Gene: RcHm_v2.0_Chr1g0379181

General Information

Structural Information

  • Species Rosa chinensis
  • Gene Identifier RcHm_v2.0_Chr1g0379181
  • Transcript Identifier RcHm_v2.0_Chr1g0379181
  • Gene Type Coding gene
  • Location RcHm_v2.0_Chr1 : 65303440-65305147 : negative

Gene Family Information

  • ID HOM05D002159
  • #Genes/#Species 310/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006378
IEA
InterPromRNA polyadenylation
GO:0006379
IEA
InterPromRNA cleavage
GO:0035194
ISO
PLAZA Integrative Orthologypost-transcriptional gene silencing by RNA AT5G23880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G23880
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G23880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005847
IEA
InterPromRNA cleavage and polyadenylation specificity factor complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G23880
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G23880
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G23880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR027075 Cleavage and polyadenylation specificity factor subunit 2
IPR001279 Metallo-beta-lactamase
IPR022712 Beta-Casp domain
Mapman id Description
16.3.1.2.2 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.component CPSF100/Ydh1