Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 5.7e-245 850.5 439 100.0
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 4.9e-212 741.1 439 87.2
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.0e-209 733.4 439 86.1
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 1.0e-201 706.8 439 83.1
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 1.2e-199 699.9 438 82.2
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 6.4e-196 687.6 438 80.4
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 1.1e-192 676.8 439 79.5
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 4.3e-192 674.9 436 80.3
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.1e-190 670.2 439 79.5
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 3.1e-190 668.7 439 78.4
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 8.9e-190 667.2 437 78.7
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.5e-189 666.4 439 79.0
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 3.4e-189 665.2 439 79.0
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 3.4e-189 665.2 436 79.8
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 4.4e-189 664.8 541 69.5
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 7.1e-187 657.5 439 78.4
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 7.1e-187 657.5 437 78.7
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 7.1e-187 657.5 437 78.5
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 7.1e-187 657.5 561 67.0
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 2.1e-186 656.0 438 78.1
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 6.0e-186 654.4 438 77.9
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 7.8e-186 654.1 439 77.7
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 1.3e-185 653.3 442 78.7
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 2.3e-185 652.5 439 77.4
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 4.7e-183 644.8 360 91.9
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 4.7e-183 644.8 439 77.0
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 4.7e-183 644.8 451 76.5
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 5.3e-182 641.3 437 76.9
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 3.4e-181 638.6 438 76.7
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 3.8e-180 635.2 440 76.8
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 2.4e-179 632.5 437 75.1
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.0e-177 627.1 438 76.0
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 2.3e-177 625.9 443 75.8
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 5.1e-177 624.8 445 76.0
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 1.5e-176 623.2 436 75.9
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 4.3e-176 621.7 445 75.3
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 9.6e-176 620.5 522 65.3
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.3e-175 620.2 446 74.0
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 2.1e-175 619.4 437 73.7
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.4e-174 616.7 437 74.4
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 5.3e-174 614.8 439 73.3
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 6.9e-174 614.4 441 75.3
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.2e-173 613.6 438 74.0
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 7.6e-173 610.9 438 74.4
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 2.4e-171 605.9 523 66.0
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 1.6e-170 603.2 438 71.5
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 3.5e-170 602.1 438 74.7
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 6.0e-170 601.3 442 73.5
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 4.0e-166 588.6 359 83.0
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 5.3e-166 588.2 450 70.2
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 1.5e-165 586.6 437 70.9
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 2.2e-164 582.8 432 71.3
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 8.4e-164 580.9 438 72.1
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 1.1e-163 580.5 426 73.2
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.0e-161 573.9 363 83.5
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 3.9e-161 572.0 361 81.4
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 8.2e-159 564.3 439 70.6
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 8.4e-156 554.3 439 68.1
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 9.3e-155 550.8 406 71.2
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 2.1e-154 549.7 438 71.0
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 3.5e-154 548.9 415 71.1
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 5.7e-152 541.6 457 68.3
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 4.8e-151 538.5 406 71.2
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 6.3e-151 538.1 459 66.4
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 1.1e-150 537.3 443 67.3
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 5.3e-150 535.0 444 66.9
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 4.5e-149 531.9 416 69.2
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 5.0e-148 528.5 415 69.6
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 1.6e-146 523.5 359 76.6
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 7.9e-146 521.2 424 67.0
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 9.7e-144 514.2 324 83.0
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 6.3e-143 511.5 420 66.9
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 1.8e-142 510.0 424 66.0
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 3.1e-142 509.2 425 66.1
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 9.1e-142 507.7 427 65.6
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 2.0e-141 506.5 358 74.9
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 3.4e-141 505.8 375 71.5
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 1.7e-140 503.4 360 73.9
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.4e-139 500.4 440 64.1
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 2.5e-139 499.6 363 72.2
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 5.5e-139 498.4 446 61.9
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 4.7e-138 495.4 361 74.2
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 6.1e-138 495.0 357 71.7
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 6.7e-137 491.5 447 63.8
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 2.0e-136 490.0 439 63.1
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 9.7e-136 487.6 360 73.1
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 4.1e-134 482.3 410 65.4
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 9.1e-134 481.1 361 72.3
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 5.0e-132 475.3 359 70.8
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 1.5e-131 473.8 406 64.3
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 3.2e-131 472.6 439 61.3
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 2.7e-130 469.5 357 73.9
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 8.0e-130 468.0 365 70.1
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.1e-126 457.6 437 57.7
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 5.0e-124 448.7 413 61.0
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 1.1e-123 447.6 439 56.0
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 1.8e-121 440.3 450 59.3
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 1.8e-118 430.3 396 59.6
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.5e-115 420.6 326 67.8
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.2e-112 411.0 326 67.2
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 2.8e-111 406.4 337 64.7
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.7e-103 380.6 438 53.4
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 5.4e-102 375.6 397 57.2
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 1.6e-98 364.0 439 49.7
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 1.3e-95 354.4 222 79.7
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 4.9e-95 352.4 400 50.0
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 2.4e-94 350.1 365 57.0
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 6.0e-93 345.5 302 65.9
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 8.6e-92 341.7 422 45.7
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 8.0e-90 335.1 309 57.0
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 6.6e-84 315.5 325 57.2
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 5.6e-67 259.2 230 66.5
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 9.6e-67 258.5 217 67.3
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 5.3e-49 199.5 330 43.3
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 3.4e-48 196.8 302 40.7
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 4.5e-48 196.4 325 39.7
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 5.5e-38 162.9 140 60.7
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 4.3e-35 153.3 79 97.5
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 1.8e-33 147.9 79 96.2
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 4.1e-33 146.7 79 92.4
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 5.9e-32 142.9 79 89.9
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 5.9e-32 142.9 79 89.9
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 1.0e-31 142.1 79 91.1
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 2.5e-30 137.5 79 87.3
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 5.5e-30 136.3 79 86.1
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 2.7e-29 134.0 79 84.8
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 3.6e-29 133.7 79 82.3
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 3.6e-29 133.7 79 83.5
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 1.8e-28 131.3 72 90.3
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 5.7e-27 126.3 79 79.7
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.7e-26 124.8 79 77.2
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.7e-23 114.8 96 65.6
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 3.6e-13 80.5 56 71.4
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 8.8e-12 75.9 45 80.0
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 7.5e-11 72.8 90 45.6
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 2.8e-10 70.9 74 47.3
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 1.3e-07 62.0 30 96.7


User provided reference genes

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