.0
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 3.1e-183 645.2 371 83.6
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 1.1e-177 626.7 371 80.6
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 1.5e-177 626.3 371 82.2
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 4.3e-177 624.8 371 80.6
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 3.6e-176 621.7 372 80.1
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 5.2e-175 617.8 366 80.3
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 5.4e-172 607.8 368 77.2
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 6.0e-171 604.4 396 75.0
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 1.0e-170 603.6 369 77.0
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 1.0e-170 603.6 367 79.3
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 3.0e-170 602.1 369 77.2
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 1.9e-169 599.4 367 77.9
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 2.5e-169 599.0 367 77.9
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 3.3e-169 598.6 370 77.0
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 7.3e-169 597.4 367 77.7
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 9.5e-169 597.0 371 74.4
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.2e-168 596.7 370 76.8
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 4.0e-167 591.7 370 76.2
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 4.0e-167 591.7 369 77.5
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 6.8e-167 590.9 367 76.8
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 8.9e-167 590.5 369 75.6
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 4.9e-165 584.7 372 74.7
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 4.2e-164 581.6 369 77.0
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.6e-163 579.7 370 75.1
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 1.0e-162 577.0 371 73.3
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 2.3e-162 575.9 365 73.7
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 1.5e-161 573.2 367 74.4
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 2.1e-160 569.3 369 73.4
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 1.4e-159 566.6 341 79.2
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 2.4e-159 565.8 368 73.6
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 5.3e-159 564.7 371 72.2
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 9.0e-159 563.9 372 72.6
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 1.2e-158 563.5 368 72.6
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 2.0e-158 562.8 369 73.2
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 2.0e-158 562.8 343 76.4
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 1.3e-157 560.1 375 72.5
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 1.7e-157 559.7 369 72.4
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 1.7e-157 559.7 368 72.3
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 4.9e-157 558.1 369 71.8
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 4.2e-156 555.1 365 71.0
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 1.2e-155 553.5 362 73.8
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 3.5e-155 552.0 369 71.3
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 1.3e-154 550.1 373 71.3
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 2.3e-154 549.3 361 73.7
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 6.6e-154 547.7 367 72.8
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 3.3e-153 545.4 372 70.4
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 4.3e-153 545.0 368 69.6
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 7.3e-153 544.3 372 70.7
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 9.6e-153 543.9 373 70.2
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 6.2e-152 541.2 373 69.7
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 5.3e-151 538.1 368 70.4
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 5.3e-151 538.1 372 67.5
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 4.5e-150 535.0 377 68.4
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 2.2e-149 532.7 367 70.8
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 2.9e-149 532.3 408 65.7
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 5.4e-148 528.1 372 68.5
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 9.3e-148 527.3 366 68.6
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 3.5e-147 525.4 367 70.6
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 6.0e-147 524.6 367 68.7
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 1.0e-146 523.9 410 64.1
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 6.2e-144 514.6 371 67.7
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 1.4e-143 513.5 368 66.3
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 6.9e-143 511.1 351 70.4
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 6.9e-143 511.1 381 66.4
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 3.4e-142 508.8 398 64.8
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 1.9e-140 503.1 291 78.0
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 4.2e-140 501.9 368 64.9
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 7.1e-140 501.1 402 63.9
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 9.3e-140 500.7 370 67.8
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 1.0e-138 497.3 368 64.1
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 3.9e-138 495.4 367 64.6
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 8.7e-138 494.2 369 64.0
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 1.1e-137 493.8 367 64.3
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 3.3e-137 492.3 367 64.0
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 4.3e-137 491.9 367 64.0
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 5.6e-137 491.5 368 63.9
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 5.6e-137 491.5 376 64.4
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 7.4e-137 491.1 351 67.5
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 9.6e-137 490.7 290 79.3
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 1.3e-136 490.3 369 62.9
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 2.1e-136 489.6 367 63.2
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 2.8e-136 489.2 380 65.3
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 4.0e-135 485.3 369 66.4
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 6.9e-135 484.6 371 63.1
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 9.0e-135 484.2 374 64.2
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 2.0e-134 483.0 367 62.9
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 4.5e-134 481.9 366 63.1
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 8.7e-130 467.6 368 63.6
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 1.1e-129 467.2 368 60.3
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.4e-127 460.3 398 59.8
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 1.1e-124 450.7 365 65.2
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 5.3e-119 431.8 388 56.2
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 8.5e-117 424.5 313 65.2
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 2.2e-112 409.8 454 48.0
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 6.3e-112 408.3 355 60.0
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 7.0e-111 404.8 345 58.0
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 6.1e-107 391.7 365 53.2
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 3.5e-94 349.4 373 47.7
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 1.5e-89 334.0 216 70.4
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 3.2e-79 299.7 184 76.1
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 3.1e-66 256.5 271 49.1
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 2.2e-64 250.4 174 71.8
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 4.3e-52 209.5 158 63.3
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 4.7e-51 206.1 150 66.0
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 1.2e-46 191.4 127 74.8
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 2.1e-46 190.7 367 32.4
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 2.1e-35 154.1 139 55.4
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 7.1e-31 139.0 131 52.7
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 4.3e-28 129.8 431 26.7
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 4.8e-27 126.3 68 76.5
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 6.2e-27 125.9 69 75.4
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 6.0e-22 109.4 77 71.4
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 8.7e-21 105.5 117 47.0
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 1.8e-18 97.8 95 47.4
COL.COLO4_27080 Corchorus olitorius HOM05D006688 ORTHO05D008550 2.5e-12 77.4 68 64.7
BcaB08g35553 Brassica carinata HOM05D001335 ORTHO05D001184 1.3e-08 65.1 173 29.5
Medtr3g075400 Medicago truncatula HOM05D000464 ORTHO05D006292 1.3e-08 65.1 166 26.5
Eucgr.E02834 Eucalyptus grandis HOM05D001335 ORTHO05D001184 3.8e-08 63.5 184 27.2
FAN10G1082 Fragaria x ananassa HOM05D001335 ORTHO05D001184 3.8e-08 63.5 195 24.1
PGR142G1073 Punica granatum HOM05D000836 ORTHO05D000709 3.8e-08 63.5 203 24.6
BcaB07g31609 Brassica carinata HOM05D006688 ORTHO05D008550 8.5e-08 62.4 117 35.9
Thhalv10013321m.g Eutrema salsugineum HOM05D000464 ORTHO05D006292 1.4e-07 61.6 239 21.8
CBR_g11128 Chara braunii HOM05D005544 ORTHO05D007303 1.9e-07 61.2 132 27.3
Eucgr.E02826 Eucalyptus grandis HOM05D001335 ORTHO05D001184 1.9e-07 61.2 185 25.9
Eucgr.E02832 Eucalyptus grandis HOM05D001335 ORTHO05D001184 2.5e-07 60.8 184 27.2
EL10Ac9g21859 Beta vulgaris HOM05D003913 ORTHO05D004803 4.2e-07 60.1 154 27.3
Eucgr.E02835 Eucalyptus grandis HOM05D001335 ORTHO05D001184 5.5e-07 59.7 137 29.2
BcaC01g06150 Brassica carinata HOM05D001335 ORTHO05D001184 7.2e-07 59.3 104 31.7
C03p18740 Brassica napus HOM05D001335 ORTHO05D001184 7.2e-07 59.3 104 31.7
BolC3t14265H Brassica oleracea HOM05D001335 ORTHO05D001184 7.2e-07 59.3 104 31.7
Eucgr.E02828 Eucalyptus grandis HOM05D001335 ORTHO05D001184 7.2e-07 59.3 137 29.9
Cre10.g466250 Chlamydomonas reinhardtii HOM05D000002 ORTHO05D006339 9.4e-07 58.9 153 26.8
A03p15940 Brassica napus HOM05D001335 ORTHO05D001184 1.6e-06 58.2 104 29.8
BraA03t10884Z Brassica rapa HOM05D001335 ORTHO05D001184 1.6e-06 58.2 104 29.8
Eucgr.E02830 Eucalyptus grandis HOM05D001335 ORTHO05D001184 1.6e-06 58.2 184 27.2
Sabra15G0148800 Salix brachista HOM05D001335 ORTHO05D001184 1.6e-06 58.2 134 26.1
Sp1g35950 Schrenkiella parvula HOM05D003769 ORTHO05D004521 1.6e-06 58.2 154 26.6
CDE08G0852 Ceratophyllum demersum HOM05D000464 ORTHO05D006292 2.1e-06 57.8 156 26.9
CBR_g4366 Chara braunii HOM05D005323 ORTHO05D006820 2.1e-06 57.8 107 28.0
Oeu044595.1 Olea europaea HOM05D000453 ORTHO05D000387 2.1e-06 57.8 139 28.1
Thhalv10013582m.g Eutrema salsugineum HOM05D001335 ORTHO05D001184 2.7e-06 57.4 104 30.8
Ca_23759_v3 Cicer arietinum L. HOM05D001335 ORTHO05D001184 3.6e-06 57.0 222 24.8
Dinv40419 Davidia involucrata HOM05D003769 ORTHO05D004521 3.6e-06 57.0 124 24.2
FAN01G1359 Fragaria x ananassa HOM05D001335 ORTHO05D001184 3.6e-06 57.0 149 26.8
FAN03G1395 Fragaria x ananassa HOM05D001335 ORTHO05D001184 3.6e-06 57.0 149 26.8
FAN03G1833 Fragaria x ananassa HOM05D001335 ORTHO05D001184 3.6e-06 57.0 149 26.8
SEGI_38002 Sequoiadendron giganteum HOM05D005544 ORTHO05D007303 3.6e-06 57.0 116 29.3
Thecc.01G155400 Theobroma cacao HOM05D001335 ORTHO05D001184 3.6e-06 57.0 192 24.5
BcaC04g20614 Brassica carinata HOM05D001335 ORTHO05D001184 4.6e-06 56.6 106 31.1
C09p41490 Brassica napus HOM05D001335 ORTHO05D001184 4.6e-06 56.6 106 31.1
Duzib147G1526 Durio zibethinus HOM05D001335 ORTHO05D001184 4.6e-06 56.6 68 36.8
Glyma.09G148000 Glycine max HOM05D001335 ORTHO05D001184 4.6e-06 56.6 149 28.9
Glyma.16G199300 Glycine max HOM05D001335 ORTHO05D001184 4.6e-06 56.6 149 28.9
VMungo0464G0868 Vigna mungo HOM05D001335 ORTHO05D001184 4.6e-06 56.6 149 28.9
AT2G46290 Arabidopsis thaliana HOM05D001715 ORTHO05D003849 6.1e-06 56.2 67 37.3
EL10Ac1g00235 Beta vulgaris HOM05D000645 ORTHO05D000494 6.1e-06 56.2 192 26.0
BcaNung07194 Brassica carinata HOM05D003825 ORTHO05D004491 6.1e-06 56.2 225 24.9
Ciclev10018557m.g Citrus clementina HOM05D003769 ORTHO05D004521 6.1e-06 56.2 117 25.6
Pp3c26_9700 Physcomitrium patens HOM05D003769 ORTHO05D004521 6.1e-06 56.2 155 26.5
Hund20540 Selenicereus undatus HOM05D003261 ORTHO05D004230 6.1e-06 56.2 164 22.0
AL8G26310 Arabidopsis lyrata HOM05D001335 ORTHO05D001184 7.9e-06 55.8 106 32.1
AT5G51980 Arabidopsis thaliana HOM05D001335 ORTHO05D001184 7.9e-06 55.8 106 33.0
CBR_g13009 Chara braunii HOM05D006688 ORTHO05D008550 7.9e-06 55.8 51 49.0
Duzib211G0556 Durio zibethinus HOM05D005544 ORTHO05D007303 7.9e-06 55.8 306 21.9


User provided reference genes

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