Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20943 Davidia involucrata HOM05D002159 ORTHO05D045108 6.4e-111 404.1 200 100.0
Dinv21001 Davidia involucrata HOM05D002159 ORTHO05D045108 6.4e-111 404.1 200 100.0
Duzib084G0847 Durio zibethinus HOM05D002159 ORTHO05D005625 7.5e-35 151.4 107 73.8
TAR629G0581 Trochodendron aralioides HOM05D002159 ORTHO05D005625 2.7e-32 142.9 188 47.9
Hma1.2p1_1604F.1_g293320 Hydrangea macrophylla HOM05D002159 ORTHO05D005625 6.0e-32 141.7 188 47.9
GSVIVG01028919001 Vitis vinifera HOM05D002159 ORTHO05D005625 2.3e-31 139.8 188 47.9
Dinv28421 Davidia involucrata HOM05D002159 ORTHO05D005625 3.9e-31 139.0 188 47.3
vmacro06665 Vaccinium macrocarpon HOM05D002159 ORTHO05D005625 5.0e-31 138.7 188 46.8
Actinidia25881 Actinidia chinensis HOM05D002159 ORTHO05D005625 8.6e-31 137.9 188 47.3
Lj8C239G4 Lonicera japonica HOM05D002159 ORTHO05D005625 8.6e-31 137.9 188 46.3
CSS0008751 Camellia sinensis var. sinensis HOM05D002159 ORTHO05D005625 1.1e-30 137.5 192 46.9
CSS0044503 Camellia sinensis var. sinensis HOM05D002159 ORTHO05D005625 1.1e-30 137.5 192 46.9
Rhsim03G0187300 Rhododendron simsii HOM05D002159 ORTHO05D005625 3.3e-30 136.0 188 46.3
Nn1g01521 Nelumbo nucifera HOM05D002159 ORTHO05D005625 4.3e-30 135.6 188 46.3
Lsat_1_v5_gn_2_132660 Lactuca sativa HOM05D002159 ORTHO05D005625 1.6e-29 133.7 188 45.2
HanXRQChr14g0462121 Helianthus annuus HOM05D002159 ORTHO05D005625 3.6e-29 132.5 188 45.7
HPP92_025733 Vanilla planifolia HOM05D002159 ORTHO05D005625 3.6e-29 132.5 192 44.8
Hund04761 Selenicereus undatus HOM05D002159 ORTHO05D005625 6.2e-29 131.7 188 44.7
AUR62015961 Chenopodium quinoa HOM05D002159 ORTHO05D005625 1.4e-28 130.6 186 44.6
AUR62021167 Chenopodium quinoa HOM05D002159 ORTHO05D005625 3.1e-28 129.4 188 44.1
ECA238G4262 Erigeron canadensis HOM05D002159 ORTHO05D005625 3.1e-28 129.4 85 76.5
SalBow2G1087 Salvia bowleyana HOM05D002159 ORTHO05D005625 3.1e-28 129.4 91 71.4
HPP92_025730 Vanilla planifolia HOM05D002159 ORTHO05D005625 3.1e-28 129.4 192 44.3
EL10Ac3g05612 Beta vulgaris HOM05D002159 ORTHO05D005625 4.0e-28 129.0 188 44.1
Sc13g0008820 Simmondsia chinensis HOM05D002159 ORTHO05D005625 6.8e-28 128.3 192 42.7
HPP92_025761 Vanilla planifolia HOM05D002159 ORTHO05D005625 6.8e-28 128.3 96 69.8
Atru.chr1.430 Acer truncatum HOM05D002159 ORTHO05D005625 1.3e-26 124.0 187 43.3
arahy.Tifrunner.gnm1.ann1.JGS186 Arachis hypogaea HOM05D002159 ORTHO05D005625 2.2e-26 123.2 188 42.0
Migut.F01111 Erythranthe guttata HOM05D002159 ORTHO05D005625 2.2e-26 123.2 85 71.8
CANSAT21G0489 Cannabis sativa HOM05D002159 ORTHO05D005625 2.9e-26 122.9 188 43.1
Cpa.g.c26789.4 Carica papaya HOM05D002159 ORTHO05D005625 8.3e-26 121.3 188 42.6
Aqoxy7G00327 Aquilegia oxysepala HOM05D002159 ORTHO05D005625 1.1e-25 120.9 99 67.7
Medtr1g050492 Medicago truncatula HOM05D002159 ORTHO05D005625 1.1e-25 120.9 188 41.5
Phvul.004G114000 Phaseolus vulgaris HOM05D002159 ORTHO05D005625 1.1e-25 120.9 192 41.1
Prupe.2G296200 Prunus persica HOM05D002159 ORTHO05D005625 1.1e-25 120.9 188 42.0
CDE06G0059 Ceratophyllum demersum HOM05D002159 ORTHO05D005625 2.4e-25 119.8 188 42.6
Ciclev10004414m.g Citrus clementina HOM05D002159 ORTHO05D005625 2.4e-25 119.8 187 41.7
Manes.01G126800 Manihot esculenta HOM05D002159 ORTHO05D005625 2.4e-25 119.8 106 62.3
Ca_14555_v3 Cicer arietinum L. HOM05D002159 ORTHO05D005625 3.2e-25 119.4 192 41.1
Psat0s1874g0200 Pisum sativum HOM05D002159 ORTHO05D005625 3.2e-25 119.4 191 40.3
TPR.G8152 Trifolium pratense HOM05D002159 ORTHO05D005625 3.2e-25 119.4 188 40.4
TWI34G0379 Tripterygium wilfordii HOM05D002159 ORTHO05D005625 3.2e-25 119.4 106 60.4
CsaV3_3G017220 Cucumis sativus L. HOM05D002159 ORTHO05D005625 4.1e-25 119.0 188 42.6
Duzib205G0713 Durio zibethinus HOM05D002159 ORTHO05D005625 4.1e-25 119.0 190 41.1
MELO3C006919.2 Cucumis melo HOM05D002159 ORTHO05D005625 5.4e-25 118.6 188 42.0
Actinidia02884 Actinidia chinensis HOM05D002159 ORTHO05D005625 9.2e-25 117.9 74 82.4
Potri.001G231800 Populus trichocarpa HOM05D002159 ORTHO05D005625 1.2e-24 117.5 188 40.4
ATR0680G292 Amborella trichopoda HOM05D002159 ORTHO05D005625 1.6e-24 117.1 192 41.1
Lj2g0019958 Lotus japonicus HOM05D002159 ORTHO05D005625 1.6e-24 117.1 192 39.1
Nitab4.5_0004439g0160 Nicotiana tabacum HOM05D002159 ORTHO05D005625 1.6e-24 117.1 192 41.1
SGA_v2.0_scaffold10G05332 Striga asiatica HOM05D002159 ORTHO05D005625 1.6e-24 117.1 188 39.9
VMungo0464G2116 Vigna mungo HOM05D002159 ORTHO05D005625 1.6e-24 117.1 88 68.2
Glyma.09G136900 Glycine max HOM05D002159 ORTHO05D005625 2.0e-24 116.7 192 40.1
Lalb_Chr03g0034671 Lupinus albus HOM05D002159 ORTHO05D005625 2.0e-24 116.7 192 40.1
Solyc03g025540.3 Solanum lycopersicum HOM05D002159 ORTHO05D005625 2.0e-24 116.7 188 41.5
Sopen03g004380 Solanum pennellii HOM05D002159 ORTHO05D005625 2.0e-24 116.7 188 41.5
Glyma.16G182300 Glycine max HOM05D002159 ORTHO05D005625 2.7e-24 116.3 192 39.6
MD07G1272900 Malus domestica HOM05D002159 ORTHO05D005625 2.7e-24 116.3 188 40.4
THA.LOC104821393 Tarenaya hassleriana HOM05D002159 ORTHO05D005625 2.7e-24 116.3 188 41.0
AL6G35190 Arabidopsis lyrata HOM05D002159 ORTHO05D005625 3.5e-24 115.9 189 40.7
AT5G23880 Arabidopsis thaliana HOM05D002159 ORTHO05D005625 3.5e-24 115.9 189 40.7
C07p43800 Brassica napus HOM05D002159 ORTHO05D005625 3.5e-24 115.9 189 40.7
BolC7t44909H Brassica oleracea HOM05D002159 ORTHO05D005625 3.5e-24 115.9 189 40.7
Haze_13669 Corylus avellana HOM05D002159 ORTHO05D005625 3.5e-24 115.9 106 60.4
Nitab4.5_0000084g0030 Nicotiana tabacum HOM05D002159 ORTHO05D005625 3.5e-24 115.9 188 41.0
PSO478G3748 Papaver somniferum HOM05D002159 ORTHO05D005625 3.5e-24 115.9 83 68.7
Sp2g23400 Schrenkiella parvula HOM05D002159 ORTHO05D005625 3.5e-24 115.9 189 40.7
Sabra16G0139100 Salix brachista HOM05D002159 ORTHO05D005625 4.6e-24 115.5 188 39.9
BcaNung01838 Brassica carinata HOM05D002159 ORTHO05D005625 7.8e-24 114.8 189 40.2
DCAR_026334 Daucus carota HOM05D002159 ORTHO05D005625 7.8e-24 114.8 188 40.4
QL09p013785 Quercus lobata HOM05D002159 ORTHO05D005625 7.8e-24 114.8 106 59.4
Aa31LG11G3180 Aethionema arabicum HOM05D002159 ORTHO05D005625 1.0e-23 114.4 109 56.9
A06p34690 Brassica napus HOM05D002159 ORTHO05D005625 1.0e-23 114.4 189 40.2
BraA06t26396Z Brassica rapa HOM05D002159 ORTHO05D005625 1.0e-23 114.4 189 40.2
CiPaw.03G108100 Carya illinoinensis HOM05D002159 ORTHO05D005625 1.0e-23 114.4 106 59.4
COL.COLO4_28056 Corchorus olitorius HOM05D002159 ORTHO05D005625 1.0e-23 114.4 85 68.2
Glyma.11G170602 Glycine max HOM05D002159 ORTHO05D005625 1.0e-23 114.4 86 68.6
Os09g0569400 Oryza sativa ssp. japonica HOM05D002159 ORTHO05D005625 1.0e-23 114.4 91 60.4
PSO782G0249 Papaver somniferum HOM05D002159 ORTHO05D005625 1.0e-23 114.4 83 67.5
Peaxi162Scf00444g00532 Petunia axillaris HOM05D002159 ORTHO05D005625 1.0e-23 114.4 85 70.6
Sed0009742 Sechium edule HOM05D002159 ORTHO05D005625 1.0e-23 114.4 85 69.4
CARHR189680 Cardamine hirsuta HOM05D002159 ORTHO05D005625 1.3e-23 114.0 189 39.7
AL6G35160 Arabidopsis lyrata HOM05D002159 ORTHO05D005625 1.7e-23 113.6 195 39.5
ClCG05G008140 Citrullus lanatus HOM05D002201 ORTHO05D005625 2.3e-23 113.2 83 71.1
FvH4_7g29660 Fragaria vesca HOM05D002159 ORTHO05D005625 2.3e-23 113.2 87 66.7
FAN06G3579 Fragaria x ananassa HOM05D002159 ORTHO05D005625 2.3e-23 113.2 87 66.7
FAN06G4426 Fragaria x ananassa HOM05D002159 ORTHO05D005625 2.3e-23 113.2 87 66.7
CAN.G1175.3 Capsicum annuum HOM05D002159 ORTHO05D005625 3.0e-23 112.8 188 39.9
FAN10G0118 Fragaria x ananassa HOM05D002159 ORTHO05D005625 3.9e-23 112.5 87 65.5
Cfa023191 Carpinus fangiana HOM05D002159 ORTHO05D005625 5.0e-23 112.1 106 58.5
FAN01G0872 Fragaria x ananassa HOM05D002159 ORTHO05D005625 5.0e-23 112.1 87 65.5
FAN03G0857 Fragaria x ananassa HOM05D002159 ORTHO05D005625 5.0e-23 112.1 87 65.5
FAN03G1172 Fragaria x ananassa HOM05D002159 ORTHO05D005625 5.0e-23 112.1 87 65.5
Thecc.03G179100 Theobroma cacao HOM05D002159 ORTHO05D005625 5.0e-23 112.1 85 65.9
RcHm_v2.0_Chr1g0377671 Rosa chinensis HOM05D002159 ORTHO05D005625 6.6e-23 111.7 86 66.3
unitig_26.g10199 Utricularia gibba HOM05D002159 ORTHO05D005625 6.6e-23 111.7 189 37.6
Carub.0006s2160 Capsella rubella HOM05D002159 ORTHO05D005625 8.6e-23 111.3 85 67.1
Gohir.D12G258000 Gossypium hirsutum HOM05D002159 ORTHO05D005625 1.9e-22 110.2 190 37.4
PGR142G0288 Punica granatum HOM05D002159 ORTHO05D005625 1.9e-22 110.2 188 39.4
Gohir.A12G256700 Gossypium hirsutum HOM05D002159 ORTHO05D005625 3.3e-22 109.4 190 36.8
Gorai.008G276300 Gossypium raimondii HOM05D002159 ORTHO05D005625 7.3e-22 108.2 190 36.8
Eucgr.K00275 Eucalyptus grandis HOM05D002159 ORTHO05D005625 1.2e-21 107.5 188 40.4
Thhalv10003707m.g Eutrema salsugineum HOM05D002159 ORTHO05D005625 1.2e-21 107.5 85 65.9
MD01G1203600 Malus domestica HOM05D002159 ORTHO05D005625 1.6e-21 107.1 105 55.2
SHI10393 Sapria himalayana HOM05D002159 ORTHO05D005625 3.6e-21 105.9 94 57.4
PSO423G0230 Papaver somniferum HOM05D002159 ORTHO05D005625 1.1e-20 104.4 83 65.1
Zm00001eb162800 Zea mays HOM05D002159 ORTHO05D005625 2.0e-19 100.1 91 53.8
Pp3c9_11100 Physcomitrium patens HOM05D002159 ORTHO05D005625 4.4e-19 99.0 89 57.3
AagrBONN_evm.TU.Sc2ySwM_117.3689 Anthoceros agrestis HOM05D002159 ORTHO05D005625 1.3e-18 97.4 89 58.4
Psat0s2150g0160 Pisum sativum HOM05D002159 ORTHO05D005625 3.7e-18 95.9 67 70.1
Mapoly0007s0176 Marchantia polymorpha HOM05D002159 ORTHO05D005625 1.9e-17 93.6 89 53.9
Glyma.11G171001 Glycine max HOM05D002159 ORTHO05D005625 7.1e-17 91.7 67 68.7
CBR_g4749 Chara braunii HOM05D002159 ORTHO05D005625 9.2e-17 91.3 89 51.7
BcaB01g03611 Brassica carinata HOM05D002159 ORTHO05D024008 2.7e-16 89.7 74 62.2
SMO111G0062 Selaginella moellendorffii HOM05D002159 ORTHO05D005625 1.3e-15 87.4 85 49.4
Lj1A1000T74 Lonicera japonica HOM05D002159 ORTHO05D005625 3.9e-15 85.9 51 76.5
BcaNung05469 Brassica carinata HOM05D002159 ORTHO05D005625 8.6e-15 84.7 170 37.1
Dinv21000 Davidia involucrata HOM05D038216 ORTHO05D182180 3.3e-14 82.8 57 73.7
Cc02_g02790 Coffea canephora HOM05D002159 ORTHO05D005625 9.5e-14 81.3 52 73.1
RcHm_v2.0_Chr1g0378701 Rosa chinensis HOM05D002159 ORTHO05D005625 1.8e-12 77.0 50 70.0
RcHm_v2.0_Chr1g0379181 Rosa chinensis HOM05D002159 ORTHO05D005625 1.8e-12 77.0 50 70.0
RcHm_v2.0_Chr1g0379351 Rosa chinensis HOM05D002159 ORTHO05D005625 1.8e-12 77.0 50 70.0
MCO01G234 Micromonas commoda HOM05D002159 ORTHO05D005625 6.8e-12 75.1 85 44.7
MCO01G235 Micromonas commoda HOM05D002159 ORTHO05D005625 6.8e-12 75.1 85 44.7
Ah.13g068620 Amaranthus hybridus HOM05D002159 ORTHO05D005625 4.9e-10 68.9 107 43.0
Cc02_g02800 Coffea canephora HOM05D002159 ORTHO05D005625 4.6e-08 62.4 138 34.1
PRCOL_00000390 Prasinoderma coloniale HOM05D002159 ORTHO05D005625 7.8e-08 61.6 81 42.0
Actinidia34125 Actinidia chinensis HOM05D002159 ORTHO05D005625 2.3e-07 60.1 142 34.5
Haze_26919 Corylus avellana HOM05D002159 ORTHO05D005625 3.9e-07 59.3 90 40.0


User provided reference genes

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