Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41762 Davidia involucrata HOM05D005290 ORTHO05D006040 0.0e+00 1149.4 587 100.0
CSS0033470 Camellia sinensis var. sinensis HOM05D005290 ORTHO05D006040 9.2e-291 1003.0 588 87.1
CSS0003964 Camellia sinensis var. sinensis HOM05D005290 ORTHO05D006040 4.4e-285 984.2 588 85.9
Hma1.2p1_0004F.1_g003900 Hydrangea macrophylla HOM05D005290 ORTHO05D006040 2.8e-279 964.9 590 85.1
TAR381G0263 Trochodendron aralioides HOM05D005290 ORTHO05D006040 7.3e-272 940.3 588 81.3
vmacro00977 Vaccinium macrocarpon HOM05D005290 ORTHO05D006040 2.8e-271 938.3 589 82.7
Thecc.08G192800 Theobroma cacao HOM05D005290 ORTHO05D006040 6.2e-271 937.2 589 80.6
CiPaw.07G235300 Carya illinoinensis HOM05D005290 ORTHO05D006040 5.2e-270 934.1 589 80.1
Rhsim12G0006000 Rhododendron simsii HOM05D005290 ORTHO05D006040 1.7e-265 919.1 668 74.0
MSTRG.25478 Avicennia marina HOM05D005290 ORTHO05D006040 8.7e-265 916.8 588 79.8
Gohir.A13G118900 Gossypium hirsutum HOM05D005290 ORTHO05D006040 8.7e-265 916.8 588 79.4
Prupe.1G555900 Prunus persica HOM05D005290 ORTHO05D006040 7.3e-264 913.7 589 78.4
Potri.019G078700 Populus trichocarpa HOM05D005290 ORTHO05D006040 3.6e-263 911.4 590 79.7
Gorai.013G137700 Gossypium raimondii HOM05D005290 ORTHO05D006040 4.8e-263 911.0 589 78.9
Eucgr.F02988 Eucalyptus grandis HOM05D005290 ORTHO05D006040 9.0e-262 906.7 600 77.8
Manes.02G198901 Manihot esculenta HOM05D005290 ORTHO05D006040 9.0e-262 906.7 588 78.6
Migut.C01329 Erythranthe guttata HOM05D005290 ORTHO05D006040 4.4e-261 904.4 588 79.9
Cc10_g09470 Coffea canephora HOM05D005290 ORTHO05D006040 9.9e-261 903.3 588 78.9
Gohir.D13G122700 Gossypium hirsutum HOM05D005290 ORTHO05D006040 1.7e-260 902.5 611 76.4
AUR62004596 Chenopodium quinoa HOM05D005290 ORTHO05D006040 3.8e-260 901.4 589 77.9
RcHm_v2.0_Chr3g0494621 Rosa chinensis HOM05D005290 ORTHO05D006040 4.9e-260 901.0 588 77.9
Sc01g0002020 Simmondsia chinensis HOM05D005290 ORTHO05D006040 6.4e-260 900.6 589 78.1
Sabra19G0089500 Salix brachista HOM05D005290 ORTHO05D006040 8.4e-260 900.2 626 75.2
FvH4_5g31560 Fragaria vesca HOM05D005290 ORTHO05D006040 1.4e-259 899.4 588 78.1
CAN.G982.5 Capsicum annuum HOM05D005290 ORTHO05D006040 1.9e-259 899.0 590 78.8
Atru.chr13.2376 Acer truncatum HOM05D005290 ORTHO05D006040 9.3e-259 896.7 589 78.6
FAN04G2711 Fragaria x ananassa HOM05D005290 ORTHO05D006040 3.5e-258 894.8 588 78.2
RcHm_v2.0_Chr7g0226931 Rosa chinensis HOM05D005290 ORTHO05D006040 3.9e-257 891.3 588 77.2
Sopen04g017660 Solanum pennellii HOM05D005290 ORTHO05D006040 5.1e-257 891.0 588 77.9
Hund27128 Selenicereus undatus HOM05D005290 ORTHO05D006040 6.6e-257 890.6 595 77.1
Hund27133 Selenicereus undatus HOM05D005290 ORTHO05D006040 6.6e-257 890.6 595 77.1
Solyc04g045660.4 Solanum lycopersicum HOM05D005290 ORTHO05D006040 7.3e-256 887.1 589 77.4
Ciclev10019018m.g Citrus clementina HOM05D005290 ORTHO05D006040 2.1e-255 885.6 590 76.3
SGA_v2.0_scaffold118G32566 Striga asiatica HOM05D005290 ORTHO05D006040 2.8e-255 885.2 588 78.1
MBI03_g18676_MAGBIO Magnolia biondii HOM05D005290 ORTHO05D006040 1.4e-254 882.9 589 76.2
SalBow7G4073 Salvia bowleyana HOM05D005290 ORTHO05D006040 1.4e-254 882.9 588 77.0
CANSAT80G2649 Cannabis sativa HOM05D005290 ORTHO05D006040 1.8e-254 882.5 588 76.9
Nitab4.5_0008566g0030 Nicotiana tabacum HOM05D005290 ORTHO05D006040 1.3e-252 876.3 592 77.4
FAN18G4563 Fragaria x ananassa HOM05D005290 ORTHO05D006040 1.9e-251 872.5 586 76.6
COL.COLO4_24646 Corchorus olitorius HOM05D005290 ORTHO05D006040 3.2e-251 871.7 577 76.8
Glyma.04G254900 Glycine max HOM05D005290 ORTHO05D006040 2.7e-250 868.6 588 75.2
Nitab4.5_0006434g0010 Nicotiana tabacum HOM05D005290 ORTHO05D006040 6.0e-250 867.5 592 77.0
VMungo1080G0256 Vigna mungo HOM05D005290 ORTHO05D006040 6.0e-250 867.5 588 75.7
MD12G1033300 Malus domestica HOM05D005290 ORTHO05D006040 3.0e-249 865.1 589 76.4
Lj3g0002821 Lotus japonicus HOM05D005290 ORTHO05D006040 2.5e-248 862.1 590 74.4
AL6G42870 Arabidopsis lyrata HOM05D005290 ORTHO05D006040 5.6e-248 860.9 588 73.5
Phvul.005G002000 Phaseolus vulgaris HOM05D005290 ORTHO05D006040 1.6e-247 859.4 588 74.8
TPR.G25526 Trifolium pratense HOM05D005290 ORTHO05D006040 4.8e-247 857.8 588 73.5
Thhalv10028465m.g Eutrema salsugineum HOM05D005290 ORTHO05D006040 1.1e-246 856.7 590 73.2
Aa31LG9G14750 Aethionema arabicum HOM05D005290 ORTHO05D006040 4.0e-246 854.7 588 73.5
Sed0025467 Sechium edule HOM05D005290 ORTHO05D006040 4.0e-246 854.7 588 74.7
Carub.0006s2769 Capsella rubella HOM05D005290 ORTHO05D006040 2.2e-244 849.0 588 72.3
HanXRQChr09g0266431 Helianthus annuus HOM05D005290 ORTHO05D006040 2.2e-244 849.0 589 74.7
BcaB01g02803 Brassica carinata HOM05D005290 ORTHO05D006040 2.9e-244 848.6 588 72.1
Aqoxy6G00108 Aquilegia oxysepala HOM05D005290 ORTHO05D006040 7.1e-243 844.0 594 72.9
EL10Ac1g00141 Beta vulgaris HOM05D005290 ORTHO05D006040 7.1e-243 844.0 593 74.2
A03p28460 Brassica napus HOM05D005290 ORTHO05D006040 9.3e-243 843.6 588 71.6
BraA03t12051Z Brassica rapa HOM05D005290 ORTHO05D006040 9.3e-243 843.6 588 71.6
Lsat_1_v5_gn_1_31200 Lactuca sativa HOM05D005290 ORTHO05D006040 9.3e-243 843.6 590 75.3
Sp6g08400 Schrenkiella parvula HOM05D005290 ORTHO05D006040 1.6e-242 842.8 588 72.4
C03p34390 Brassica napus HOM05D005290 ORTHO05D006040 2.7e-242 842.0 588 71.8
BolC3t15749H Brassica oleracea HOM05D005290 ORTHO05D006040 2.7e-242 842.0 588 71.8
CsaV3_6G002720 Cucumis sativus L. HOM05D005290 ORTHO05D006040 3.5e-242 841.6 590 74.4
CARHR260140 Cardamine hirsuta HOM05D005290 ORTHO05D006040 7.9e-242 840.5 587 72.7
Lalb_Chr07g0189291 Lupinus albus HOM05D005290 ORTHO05D006040 3.9e-241 838.2 588 71.4
BcaC01g04730 Brassica carinata HOM05D005290 ORTHO05D006040 3.3e-240 835.1 588 71.4
MELO3C025009.2 Cucumis melo HOM05D005290 ORTHO05D006040 1.1e-238 830.1 590 73.2
ECA232G1421 Erigeron canadensis HOM05D005290 ORTHO05D006040 1.4e-238 829.7 585 75.0
Medtr3g005810 Medicago truncatula HOM05D005290 ORTHO05D006040 1.8e-238 829.3 590 71.0
arahy.Tifrunner.gnm1.ann1.0B02IH Arachis hypogaea HOM05D005290 ORTHO05D006040 1.5e-237 826.2 608 71.1
arahy.Tifrunner.gnm1.ann1.QF83TB Arachis hypogaea HOM05D005290 ORTHO05D006040 4.5e-237 824.7 603 71.5
PSO170G3966 Papaver somniferum HOM05D005290 ORTHO05D006040 1.7e-236 822.8 589 72.0
PSO782G1799 Papaver somniferum HOM05D005290 ORTHO05D006040 3.3e-232 808.5 589 71.3
AT4G09140 Arabidopsis thaliana HOM05D005290 ORTHO05D006040 2.8e-231 805.4 566 72.4
Ca_13983_v3 Cicer arietinum L. HOM05D005290 ORTHO05D006040 2.8e-231 805.4 580 71.6
TWI59G0173 Tripterygium wilfordii HOM05D005290 ORTHO05D006040 1.4e-225 786.6 602 70.3
ATR1136G152 Amborella trichopoda HOM05D005290 ORTHO05D006040 3.9e-225 785.0 597 68.5
Ah.05g178620 Amaranthus hybridus HOM05D005290 ORTHO05D006040 1.7e-223 779.6 571 70.9
AUR62023548 Chenopodium quinoa HOM05D005290 ORTHO05D006040 3.2e-219 765.4 587 69.3
SHI12388 Sapria himalayana HOM05D005290 ORTHO05D006040 7.2e-219 764.2 588 67.3
Psat1g008120 Pisum sativum HOM05D005290 ORTHO05D006040 1.2e-218 763.5 589 66.6
PGR042G0738 Punica granatum HOM05D005290 ORTHO05D006040 2.1e-218 762.7 606 67.8
Os01g0958900 Oryza sativa ssp. japonica HOM05D005290 ORTHO05D006040 1.8e-217 759.6 589 66.4
Cfa012974 Carpinus fangiana HOM05D005290 ORTHO05D006040 2.6e-216 755.7 470 81.9
Zm00001eb362590 Zea mays HOM05D005290 ORTHO05D006040 5.9e-213 744.6 588 64.8
unitig_26.g9865 Utricularia gibba HOM05D005290 ORTHO05D006040 2.8e-207 725.7 590 65.4
Peaxi162Scf00076g10023 Petunia axillaris HOM05D005290 ORTHO05D006040 2.6e-205 719.2 588 66.7
Lalb_Chr18g0049141 Lupinus albus HOM05D005290 ORTHO05D006040 6.5e-196 688.0 588 61.6
SEGI_07557 Sequoiadendron giganteum HOM05D005290 ORTHO05D006040 9.8e-192 674.1 580 59.3
ClCG08G002460 Citrullus lanatus HOM05D005290 ORTHO05D006040 2.7e-189 666.0 462 75.5
Mapoly0086s0067 Marchantia polymorpha HOM05D005290 ORTHO05D006040 9.5e-187 657.5 595 58.2
Pp3c10_9000 Physcomitrium patens HOM05D005290 ORTHO05D006040 5.2e-185 651.7 594 59.3
Lj7C285G2 Lonicera japonica HOM05D005290 ORTHO05D006040 8.9e-185 651.0 492 72.6
Nn1g08422 Nelumbo nucifera HOM05D005290 ORTHO05D006040 1.0e-180 637.5 448 73.4
AagrBONN_evm.TU.Sc2ySwM_344.4012 Anthoceros agrestis HOM05D005290 ORTHO05D006040 3.0e-180 636.0 597 56.4
CDE02G0285 Ceratophyllum demersum HOM05D005290 ORTHO05D006040 4.9e-159 565.5 490 61.8
Duzib177G0512 Durio zibethinus HOM05D005290 ORTHO05D006040 9.2e-158 561.2 349 80.5
CBR_g11107 Chara braunii HOM05D005290 ORTHO05D006040 4.3e-155 552.4 639 48.0
HPP92_004622 Vanilla planifolia HOM05D005290 ORTHO05D006040 8.7e-148 528.1 407 68.1
SMO340G0005 Selaginella moellendorffii HOM05D005290 ORTHO05D006040 5.6e-147 525.4 577 50.4
Cpa.g.sc50.56 Carica papaya HOM05D005290 ORTHO05D006040 4.6e-141 505.8 366 72.1
Sed0027029 Sechium edule HOM05D005290 ORTHO05D006040 3.0e-140 503.1 455 60.7
Oeu059199.1 Olea europaea HOM05D005290 ORTHO05D006040 1.2e-133 481.1 309 78.0
PRCOL_00005034 Prasinoderma coloniale HOM05D005290 ORTHO05D006040 2.8e-106 390.2 632 38.8
GSVIVG01026715001 Vitis vinifera HOM05D005290 ORTHO05D006040 1.4e-102 377.9 215 90.2
DCAR_017435 Daucus carota HOM05D005290 ORTHO05D006040 5.2e-100 369.4 286 69.9
Cpa.g.sc50.54 Carica papaya HOM05D005290 ORTHO05D006040 3.1e-97 360.1 215 84.2
Sed0005919 Sechium edule HOM05D005290 ORTHO05D006040 3.7e-90 336.7 233 70.4
CSS0016165 Camellia sinensis var. sinensis HOM05D005290 ORTHO05D006040 1.2e-88 331.6 323 61.9
MCO16G484 Micromonas commoda HOM05D005290 ORTHO05D006040 3.8e-87 326.6 593 34.7
Nn1g08386 Nelumbo nucifera HOM05D005290 ORTHO05D006040 1.6e-80 304.7 183 82.0
Haze_21326 Corylus avellana HOM05D005290 ORTHO05D006040 9.8e-75 285.4 172 77.3
DCAR_017434 Daucus carota HOM05D005290 ORTHO05D006040 1.7e-74 284.6 181 75.1
Cfa009487 Carpinus fangiana HOM05D005290 ORTHO05D006040 5.0e-71 273.1 614 32.7
HPP92_004621 Vanilla planifolia HOM05D005290 ORTHO05D006040 1.2e-67 261.9 186 66.7
Cre01.g036050 Chlamydomonas reinhardtii HOM05D005290 ORTHO05D006040 8.3e-66 255.8 843 28.2
Lsat_1_v5_gn_1_32860 Lactuca sativa HOM05D005290 ORTHO05D006040 3.3e-62 243.8 205 63.9
Dinv16440 Davidia involucrata HOM05D005290 ORTHO05D006040 6.2e-61 239.6 141 89.4
Rhsim03G0213900 Rhododendron simsii HOM05D005290 ORTHO05D006040 5.8e-59 233.0 132 87.9
CDE02G3660 Ceratophyllum demersum HOM05D005290 ORTHO05D006040 1.3e-58 231.9 236 56.8
PGSC0003DMG402015043 Solanum tuberosum HOM05D005290 ORTHO05D006040 9.5e-54 215.7 128 78.9
Lsat_1_v5_gn_8_103720 Lactuca sativa HOM05D005290 ORTHO05D006040 2.3e-52 211.1 348 42.2
RhsimUnG0011300 Rhododendron simsii HOM05D005290 ORTHO05D006040 1.2e-48 198.7 115 87.0
ClCG08G002450 Citrullus lanatus HOM05D005290 ORTHO05D006040 2.3e-47 194.5 147 64.6
ATR1136G132 Amborella trichopoda HOM05D005290 ORTHO05D006040 1.1e-46 192.2 132 70.5
Lsat_1_v5_gn_4_131700 Lactuca sativa HOM05D005290 ORTHO05D006040 7.6e-43 179.5 119 76.5
Lsat_1_v5_gn_2_95100 Lactuca sativa HOM05D005290 ORTHO05D006040 1.1e-36 159.1 167 58.7
Lsat_1_v5_gn_5_63620 Lactuca sativa HOM05D005422 ORTHO05D006040 1.1e-36 159.1 167 58.7
Oeu006599.1 Olea europaea HOM05D005290 ORTHO05D006040 3.9e-31 140.6 100 67.0
Lsat_1_v5_gn_2_103881 Lactuca sativa HOM05D005290 ORTHO05D006040 7.3e-30 136.3 95 75.8
Lsat_1_v5_gn_2_95080 Lactuca sativa HOM05D005290 ORTHO05D006040 1.1e-28 132.5 89 77.5
MD14G1034100 Malus domestica HOM05D005290 ORTHO05D006040 2.9e-26 124.4 236 38.1
Lj7A285T59 Lonicera japonica HOM05D005290 ORTHO05D006040 4.2e-25 120.6 63 88.9
Dinv08418 Davidia involucrata HOM05D005290 ORTHO05D006040 1.0e-23 115.9 69 82.6
PGSC0003DMG401015043 Solanum tuberosum HOM05D005290 ORTHO05D006040 3.0e-23 114.4 65 83.1
HanXRQChr07g0194581 Helianthus annuus HOM05D005290 ORTHO05D006040 2.1e-16 91.7 75 68.0
MBI18_g19490_MAGBIO Magnolia biondii HOM05D004276 ORTHO05D005126 2.3e-15 88.2 69 68.1
Glyma.19G059900 Glycine max HOM05D005290 ORTHO05D006040 1.1e-12 79.3 56 69.6
Oeu042240.1 Olea europaea HOM05D005290 ORTHO05D006040 1.4e-12 79.0 60 68.3
Actinidia24740 Actinidia chinensis HOM05D005290 ORTHO05D006040 1.9e-09 68.6 42 81.0
MD14G1034200 Malus domestica HOM05D005290 ORTHO05D006040 3.2e-09 67.8 40 85.0
Zm00001eb258080 Zea mays HOM05D000837 ORTHO05D444011 6.0e-08 63.5 104 42.3
Peaxi162Scf00001ggene001 Petunia axillaris HOM05D002199 ORTHO05D007829 1.1e-06 59.3 196 26.0
PRCOL_00003998 Prasinoderma coloniale HOM05D002199 ORTHO05D007829 1.5e-06 58.9 217 26.3
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.9e-06 58.5 273 23.4
Cfa027213 Carpinus fangiana HOM05D002199 ORTHO05D007829 2.5e-06 58.2 270 24.8
Nitab4.5_0001756g0160 Nicotiana tabacum HOM05D002199 ORTHO05D007829 5.7e-06 57.0 222 25.2
Nitab4.5_0002469g0020 Nicotiana tabacum HOM05D002199 ORTHO05D007829 5.7e-06 57.0 213 26.3
Lalb_Chr06g0163421 Lupinus albus HOM05D002199 ORTHO05D007829 9.7e-06 56.2 195 24.6


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