Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 0.0e+00 1875.1 951 100.0
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 0.0e+00 1357.8 894 80.0
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 0.0e+00 1269.6 952 71.5
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 0.0e+00 1208.4 950 68.9
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 0.0e+00 1164.1 954 65.6
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 0.0e+00 1144.8 949 65.5
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 0.0e+00 1134.0 953 65.2
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 0.0e+00 1130.2 992 63.5
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 0.0e+00 1093.2 952 63.6
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 0.0e+00 1092.4 952 63.7
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 0.0e+00 1087.4 956 62.8
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 0.0e+00 1076.2 954 62.6
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 0.0e+00 1075.1 956 61.6
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 6.5e-312 1073.5 952 62.9
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 1.7e-310 1069.3 952 62.7
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 1.1e-309 1066.6 958 63.4
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 1.0e-307 1060.1 953 63.2
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.6e-305 1051.6 953 62.9
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 6.2e-305 1050.8 953 62.9
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 2.4e-304 1048.9 960 62.0
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 4.0e-304 1048.1 948 61.8
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 4.0e-304 1048.1 948 62.1
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 1.2e-303 1046.6 953 62.0
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 3.4e-303 1045.0 867 67.0
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.9e-302 1042.0 952 62.3
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 4.9e-302 1041.2 955 62.2
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 8.4e-302 1040.4 951 62.1
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.9e-301 1039.3 953 61.8
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 7.1e-301 1037.3 947 62.0
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 2.7e-300 1035.4 946 61.8
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 1.3e-299 1033.1 946 61.4
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 4.6e-292 1008.1 979 60.3
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 4.6e-292 1008.1 962 58.9
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 3.0e-291 1005.4 960 59.7
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.1e-290 1003.4 953 59.7
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 1.5e-290 1003.0 954 59.4
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 2.8e-289 998.8 953 59.7
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 3.7e-289 998.4 940 60.2
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 2.6e-287 992.3 961 59.2
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 2.2e-286 989.2 960 59.5
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 1.1e-285 986.9 947 58.9
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 1.4e-285 986.5 951 59.4
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 1.4e-285 986.5 1027 56.8
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 7.2e-285 984.2 953 58.8
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 3.6e-284 981.9 955 59.2
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 1.8e-283 979.5 953 59.1
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 3.0e-283 978.8 955 58.8
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 6.7e-283 977.6 950 58.1
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.1e-282 976.9 955 58.2
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 4.3e-282 974.9 950 58.1
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 9.7e-282 973.8 799 67.8
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 4.8e-281 971.5 951 58.1
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 1.1e-280 970.3 948 58.9
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 1.4e-280 969.9 742 69.7
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 6.9e-280 967.6 755 70.7
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 2.0e-279 966.1 951 59.1
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 1.7e-278 963.0 958 57.8
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 2.3e-275 952.6 960 57.3
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 5.7e-274 948.0 954 57.3
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 1.3e-273 946.8 893 61.4
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 1.4e-269 933.3 950 57.1
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 5.5e-269 931.4 962 56.2
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 6.1e-268 927.9 717 69.0
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 6.1e-268 927.9 949 56.8
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 2.6e-266 922.5 975 56.6
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.2e-263 913.7 954 56.4
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 6.5e-262 907.9 949 55.4
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 8.5e-262 907.5 1007 53.7
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 5.5e-261 904.8 949 55.2
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 5.5e-261 904.8 951 55.8
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 9.4e-261 904.0 950 55.4
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.2e-260 903.7 899 58.5
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 8.0e-260 901.0 951 55.0
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.4e-259 900.2 953 55.2
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 1.4e-259 900.2 949 55.2
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 8.2e-257 891.0 920 55.7
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 3.1e-256 889.0 957 54.2
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 1.6e-255 886.7 957 54.1
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 2.9e-254 882.5 958 54.1
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 3.8e-254 882.1 958 54.1
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 3.8e-254 882.1 958 54.1
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 1.7e-249 866.7 727 65.3
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 3.7e-249 865.5 939 54.6
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 3.1e-248 862.4 974 53.5
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 5.4e-248 861.7 925 54.5
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 4.5e-247 858.6 1084 50.7
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 1.6e-244 850.1 950 52.7
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 2.7e-239 832.8 946 51.5
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 2.0e-234 816.6 605 71.2
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 8.3e-233 811.2 973 50.2
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 3.2e-232 809.3 977 50.8
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.2e-231 807.4 997 51.4
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 2.6e-226 789.6 775 59.1
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 4.7e-220 768.8 792 55.6
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 4.3e-213 745.7 1043 47.6
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 7.6e-210 734.9 715 59.0
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 1.4e-203 714.1 724 57.9
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 3.4e-202 709.5 1063 45.3
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 1.3e-201 707.6 782 54.9
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 1.2e-199 701.0 748 55.7
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 4.8e-188 662.5 689 55.2
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 1.8e-187 660.6 765 51.9
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 1.7e-185 654.1 650 56.6
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 1.3e-169 601.3 760 48.6
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 2.7e-159 567.0 727 45.4
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 2.1e-143 514.2 870 38.2
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 3.7e-132 476.9 712 42.7
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 1.2e-125 455.3 572 45.8
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 2.9e-100 370.9 425 53.4
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.6e-66 258.8 217 59.0
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 2.5e-64 251.5 214 62.1
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 3.3e-48 198.0 347 32.9
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 3.1e-46 191.4 197 58.9
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 8.8e-41 173.3 318 33.0
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 2.7e-26 125.2 297 34.0
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 5.2e-25 120.9 123 51.2
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 7.7e-21 107.1 87 64.4
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.3e-20 106.3 74 70.3
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 3.0e-17 95.1 130 44.6
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-12 78.6 270 28.5
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.0e-12 77.8 70 62.9
CSS0035540 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 5.5e-11 74.3 66 56.1
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 9.5e-11 73.6 41 90.2
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 4.0e-09 68.2 38 89.5


User provided reference genes

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