Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25444 Davidia involucrata HOM05D002228 ORTHO05D002347 4.1e-182 641.3 343 100.0
Hma1.2p1_1326F.1_g275820 Hydrangea macrophylla HOM05D002228 ORTHO05D002347 5.9e-88 328.6 381 56.4
CSS0032468 Camellia sinensis var. sinensis HOM05D002228 ORTHO05D002347 8.0e-85 318.2 387 50.4
Rhsim01G0117100 Rhododendron simsii HOM05D002228 ORTHO05D002347 6.1e-77 292.0 382 51.0
Dinv41174 Davidia involucrata HOM05D002228 ORTHO05D002347 1.4e-76 290.8 379 49.1
GSVIVG01010860001 Vitis vinifera HOM05D002228 ORTHO05D002347 9.7e-75 284.6 386 49.2
vmacro20815 Vaccinium macrocarpon HOM05D002228 ORTHO05D002347 4.0e-68 262.7 368 47.0
CiPaw.08G032600 Carya illinoinensis HOM05D002228 ORTHO05D002347 7.0e-65 251.9 378 45.2
Actinidia01276 Actinidia chinensis HOM05D002228 ORTHO05D002347 1.7e-63 247.3 380 46.6
Lj5A615T13 Lonicera japonica HOM05D002228 ORTHO05D002347 8.6e-63 245.0 347 47.6
Ciclev10007587m.g Citrus clementina HOM05D002228 ORTHO05D002347 3.3e-62 243.0 378 47.4
Cfa013452 Carpinus fangiana HOM05D002228 ORTHO05D002347 3.4e-59 233.0 377 43.2
FAN22G1886 Fragaria x ananassa HOM05D002228 ORTHO05D002347 3.4e-59 233.0 382 41.9
FAN07G2529 Fragaria x ananassa HOM05D002228 ORTHO05D002347 4.4e-59 232.6 382 41.6
Thecc.09G186000 Theobroma cacao HOM05D002228 ORTHO05D002347 5.7e-59 232.3 384 44.5
DCAR_020149 Daucus carota HOM05D002228 ORTHO05D002347 1.3e-58 231.1 397 43.6
FvH4_4g07290 Fragaria vesca HOM05D002228 ORTHO05D002347 4.9e-58 229.2 383 41.5
QL04p081495 Quercus lobata HOM05D002228 ORTHO05D002347 4.9e-58 229.2 380 44.5
Oeu018818.1 Olea europaea HOM05D002228 ORTHO05D002347 8.3e-58 228.4 368 44.6
Haze_22018 Corylus avellana HOM05D002228 ORTHO05D002347 1.1e-57 228.0 377 42.4
FAN12G0633 Fragaria x ananassa HOM05D002228 ORTHO05D002347 1.1e-57 228.0 383 41.5
MD16G1248700 Malus domestica HOM05D002228 ORTHO05D002347 1.4e-57 227.6 382 42.7
RcHm_v2.0_Chr4g0399601 Rosa chinensis HOM05D002228 ORTHO05D002347 1.8e-57 227.3 382 41.4
Atru.chr7.756 Acer truncatum HOM05D002228 ORTHO05D002347 2.4e-57 226.9 382 44.5
Atru.chr7.777 Acer truncatum HOM05D002228 ORTHO05D002347 2.4e-57 226.9 382 44.5
Potri.006G075500 Populus trichocarpa HOM05D002228 ORTHO05D002347 3.5e-56 223.0 373 42.6
FAN17G2190 Fragaria x ananassa HOM05D002228 ORTHO05D002347 5.9e-56 222.2 391 39.9
TAR625G1463 Trochodendron aralioides HOM05D002228 ORTHO05D002347 3.9e-55 219.5 430 38.6
Cc06_g20930 Coffea canephora HOM05D002228 ORTHO05D002347 8.6e-55 218.4 369 42.8
CiPaw.07G197000 Carya illinoinensis HOM05D002228 ORTHO05D002347 1.5e-54 217.6 380 43.2
MD13G1241800 Malus domestica HOM05D002228 ORTHO05D002347 1.4e-52 211.1 390 41.8
Potri.018G142400 Populus trichocarpa HOM05D002228 ORTHO05D002347 5.2e-52 209.1 376 41.0
COL.COLO4_07060 Corchorus olitorius HOM05D002228 ORTHO05D002347 1.5e-51 207.6 381 42.0
Gohir.A05G002300 Gossypium hirsutum HOM05D002228 ORTHO05D002347 3.4e-51 206.5 384 41.9
Gorai.009G002500 Gossypium raimondii HOM05D002228 ORTHO05D002347 4.4e-51 206.1 384 41.7
Gohir.D05G002900 Gossypium hirsutum HOM05D002228 ORTHO05D002347 9.8e-51 204.9 384 41.4
Manes.14G158300 Manihot esculenta HOM05D002228 ORTHO05D002347 9.8e-51 204.9 375 41.3
Nn8g40782 Nelumbo nucifera HOM05D002228 ORTHO05D002347 1.3e-50 204.5 398 41.5
Sabra18G0116300 Salix brachista HOM05D002228 ORTHO05D002347 1.7e-50 204.1 376 41.2
Peaxi162Scf01038g00149 Petunia axillaris HOM05D002228 ORTHO05D002347 1.4e-49 201.1 386 37.0
Sabra06G0056400 Salix brachista HOM05D002228 ORTHO05D002347 2.0e-48 197.2 364 41.8
VMungo1309G0834 Vigna mungo HOM05D002228 ORTHO05D002347 1.7e-47 194.1 374 40.4
CAN.G491.9 Capsicum annuum HOM05D002228 ORTHO05D002347 2.3e-47 193.7 382 39.5
Solyc07g008730.2 Solanum lycopersicum HOM05D002228 ORTHO05D002347 2.5e-46 190.3 381 37.0
CANSAT11G2326 Cannabis sativa HOM05D002228 ORTHO05D002347 4.3e-46 189.5 379 39.1
Sopen07g004650 Solanum pennellii HOM05D002228 ORTHO05D002347 5.6e-46 189.1 382 37.4
Lj4g0002272 Lotus japonicus HOM05D002228 ORTHO05D002347 1.6e-45 187.6 382 38.7
Ca_02107_v3 Cicer arietinum L. HOM05D002228 ORTHO05D002347 2.8e-45 186.8 376 38.0
Lj6g0002831 Lotus japonicus HOM05D002228 ORTHO05D002347 3.1e-44 183.3 377 38.5
Glyma.17G059400 Glycine max HOM05D002228 ORTHO05D002347 1.2e-43 181.4 376 36.7
Glyma.13G100500 Glycine max HOM05D002228 ORTHO05D002347 2.0e-43 180.6 384 36.7
Glyma.15G166200 Glycine max HOM05D002228 ORTHO05D002347 2.6e-43 180.3 374 39.0
Glyma.09G059700 Glycine max HOM05D002228 ORTHO05D002347 5.8e-43 179.1 374 38.0
Phvul.003G141400 Phaseolus vulgaris HOM05D002228 ORTHO05D002347 9.8e-43 178.3 375 36.8
VMungo1215G0644 Vigna mungo HOM05D002228 ORTHO05D002347 1.3e-42 177.9 381 37.0
HanXRQChr03g0065511 Helianthus annuus HOM05D002228 ORTHO05D002347 1.7e-42 177.6 400 35.8
Migut.J00799 Erythranthe guttata HOM05D002228 ORTHO05D002347 2.2e-42 177.2 370 37.3
TPR.G7568 Trifolium pratense HOM05D002228 ORTHO05D002347 2.9e-42 176.8 373 37.0
ECA240G0470 Erigeron canadensis HOM05D002228 ORTHO05D002347 1.1e-41 174.9 379 36.4
Lalb_Chr11g0074731 Lupinus albus HOM05D002228 ORTHO05D002347 5.4e-41 172.6 375 37.1
arahy.Tifrunner.gnm1.ann1.XG21R6 Arachis hypogaea HOM05D002228 ORTHO05D002347 1.2e-40 171.4 377 37.4
arahy.Tifrunner.gnm1.ann1.FTH9FU Arachis hypogaea HOM05D002228 ORTHO05D002347 1.7e-39 167.5 377 35.8
Actinidia02501 Actinidia chinensis HOM05D002228 ORTHO05D002347 3.9e-39 166.4 286 42.0
PGSC0003DMG400028740 Solanum tuberosum HOM05D002228 ORTHO05D002347 3.9e-39 166.4 360 36.7
ClCG06G013600 Citrullus lanatus HOM05D002228 ORTHO05D002347 5.1e-39 166.0 398 35.2
arahy.Tifrunner.gnm1.ann1.FZD5NS Arachis hypogaea HOM05D002228 ORTHO05D002347 1.5e-38 164.5 375 36.3
SGA_v2.0_scaffold112G31576 Striga asiatica HOM05D002228 ORTHO05D002347 4.3e-38 162.9 377 35.0
arahy.Tifrunner.gnm1.ann1.94M007 Arachis hypogaea HOM05D002228 ORTHO05D002347 7.3e-38 162.2 371 35.3
Nitab4.5_0010000g0010 Nicotiana tabacum HOM05D002228 ORTHO05D002347 6.2e-37 159.1 384 35.7
TWI34G1415 Tripterygium wilfordii HOM05D002228 ORTHO05D002347 8.1e-37 158.7 381 38.1
Psat1g144080 Pisum sativum HOM05D002228 ORTHO05D002347 4.0e-36 156.4 378 36.8
Sed0011029 Sechium edule HOM05D002228 ORTHO05D002347 1.5e-35 154.5 381 36.0
Lalb_Chr13g0300011 Lupinus albus HOM05D002228 ORTHO05D002347 2.0e-35 154.1 381 35.4
Lsat_1_v5_gn_7_56301 Lactuca sativa HOM05D002228 ORTHO05D002347 2.6e-35 153.7 287 40.8
THA.LOC104814652 Tarenaya hassleriana HOM05D002228 ORTHO05D002347 3.4e-35 153.3 268 39.9
EL10Ac3g05517 Beta vulgaris HOM05D002228 ORTHO05D002347 1.3e-34 151.4 386 35.8
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 2.2e-34 150.6 297 39.1
unitig_9.g29493 Utricularia gibba HOM05D002228 ORTHO05D002347 6.4e-34 149.1 390 33.8
unitig_8.g4049 Utricularia gibba HOM05D002228 ORTHO05D002347 8.3e-34 148.7 374 34.0
Sed0028125 Sechium edule HOM05D002228 ORTHO05D002347 1.1e-33 148.3 348 33.9
Sc07g0008910 Simmondsia chinensis HOM05D002228 ORTHO05D002347 1.4e-33 147.9 358 36.3
PGR142G2981 Punica granatum HOM05D002228 ORTHO05D002347 7.1e-33 145.6 388 34.3
PSO170G5665 Papaver somniferum HOM05D002228 ORTHO05D002347 2.1e-32 144.1 359 33.7
Medtr2g038000 Medicago truncatula HOM05D002228 ORTHO05D002347 2.7e-32 143.7 372 35.2
PSO063G3334 Papaver somniferum HOM05D002228 ORTHO05D002347 4.6e-32 142.9 359 33.4
Prupe.1G075500 Prunus persica HOM05D002228 ORTHO05D002347 7.8e-32 142.1 157 56.1
Aqoxy7G02805 Aquilegia oxysepala HOM05D002228 ORTHO05D002347 1.3e-31 141.4 386 33.4
CsaV3_1G031870 Cucumis sativus L. HOM05D002228 ORTHO05D002347 2.3e-31 140.6 389 34.2
Hund11981 Selenicereus undatus HOM05D002228 ORTHO05D002347 3.0e-31 140.2 293 36.2
ATR0626G154 Amborella trichopoda HOM05D002228 ORTHO05D002347 8.6e-31 138.7 271 38.4
Phvul.009G236200 Phaseolus vulgaris HOM05D002228 ORTHO05D002347 5.6e-30 136.0 245 40.0
CDE02G1020 Ceratophyllum demersum HOM05D002228 ORTHO05D002347 1.1e-28 131.7 342 33.9
Thhalv10024489m.g Eutrema salsugineum HOM05D002228 ORTHO05D002347 1.8e-28 131.0 294 39.5
Nitab4.5_0000617g0060 Nicotiana tabacum HOM05D002228 ORTHO05D002347 5.2e-28 129.4 336 36.0
Oeu014001.1 Olea europaea HOM05D002228 ORTHO05D002347 6.8e-28 129.0 247 41.3
Carub.0007s1070 Capsella rubella HOM05D002228 ORTHO05D002347 1.2e-27 128.3 298 34.9
Aa31LG2G20610 Aethionema arabicum HOM05D002228 ORTHO05D002347 3.8e-26 123.2 349 31.5
AL7G22300 Arabidopsis lyrata HOM05D002228 ORTHO05D002347 3.8e-26 123.2 385 31.9
AT4G29940 Arabidopsis thaliana HOM05D002228 ORTHO05D002347 3.8e-26 123.2 273 35.9
MELO3C017429.2 Cucumis melo HOM05D002228 ORTHO05D002347 4.9e-26 122.9 398 30.7
SHI02862 Sapria himalayana HOM05D002228 ORTHO05D002347 1.2e-24 118.2 355 33.2
Ah.13g071300 Amaranthus hybridus HOM05D002228 ORTHO05D002347 1.6e-24 117.9 376 31.1
A01p08160 Brassica napus HOM05D002228 ORTHO05D002347 2.1e-24 117.5 294 36.7
AUR62016216 Chenopodium quinoa HOM05D002228 ORTHO05D002347 1.0e-23 115.2 384 31.5
BcaC01g01205 Brassica carinata HOM05D002228 ORTHO05D002347 1.3e-23 114.8 297 34.3
A08p19490 Brassica napus HOM05D002228 ORTHO05D002347 1.3e-23 114.8 305 34.8
BolC3t21210H Brassica oleracea HOM05D002228 ORTHO05D002347 1.3e-23 114.8 297 34.3
BraA08t33910Z Brassica rapa HOM05D002228 ORTHO05D002347 2.3e-23 114.0 309 35.0
AUR62039272 Chenopodium quinoa HOM05D002228 ORTHO05D002347 2.3e-23 114.0 357 30.8
BcaC09g51766 Brassica carinata HOM05D002228 ORTHO05D002347 5.1e-23 112.8 292 36.3
C01p09130 Brassica napus HOM05D002228 ORTHO05D002347 5.1e-23 112.8 292 36.3
BolC1t00904H Brassica oleracea HOM05D002228 ORTHO05D002347 5.1e-23 112.8 292 36.3
CARHR237860 Cardamine hirsuta HOM05D002228 ORTHO05D002347 6.6e-23 112.5 298 33.9
C03p88990 Brassica napus HOM05D002228 ORTHO05D002347 8.7e-23 112.1 297 34.0
HPP92_010285 Vanilla planifolia HOM05D002228 ORTHO05D002347 1.5e-22 111.3 247 36.0
BraA01t00764Z Brassica rapa HOM05D002228 ORTHO05D002347 1.9e-22 110.9 295 35.9
HPP92_010400 Vanilla planifolia HOM05D002228 ORTHO05D002347 3.4e-19 100.1 199 35.2
Sp7g27750 Schrenkiella parvula HOM05D002228 ORTHO05D002347 1.1e-17 95.1 298 34.9
Eucgr.C00114 Eucalyptus grandis HOM05D002228 ORTHO05D002347 1.4e-17 94.7 170 41.8
TPR.G508 Trifolium pratense HOM05D002228 ORTHO05D002347 1.3e-15 88.2 56 71.4
Os02g0147800 Oryza sativa ssp. japonica HOM05D002228 ORTHO05D002347 3.0e-15 87.0 346 28.6
Zm00001eb232240 Zea mays HOM05D002228 ORTHO05D002347 3.0e-15 87.0 274 29.2
SEGI_38946 Sequoiadendron giganteum HOM05D002228 ORTHO05D002347 3.4e-11 73.6 147 37.4
Pp3c3_29290 Physcomitrium patens HOM05D002228 ORTHO05D002347 3.2e-09 67.0 323 26.3
SEGI_06647 Sequoiadendron giganteum HOM05D002228 ORTHO05D002347 7.1e-09 65.9 56 50.0
Mapoly0080s0093 Marchantia polymorpha HOM05D002228 ORTHO05D002347 2.5e-06 57.4 170 29.4


User provided reference genes

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