Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24425 Davidia involucrata HOM05D005935 ORTHO05D007012 1.4e-92 343.2 205 100.0
TAR362G1094 Trochodendron aralioides HOM05D005935 ORTHO05D007012 2.3e-79 299.3 206 89.3
SGA_v2.0_scaffold81G26126 Striga asiatica HOM05D005935 ORTHO05D007012 3.0e-79 298.9 205 89.3
MD04G1195100 Malus domestica HOM05D005935 ORTHO05D007012 3.9e-79 298.5 201 89.6
Aqoxy2G00839 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 1.1e-78 297.0 205 87.8
GSVIVG01031220001 Vitis vinifera HOM05D005935 ORTHO05D007012 1.5e-78 296.6 205 87.3
Cc02_g34830 Coffea canephora HOM05D005935 ORTHO05D007012 4.3e-78 295.0 205 85.4
TAR636G0846 Trochodendron aralioides HOM05D005935 ORTHO05D007012 5.6e-78 294.7 204 88.7
Eucgr.H03282 Eucalyptus grandis HOM05D005935 ORTHO05D007012 1.3e-77 293.5 205 86.3
MSTRG.27950 Avicennia marina HOM05D005935 ORTHO05D007012 1.6e-77 293.1 205 88.3
Migut.N01391 Erythranthe guttata HOM05D005935 ORTHO05D007012 2.1e-77 292.7 206 87.4
Ah.06g188880 Amaranthus hybridus HOM05D005935 ORTHO05D007012 2.8e-77 292.4 205 85.9
Prupe.6G314900 Prunus persica HOM05D005935 ORTHO05D007012 2.8e-77 292.4 205 87.8
Lsat_1_v5_gn_5_102820 Lactuca sativa HOM05D005935 ORTHO05D007012 1.1e-76 290.4 205 84.9
SGA_v2.0_scaffold80G25879 Striga asiatica HOM05D005935 ORTHO05D007012 1.4e-76 290.0 205 86.8
MD12G1207200 Malus domestica HOM05D005935 ORTHO05D007012 1.8e-76 289.7 200 88.0
SalBow3G1520 Salvia bowleyana HOM05D005935 ORTHO05D007012 1.8e-76 289.7 205 86.3
Manes.09G175700 Manihot esculenta HOM05D005935 ORTHO05D007012 6.9e-76 287.7 202 88.6
Aqoxy4G02482 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 9.0e-76 287.3 205 85.4
ClCG02G015080 Citrullus lanatus HOM05D005935 ORTHO05D007012 2.0e-75 286.2 205 85.9
MELO3C004198.2 Cucumis melo HOM05D005935 ORTHO05D007012 2.0e-75 286.2 205 85.9
Hma1.2p1_0008F-1.1_g005750 Hydrangea macrophylla HOM05D005935 ORTHO05D007012 2.0e-75 286.2 205 86.8
Sed0001365 Sechium edule HOM05D005935 ORTHO05D007012 2.6e-75 285.8 205 84.4
EL10Ac4g09829 Beta vulgaris HOM05D005935 ORTHO05D007012 3.4e-75 285.4 206 85.9
CiPaw.07G028100 Carya illinoinensis HOM05D005935 ORTHO05D007012 5.8e-75 284.6 205 84.4
CsaV3_2G006940 Cucumis sativus L. HOM05D005935 ORTHO05D007012 9.9e-75 283.9 205 84.9
PGR031G1309 Punica granatum HOM05D005935 ORTHO05D007012 2.9e-74 282.3 200 85.0
RcHm_v2.0_Chr3g0456881 Rosa chinensis HOM05D005935 ORTHO05D007012 3.8e-74 282.0 201 85.6
vmacro01555 Vaccinium macrocarpon HOM05D005935 ORTHO05D007012 4.9e-74 281.6 248 73.4
Haze_04079 Corylus avellana HOM05D005935 ORTHO05D007012 6.4e-74 281.2 197 86.8
Os03g0831900 Oryza sativa ssp. japonica HOM05D005935 ORTHO05D007012 2.4e-73 279.3 203 83.3
unitig_21.g20172 Utricularia gibba HOM05D005935 ORTHO05D007012 3.2e-73 278.9 206 84.0
Peaxi162Scf00673g00126 Petunia axillaris HOM05D005935 ORTHO05D007012 5.5e-73 278.1 197 86.3
Solyc01g100330.3 Solanum lycopersicum HOM05D005935 ORTHO05D007012 9.3e-73 277.3 205 82.0
Sopen01g043840 Solanum pennellii HOM05D005935 ORTHO05D007012 9.3e-73 277.3 205 82.0
Phvul.001G225500 Phaseolus vulgaris HOM05D005935 ORTHO05D007012 1.2e-72 276.9 205 83.4
CAN.G1715.16 Capsicum annuum HOM05D005935 ORTHO05D007012 2.1e-72 276.2 205 82.9
Glyma.19G228900 Glycine max HOM05D005935 ORTHO05D007012 2.1e-72 276.2 204 83.3
Gohir.D08G223300 Gossypium hirsutum HOM05D005935 ORTHO05D007012 2.1e-72 276.2 201 85.1
Gorai.004G237200 Gossypium raimondii HOM05D005935 ORTHO05D007012 2.1e-72 276.2 201 85.1
PGSC0003DMG400002806 Solanum tuberosum HOM05D005935 ORTHO05D007012 2.1e-72 276.2 205 81.5
FvH4_6g07240 Fragaria vesca HOM05D005935 ORTHO05D007012 6.0e-72 274.6 198 85.9
Lj1g0021681 Lotus japonicus HOM05D005935 ORTHO05D007012 6.0e-72 274.6 200 83.5
Gohir.A08G206600 Gossypium hirsutum HOM05D005935 ORTHO05D007012 7.9e-72 274.2 201 84.6
HanXRQChr10g0299201 Helianthus annuus HOM05D005935 ORTHO05D007012 7.9e-72 274.2 205 82.9
Atru.chr2.148 Acer truncatum HOM05D005935 ORTHO05D007012 1.0e-71 273.9 204 85.8
COL.COLO4_04140 Corchorus olitorius HOM05D005935 ORTHO05D007012 1.0e-71 273.9 201 83.6
arahy.Tifrunner.gnm1.ann1.7UDZ1N Arachis hypogaea HOM05D005935 ORTHO05D007012 1.3e-71 273.5 205 80.0
Zm00001eb121760 Zea mays HOM05D005935 ORTHO05D007012 1.3e-71 273.5 202 79.2
arahy.Tifrunner.gnm1.ann1.I9BDFC Arachis hypogaea HOM05D005935 ORTHO05D007012 1.8e-71 273.1 205 81.5
Ca_09298_v3 Cicer arietinum L. HOM05D005935 ORTHO05D007012 1.8e-71 273.1 204 81.9
arahy.Tifrunner.gnm1.ann1.G5WI6L Arachis hypogaea HOM05D005935 ORTHO05D007012 3.0e-71 272.3 205 82.0
arahy.Tifrunner.gnm1.ann1.H1X696 Arachis hypogaea HOM05D005935 ORTHO05D007012 3.0e-71 272.3 205 82.0
Cpa.g.sc48.144 Carica papaya HOM05D005935 ORTHO05D007012 6.7e-71 271.2 201 84.6
Lalb_Chr18g0046051 Lupinus albus HOM05D005935 ORTHO05D007012 8.7e-71 270.8 205 81.0
CDE11G0767 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 1.5e-70 270.0 206 84.5
Actinidia16851 Actinidia chinensis HOM05D005935 ORTHO05D007012 1.9e-70 269.6 196 86.7
CDE05G0147 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 3.3e-70 268.9 206 84.5
Thecc.05G321000 Theobroma cacao HOM05D005935 ORTHO05D007012 3.3e-70 268.9 201 83.1
VMungo1383G1193 Vigna mungo HOM05D005935 ORTHO05D007012 3.3e-70 268.9 201 82.6
FAN05G5324 Fragaria x ananassa HOM05D005935 ORTHO05D007012 4.3e-70 268.5 206 82.0
Glyma.03G231900 Glycine max HOM05D005935 ORTHO05D007012 4.3e-70 268.5 204 81.4
FAN14G3557 Fragaria x ananassa HOM05D005935 ORTHO05D007012 5.6e-70 268.1 206 82.0
TWI36G1229 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 5.6e-70 268.1 202 84.2
SEGI_34613 Sequoiadendron giganteum HOM05D005935 ORTHO05D007012 7.4e-70 267.7 206 77.2
FAN02G1619 Fragaria x ananassa HOM05D005935 ORTHO05D007012 1.3e-69 266.9 206 81.6
Nn3g21642 Nelumbo nucifera HOM05D005935 ORTHO05D007012 1.3e-69 266.9 200 82.5
Lalb_Chr04g0260471 Lupinus albus HOM05D005935 ORTHO05D007012 2.8e-69 265.8 205 73.2
Sc09g0002670 Simmondsia chinensis HOM05D005935 ORTHO05D007012 2.8e-69 265.8 205 82.0
TWI56G1463 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 2.8e-69 265.8 202 84.7
Medtr7g112060 Medicago truncatula HOM05D005935 ORTHO05D007012 4.8e-69 265.0 200 81.0
Nitab4.5_0013342g0020 Nicotiana tabacum HOM05D000001 ORTHO05D004269 4.8e-69 265.0 207 80.2
ATR0767G209 Amborella trichopoda HOM05D005935 ORTHO05D007012 1.4e-68 263.5 205 80.0
ECA234G4853 Erigeron canadensis HOM05D005935 ORTHO05D007012 1.4e-68 263.5 203 78.3
Nitab4.5_0000155g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 1.8e-68 263.1 205 79.5
CANSAT54G1507 Cannabis sativa HOM05D005935 ORTHO05D007012 3.1e-68 262.3 207 81.6
QL01p019294 Quercus lobata HOM05D005935 ORTHO05D007012 2.6e-67 259.2 200 82.5
THA.LOC104802776 Tarenaya hassleriana HOM05D005935 ORTHO05D007012 2.6e-67 259.2 200 79.5
QL03p018299 Quercus lobata HOM05D005935 ORTHO05D007012 3.4e-67 258.8 204 78.9
BraA05t22944Z Brassica rapa HOM05D002110 ORTHO05D007012 4.5e-67 258.5 200 78.0
Psat3g013040 Pisum sativum HOM05D005935 ORTHO05D007012 7.6e-67 257.7 199 78.9
BolC5t34806H Brassica oleracea HOM05D002110 ORTHO05D007012 1.0e-66 257.3 199 76.4
Potri.013G010300 Populus trichocarpa HOM05D005935 ORTHO05D007012 1.3e-66 256.9 201 82.6
BcaC05g30089 Brassica carinata HOM05D005935 ORTHO05D007012 1.7e-66 256.5 200 76.5
PSO170G3047 Papaver somniferum HOM05D005935 ORTHO05D007012 1.7e-66 256.5 201 82.1
PSO357G0321 Papaver somniferum HOM05D005935 ORTHO05D007012 1.7e-66 256.5 201 82.1
Ciclev10002528m.g Citrus clementina HOM05D005935 ORTHO05D007012 2.2e-66 256.1 201 82.6
CARHR080230 Cardamine hirsuta HOM05D005935 ORTHO05D007012 6.5e-66 254.6 201 80.6
AUR62000683 Chenopodium quinoa HOM05D005935 ORTHO05D007012 8.4e-66 254.2 205 77.1
C05p61480 Brassica napus HOM05D002110 ORTHO05D007012 1.1e-65 253.8 201 79.6
Carub.0003s0513 Capsella rubella HOM05D005935 ORTHO05D007012 1.2e-64 250.4 200 76.0
AT3G05760 Arabidopsis thaliana HOM05D005935 ORTHO05D007012 2.7e-64 249.2 200 76.5
Sp3g04650 Schrenkiella parvula HOM05D005935 ORTHO05D007012 3.5e-64 248.8 200 76.0
CSS0047945 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 6.0e-64 248.1 167 91.0
AL3G16500 Arabidopsis lyrata HOM05D005935 ORTHO05D007012 2.3e-63 246.1 200 75.0
PSO478G5244 Papaver somniferum HOM05D005935 ORTHO05D007012 2.3e-63 246.1 205 78.0
Pp3c4_20180 Physcomitrium patens HOM05D005935 ORTHO05D007012 5.1e-63 245.0 202 75.7
TPR.G1633 Trifolium pratense HOM05D005935 ORTHO05D007012 6.7e-63 244.6 200 74.5
BcaC05g29782 Brassica carinata HOM05D005935 ORTHO05D007012 1.1e-62 243.8 200 74.0
Mapoly0111s0002 Marchantia polymorpha HOM05D005935 ORTHO05D007012 1.9e-62 243.0 197 75.1
Duzib128G1094 Durio zibethinus HOM05D005935 ORTHO05D007012 4.3e-62 241.9 153 81.0
DCAR_005416 Daucus carota HOM05D005935 ORTHO05D007012 5.7e-62 241.5 171 88.3
HPP92_015241 Vanilla planifolia HOM05D005935 ORTHO05D007012 4.8e-61 238.4 196 80.1
FAN09G4449 Fragaria x ananassa HOM05D005935 ORTHO05D007012 6.3e-61 238.0 148 83.8
CSS0009551 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 3.1e-60 235.7 197 78.2
Thhalv10022198m.g Eutrema salsugineum HOM05D005935 ORTHO05D007012 3.8e-58 228.8 275 57.5
Aa31LG5G16170 Aethionema arabicum HOM05D005935 ORTHO05D007012 1.4e-57 226.9 210 61.0
AUR62005273 Chenopodium quinoa HOM05D005935 ORTHO05D007012 9.3e-57 224.2 198 73.2
Hund07136 Selenicereus undatus HOM05D005935 ORTHO05D007012 2.5e-54 216.1 298 55.0
AagrBONN_evm.TU.Sc2ySwM_344.1201 Anthoceros agrestis HOM05D005935 ORTHO05D007012 3.3e-54 215.7 150 70.7
Nitab4.5_0000368g0260 Nicotiana tabacum HOM05D005935 ORTHO05D007012 2.8e-53 212.6 204 65.2
Rhsim11G0094200 Rhododendron simsii HOM05D005935 ORTHO05D007012 3.7e-53 212.2 215 58.1
Hund21747 Selenicereus undatus HOM05D005935 ORTHO05D007012 8.2e-53 211.1 205 69.8
AagrBONN_evm.TU.Sc2ySwM_228.1845 Anthoceros agrestis HOM05D005935 ORTHO05D007012 1.5e-51 206.8 146 69.2
SMO201G0167 Selaginella moellendorffii HOM05D005935 ORTHO05D007012 3.4e-51 205.7 205 64.4
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 2.9e-50 202.6 133 75.2
Lj5A336T44 Lonicera japonica HOM05D005935 ORTHO05D007012 1.6e-48 196.8 107 89.7
Oeu013219.2 Olea europaea HOM05D005935 ORTHO05D007012 7.9e-48 194.5 229 64.2
Pp3c12_7700 Physcomitrium patens HOM05D005935 ORTHO05D007012 6.3e-45 184.9 161 74.5
CSS0024691 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 1.8e-44 183.3 149 70.5
RcHm_v2.0_Chr7g0179971 Rosa chinensis HOM05D005935 ORTHO05D007012 5.5e-41 171.8 144 63.9
CSS0034550 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 3.6e-40 169.1 213 64.3
Nitab4.5_0007747g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 7.9e-40 167.9 123 88.6
CSS0031844 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 1.3e-37 160.6 127 70.1
Actinidia35528 Actinidia chinensis HOM05D005935 ORTHO05D007012 9.1e-36 154.5 286 49.7
Sabra13G0008800 Salix brachista HOM05D005935 ORTHO05D007012 1.0e-34 151.0 223 45.3
CBR_g38440 Chara braunii HOM05D005935 ORTHO05D007012 8.0e-32 141.4 198 45.5
Cre07.g341650 Chlamydomonas reinhardtii HOM05D005935 ORTHO05D007012 8.8e-31 137.9 228 49.6
FAN04G2955 Fragaria x ananassa HOM05D005935 ORTHO05D007012 4.7e-24 115.5 156 46.8
MCO03G264 Micromonas commoda HOM05D005935 ORTHO05D007012 4.7e-24 115.5 214 44.9
Zm00001eb307900 Zea mays HOM05D005935 ORTHO05D007012 3.5e-19 99.4 96 78.1
PRCOL_00000245 Prasinoderma coloniale HOM05D005935 ORTHO05D007012 5.0e-18 95.5 215 38.1
Zm00001eb114570 Zea mays HOM05D005935 ORTHO05D007012 2.5e-17 93.2 91 79.1
Zm00001eb180860 Zea mays HOM05D005935 ORTHO05D007012 3.5e-11 72.8 46 80.4
Cfa024511 Carpinus fangiana HOM05D005935 ORTHO05D007012 1.9e-09 67.0 160 29.4


User provided reference genes

Program Settings