Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01990 Davidia involucrata HOM05D005639 ORTHO05D007234 6.4e-275 950.3 533 100.0
Dinv03058 Davidia involucrata HOM05D005639 ORTHO05D007234 1.5e-218 763.1 504 86.9
CSS0044875 Camellia sinensis var. sinensis HOM05D005639 ORTHO05D007234 4.6e-188 661.8 509 76.6
Rhsim13G0120200 Rhododendron simsii HOM05D005639 ORTHO05D007234 1.1e-186 657.1 505 76.4
vmacro03396 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 4.4e-183 645.2 505 76.0
Hma1.2p1_0333F.1_g128320 Hydrangea macrophylla HOM05D005639 ORTHO05D007234 2.1e-177 626.3 504 74.4
Atru.chr10.888 Acer truncatum HOM05D005639 ORTHO05D007234 1.1e-176 624.0 507 72.8
Ciclev10014949m.g Citrus clementina HOM05D005639 ORTHO05D007234 2.6e-175 619.4 504 73.4
Actinidia36001 Actinidia chinensis HOM05D005639 ORTHO05D007234 4.9e-174 615.1 509 73.7
DCAR_003859 Daucus carota HOM05D005639 ORTHO05D007234 1.4e-173 613.6 506 72.9
Prupe.4G089600 Prunus persica HOM05D005639 ORTHO05D007234 2.7e-172 609.4 503 71.4
MSTRG.13266 Avicennia marina HOM05D005639 ORTHO05D007234 1.9e-170 603.2 514 71.8
GSVIVG01021618001 Vitis vinifera HOM05D005639 ORTHO05D007234 1.9e-170 603.2 508 71.9
Nn5g27628 Nelumbo nucifera HOM05D005639 ORTHO05D007234 3.3e-170 602.4 507 71.6
CsaV3_5G039540 Cucumis sativus L. HOM05D005639 ORTHO05D007234 1.2e-169 600.5 499 71.7
ClCG08G001610 Citrullus lanatus HOM05D005639 ORTHO05D007234 3.6e-169 599.0 500 72.0
MD10G1254000 Malus domestica HOM05D005639 ORTHO05D007234 1.1e-168 597.4 502 70.5
Sed0017304 Sechium edule HOM05D005639 ORTHO05D007234 1.7e-166 590.1 503 68.2
PGSC0003DMG402021193 Solanum tuberosum HOM05D005639 ORTHO05D007234 1.1e-165 587.4 505 69.5
Nitab4.5_0004077g0020 Nicotiana tabacum HOM05D005639 ORTHO05D007234 9.2e-165 584.3 506 70.8
Sed0027243 Sechium edule HOM05D005639 ORTHO05D007234 9.2e-165 584.3 505 70.9
Cpa.g.sc19.212 Carica papaya HOM05D005639 ORTHO05D007234 1.2e-164 583.9 505 68.1
MELO3C022131.2 Cucumis melo HOM05D005639 ORTHO05D007234 2.3e-163 579.7 491 70.1
CiPaw.04G138400 Carya illinoinensis HOM05D005639 ORTHO05D007234 3.0e-163 579.3 505 67.7
Solyc02g069770.3 Solanum lycopersicum HOM05D005639 ORTHO05D007234 1.9e-162 576.6 504 70.4
Sopen02g018930 Solanum pennellii HOM05D005639 ORTHO05D007234 2.5e-162 576.2 504 70.2
Cfa016817 Carpinus fangiana HOM05D005639 ORTHO05D007234 3.3e-162 575.9 499 69.1
Nitab4.5_0002719g0080 Nicotiana tabacum HOM05D005639 ORTHO05D007234 7.3e-162 574.7 506 70.2
TWI73G0023 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 1.3e-161 573.9 508 67.7
Peaxi162Scf00670g00332 Petunia axillaris HOM05D005639 ORTHO05D007234 2.8e-161 572.8 504 71.0
Lsat_1_v5_gn_4_3900 Lactuca sativa HOM05D005639 ORTHO05D007234 6.2e-161 571.6 508 68.5
Haze_19855 Corylus avellana HOM05D005639 ORTHO05D007234 1.2e-159 567.4 520 66.9
MD05G1274300 Malus domestica HOM05D005639 ORTHO05D007234 1.2e-159 567.4 502 68.7
TWI09G1293 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 2.2e-158 563.1 525 65.9
FvH4_3g09990 Fragaria vesca HOM05D005639 ORTHO05D007234 2.9e-158 562.8 494 68.6
Thecc.06G000900 Theobroma cacao HOM05D005639 ORTHO05D007234 4.9e-158 562.0 510 67.5
Migut.H01334 Erythranthe guttata HOM05D005639 ORTHO05D007234 6.4e-158 561.6 388 78.1
SGA_v2.0_scaffold106G30666 Striga asiatica HOM05D005639 ORTHO05D007234 1.1e-157 560.8 420 75.7
HanXRQChr17g0569471 Helianthus annuus HOM05D005639 ORTHO05D007234 3.2e-157 559.3 499 65.9
Eucgr.D00190 Eucalyptus grandis HOM05D005639 ORTHO05D007234 2.7e-156 556.2 514 65.2
Cc09_g08220 Coffea canephora HOM05D005639 ORTHO05D007234 7.8e-156 554.7 519 65.3
ECA234G3170 Erigeron canadensis HOM05D005639 ORTHO05D007234 3.0e-155 552.7 429 74.8
COL.COLO4_26825 Corchorus olitorius HOM05D005639 ORTHO05D007234 1.1e-154 550.8 508 65.6
Sc24g0001380 Simmondsia chinensis HOM05D005639 ORTHO05D007234 2.5e-154 549.7 531 65.5
FAN25G3670 Fragaria x ananassa HOM05D005639 ORTHO05D007234 3.6e-153 545.8 495 67.9
TAR626G0701 Trochodendron aralioides HOM05D005639 ORTHO05D007234 4.8e-153 545.4 387 78.3
PGR083G2688 Punica granatum HOM05D005639 ORTHO05D007234 6.2e-153 545.0 485 67.6
FAN21G2832 Fragaria x ananassa HOM05D005639 ORTHO05D007234 1.5e-151 540.4 495 67.7
Hund22392 Selenicereus undatus HOM05D005639 ORTHO05D007234 2.0e-151 540.0 515 63.7
Lj6g0009484 Lotus japonicus HOM05D005639 ORTHO05D007234 3.4e-151 539.3 487 67.6
Gohir.A02G094000 Gossypium hirsutum HOM05D005639 ORTHO05D007234 4.2e-149 532.3 508 64.8
SalBow7G3138 Salvia bowleyana HOM05D005639 ORTHO05D007234 4.2e-149 532.3 548 63.0
VMungo0540G0794 Vigna mungo HOM05D005639 ORTHO05D007234 1.2e-148 530.8 486 65.6
QL03p009300 Quercus lobata HOM05D005639 ORTHO05D007234 2.7e-148 529.6 562 56.2
THA.LOC104812393 Tarenaya hassleriana HOM05D005639 ORTHO05D007234 1.8e-147 526.9 508 62.4
Gorai.005G118400 Gossypium raimondii HOM05D005639 ORTHO05D007234 2.3e-147 526.6 508 64.4
Lalb_Chr18g0057911 Lupinus albus HOM05D005639 ORTHO05D007234 3.0e-147 526.2 496 65.7
Gohir.D02G104300 Gossypium hirsutum HOM05D005639 ORTHO05D007234 8.7e-147 524.6 508 64.0
RcHm_v2.0_Chr5g0015871 Rosa chinensis HOM05D005639 ORTHO05D007234 1.5e-146 523.9 427 72.6
FAN16G1271 Fragaria x ananassa HOM05D005639 ORTHO05D007234 7.4e-146 521.5 505 60.0
Aqoxy1G01607 Aquilegia oxysepala HOM05D005639 ORTHO05D007234 1.6e-145 520.4 383 73.9
Phvul.006G129100 Phaseolus vulgaris HOM05D005639 ORTHO05D007234 3.7e-145 519.2 487 65.5
unitig_8.g4887 Utricularia gibba HOM05D005639 ORTHO05D007234 2.4e-144 516.5 509 63.7
arahy.Tifrunner.gnm1.ann1.JS3IU7 Arachis hypogaea HOM05D005639 ORTHO05D007234 2.6e-143 513.1 498 63.9
Manes.13G081200 Manihot esculenta HOM05D005639 ORTHO05D007234 4.5e-143 512.3 512 66.4
HPP92_013994 Vanilla planifolia HOM05D005639 ORTHO05D007234 5.8e-143 511.9 504 63.5
FAN11G3706 Fragaria x ananassa HOM05D005639 ORTHO05D007234 1.3e-142 510.8 501 60.9
Psat1g168120 Pisum sativum HOM05D005639 ORTHO05D007234 1.3e-142 510.8 488 65.6
Potri.007G107900 Populus trichocarpa HOM05D005639 ORTHO05D007234 8.4e-142 508.1 508 62.2
THA.LOC104806253 Tarenaya hassleriana HOM05D005639 ORTHO05D007234 5.5e-141 505.4 503 61.6
vmacro03440 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 1.2e-140 504.2 504 60.9
Oeu030450.1 Olea europaea HOM05D005639 ORTHO05D007234 4.6e-140 502.3 483 59.2
ATR0165G031 Amborella trichopoda HOM05D005639 ORTHO05D007234 6.0e-140 501.9 508 64.4
Aa31LG9G9170 Aethionema arabicum HOM05D005639 ORTHO05D007234 3.0e-139 499.6 484 65.7
Glyma.09G023100 Glycine max HOM05D005639 ORTHO05D007234 5.1e-139 498.8 426 69.5
PSO675G8746 Papaver somniferum HOM05D005639 ORTHO05D007234 1.1e-138 497.7 509 62.5
CiPaw.02G032400 Carya illinoinensis HOM05D005639 ORTHO05D007234 1.9e-138 496.9 505 58.4
Ah.14g085710 Amaranthus hybridus HOM05D005639 ORTHO05D007234 1.6e-137 493.8 511 59.9
PSO541G1457 Papaver somniferum HOM05D005639 ORTHO05D007234 1.6e-137 493.8 506 61.9
Potri.005G061000 Populus trichocarpa HOM05D005639 ORTHO05D007234 2.8e-137 493.0 500 60.6
arahy.Tifrunner.gnm1.ann1.MSHM5J Arachis hypogaea HOM05D005639 ORTHO05D007234 3.7e-137 492.7 496 62.3
Sabra05G0051400 Salix brachista HOM05D005639 ORTHO05D007234 6.2e-137 491.9 508 58.7
Sabra07G0088400 Salix brachista HOM05D005639 ORTHO05D007234 5.8e-135 485.3 504 62.5
Ca_00807_v3 Cicer arietinum L. HOM05D005639 ORTHO05D007234 6.5e-134 481.9 383 71.3
Medtr2g029940 Medicago truncatula HOM05D005639 ORTHO05D007234 6.7e-131 471.9 496 61.5
AT4G21130 Arabidopsis thaliana HOM05D005639 ORTHO05D007234 5.3e-128 462.2 490 53.5
CiPaw.10G033400 Carya illinoinensis HOM05D005639 ORTHO05D007234 2.0e-127 460.3 524 54.4
Zm00001eb218720 Zea mays HOM05D005639 ORTHO05D007234 2.0e-127 460.3 462 63.9
CARHR252170 Cardamine hirsuta HOM05D005639 ORTHO05D007234 5.9e-127 458.8 506 57.9
CDE05G0927 Ceratophyllum demersum HOM05D005639 ORTHO05D007234 5.9e-127 458.8 508 58.9
Thhalv10028589m.g Eutrema salsugineum HOM05D005639 ORTHO05D007234 1.1e-125 454.5 464 60.6
EL10Ac4g08968 Beta vulgaris HOM05D005639 ORTHO05D007234 5.5e-125 452.2 501 61.7
Sp6g03680 Schrenkiella parvula HOM05D005639 ORTHO05D007234 5.5e-125 452.2 492 58.7
AUR62033065 Chenopodium quinoa HOM05D005639 ORTHO05D007234 1.4e-123 447.6 395 62.5
C09p32350 Brassica napus HOM05D005639 ORTHO05D007234 3.9e-123 446.0 489 59.1
BolC9t56080H Brassica oleracea HOM05D005639 ORTHO05D007234 2.5e-122 443.4 489 56.4
BraA09t38117Z Brassica rapa HOM05D005639 ORTHO05D007234 5.7e-122 442.2 489 57.5
Zm00001eb050650 Zea mays HOM05D005639 ORTHO05D007234 5.7e-122 442.2 423 65.0
BcaB01g02559 Brassica carinata HOM05D005639 ORTHO05D007234 2.8e-121 439.9 488 59.8
AL7G32990 Arabidopsis lyrata HOM05D005639 ORTHO05D007234 4.8e-121 439.1 504 53.0
Carub.0006s3332 Capsella rubella HOM05D005639 ORTHO05D007234 8.2e-121 438.3 467 56.3
A03p30310 Brassica napus HOM05D005639 ORTHO05D007234 3.1e-120 436.4 492 59.6
A09p25350 Brassica napus HOM05D005639 ORTHO05D007234 2.6e-119 433.3 487 56.9
C03p36580 Brassica napus HOM05D005639 ORTHO05D007234 3.4e-119 433.0 497 58.8
AL6G49000 Arabidopsis lyrata HOM05D005639 ORTHO05D007234 1.4e-117 427.6 464 58.2
AT4G05410 Arabidopsis thaliana HOM05D005639 ORTHO05D007234 1.6e-116 424.1 464 59.9
BcaC01g06663 Brassica carinata HOM05D005639 ORTHO05D007234 3.9e-115 419.5 490 57.6
BolC3t15973H Brassica oleracea HOM05D005639 ORTHO05D007234 8.8e-115 418.3 493 57.2
Mapoly0012s0170 Marchantia polymorpha HOM05D005639 ORTHO05D007234 2.6e-114 416.8 515 55.5
BraA03t12214Z Brassica rapa HOM05D005639 ORTHO05D007234 9.7e-114 414.8 490 57.3
Os03g0625900 Oryza sativa ssp. japonica HOM05D005639 ORTHO05D007234 9.7e-114 414.8 501 57.5
AUR62042204 Chenopodium quinoa HOM05D005639 ORTHO05D007234 3.8e-110 402.9 398 58.0
HanXRQChr13g0407861 Helianthus annuus HOM05D005639 ORTHO05D007234 3.1e-104 383.3 396 61.1
AagrBONN_evm.TU.Sc2ySwM_228.3905 Anthoceros agrestis HOM05D005639 ORTHO05D007234 1.2e-103 381.3 410 58.8
Pp3c13_22280 Physcomitrium patens HOM05D005639 ORTHO05D007234 3.1e-96 356.7 521 49.9
Pp3c15_1000 Physcomitrium patens HOM05D005639 ORTHO05D007234 5.4e-96 355.9 524 49.2
Actinidia13477 Actinidia chinensis HOM05D005639 ORTHO05D007234 4.7e-92 342.8 286 69.6
SMO146G0033 Selaginella moellendorffii HOM05D005639 ORTHO05D007234 1.3e-86 324.7 443 50.6
Glyma.15G129100 Glycine max HOM05D005639 ORTHO05D007234 8.3e-81 305.4 251 61.0
CBR_g50978 Chara braunii HOM05D005639 ORTHO05D007234 2.3e-78 297.4 536 44.6
Actinidia13478 Actinidia chinensis HOM05D005639 ORTHO05D007234 1.1e-72 278.5 171 78.9
MCO15G200 Micromonas commoda HOM05D005639 ORTHO05D007234 1.2e-58 231.9 536 34.5
PRCOL_00004480 Prasinoderma coloniale HOM05D005639 ORTHO05D007234 3.9e-54 216.9 471 38.4
C06p38580 Brassica napus HOM05D005639 ORTHO05D007234 2.1e-47 194.5 278 42.4
Duzib235G0447 Durio zibethinus HOM05D005639 ORTHO05D007234 3.5e-47 193.7 223 47.5
Cre06.g278175 Chlamydomonas reinhardtii HOM05D005639 ORTHO05D007234 1.7e-41 174.9 461 30.4
BolC6t38950H Brassica oleracea HOM05D005639 ORTHO05D007234 7.1e-40 169.5 251 41.8
Cfa027057 Carpinus fangiana HOM05D005639 ORTHO05D007234 2.4e-27 127.9 589 25.5
BcaB01g02186 Brassica carinata HOM05D005639 ORTHO05D007234 3.2e-24 117.5 133 48.1
BcaC04g22046 Brassica carinata HOM05D001874 ORTHO05D002166 8.2e-20 102.8 84 60.7
BcaB07g31331 Brassica carinata HOM05D005639 ORTHO05D007234 3.1e-19 100.9 84 59.5
A08p03340 Brassica napus HOM05D005639 ORTHO05D001462 3.4e-18 97.4 84 58.3
A01p33050 Brassica napus HOM05D001874 ORTHO05D002166 2.3e-14 84.7 164 36.6
C08p21980 Brassica napus HOM05D005639 ORTHO05D002166 1.1e-13 82.4 166 36.7
BcaB03g11915 Brassica carinata HOM05D005639 ORTHO05D007234 6.3e-12 76.6 133 36.1
Oeu020857.1 Olea europaea HOM05D005639 ORTHO05D290761 1.8e-11 75.1 150 45.3
Duzib235G0476 Durio zibethinus HOM05D005639 ORTHO05D007234 1.2e-10 72.4 109 52.3
Rhsim12G0161600 Rhododendron simsii HOM05D000453 ORTHO05D000387 3.9e-06 57.4 117 32.5


User provided reference genes

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