Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01550 Davidia involucrata HOM05D001045 ORTHO05D004836 2.7e-33 146.0 71 100.0
Dinv15328 Davidia involucrata HOM05D001045 ORTHO05D004836 1.7e-24 116.7 57 98.2
Dinv11158 Davidia involucrata HOM05D001045 ORTHO05D004836 6.1e-22 108.2 57 91.2
COL.COLO4_28086 Corchorus olitorius HOM05D001045 ORTHO05D004836 2.4e-18 96.3 57 80.7
Duzib205G1644 Durio zibethinus HOM05D001045 ORTHO05D004836 5.4e-18 95.1 57 75.4
TAR629G1776 Trochodendron aralioides HOM05D001045 ORTHO05D004836 7.0e-18 94.7 57 78.9
Potri.012G095800 Populus trichocarpa HOM05D001045 ORTHO05D004836 9.2e-18 94.4 54 83.3
Haze_07234 Corylus avellana HOM05D001045 ORTHO05D004836 2.0e-17 93.2 63 74.6
Ciclev10018763m.g Citrus clementina HOM05D001045 ORTHO05D004836 2.7e-17 92.8 58 74.1
Gohir.A07G051700 Gossypium hirsutum HOM05D001045 ORTHO05D004836 2.7e-17 92.8 56 76.8
Gohir.D07G056200 Gossypium hirsutum HOM05D001045 ORTHO05D004836 2.7e-17 92.8 56 76.8
Gorai.001G059600 Gossypium raimondii HOM05D001045 ORTHO05D004836 2.7e-17 92.8 56 76.8
Sabra12G0070200 Salix brachista HOM05D001045 ORTHO05D004836 3.5e-17 92.4 58 75.9
CSS0020803 Camellia sinensis var. sinensis HOM05D001045 ORTHO05D004836 1.0e-16 90.9 57 78.9
Oeu030250.2 Olea europaea HOM05D001045 ORTHO05D004836 1.3e-16 90.5 58 72.4
Thecc.03G126800 Theobroma cacao HOM05D001045 ORTHO05D004836 1.3e-16 90.5 57 77.2
Sc04g0000750 Simmondsia chinensis HOM05D001045 ORTHO05D004836 1.7e-16 90.1 61 73.8
Lj9C477G11 Lonicera japonica HOM05D001045 ORTHO05D004836 2.9e-16 89.4 60 76.7
Potri.015G093600 Populus trichocarpa HOM05D001045 ORTHO05D004836 3.8e-16 89.0 62 71.0
GSVIVG01008515001 Vitis vinifera HOM05D001045 ORTHO05D004836 3.8e-16 89.0 58 74.1
Gohir.A03G053500 Gossypium hirsutum HOM05D001045 ORTHO05D004836 5.0e-16 88.6 54 75.9
Manes.14G052700 Manihot esculenta HOM05D001045 ORTHO05D004836 5.0e-16 88.6 57 73.7
QL10p004119 Quercus lobata HOM05D001045 ORTHO05D004836 6.6e-16 88.2 57 73.7
Gohir.D03G113500 Gossypium hirsutum HOM05D001045 ORTHO05D004836 8.6e-16 87.8 54 75.9
Gorai.003G119600 Gossypium raimondii HOM05D001045 ORTHO05D004836 8.6e-16 87.8 54 75.9
CiPaw.12G041700 Carya illinoinensis HOM05D001045 ORTHO05D004836 1.1e-15 87.4 64 71.9
Nn3g16511 Nelumbo nucifera HOM05D001045 ORTHO05D004836 4.3e-15 85.5 57 70.2
TWI14G1089 Tripterygium wilfordii HOM05D001045 ORTHO05D004836 5.6e-15 85.1 55 74.5
Cfa018840 Carpinus fangiana HOM05D001045 ORTHO05D004836 1.2e-14 84.0 63 69.8
Actinidia15837 Actinidia chinensis HOM05D001045 ORTHO05D004836 1.6e-14 83.6 58 72.4
Peaxi162Scf00089g00522 Petunia axillaris HOM05D001045 ORTHO05D004836 2.8e-14 82.8 57 66.7
Cc03_g13140 Coffea canephora HOM05D001045 ORTHO05D004836 3.6e-14 82.4 57 66.7
Glyma.06G171400 Glycine max HOM05D001045 ORTHO05D004836 3.6e-14 82.4 54 72.2
Lalb_Chr23g0273561 Lupinus albus HOM05D001045 ORTHO05D004836 4.7e-14 82.0 54 74.1
Nitab4.5_0003680g0020 Nicotiana tabacum HOM05D001045 ORTHO05D004836 4.7e-14 82.0 57 70.2
arahy.Tifrunner.gnm1.ann1.3PZ9PI Arachis hypogaea HOM05D001045 ORTHO05D004836 6.1e-14 81.6 57 68.4
Nitab4.5_0003005g0050 Nicotiana tabacum HOM05D001045 ORTHO05D004836 6.1e-14 81.6 57 68.4
PGSC0003DMG401015244 Solanum tuberosum HOM05D001045 ORTHO05D004836 8.0e-14 81.3 57 66.7
CANSAT80G0692 Cannabis sativa HOM05D001045 ORTHO05D004836 1.0e-13 80.9 55 67.3
Solyc03g111260.3 Solanum lycopersicum HOM05D001045 ORTHO05D004836 1.0e-13 80.9 57 64.9
Sopen03g030390 Solanum pennellii HOM05D001045 ORTHO05D004836 1.0e-13 80.9 57 64.9
ClCG06G017790 Citrullus lanatus HOM05D001045 ORTHO05D004836 1.4e-13 80.5 58 65.5
Lalb_Chr11g0069641 Lupinus albus HOM05D001045 ORTHO05D004836 1.4e-13 80.5 57 68.4
Atru.chr9.1079 Acer truncatum HOM05D001045 ORTHO05D004836 1.8e-13 80.1 58 65.5
arahy.Tifrunner.gnm1.ann1.3BP915 Arachis hypogaea HOM05D001045 ORTHO05D004836 1.8e-13 80.1 57 66.7
Actinidia08863 Actinidia chinensis HOM05D001045 ORTHO05D004836 2.3e-13 79.7 57 68.4
TAR371G0766 Trochodendron aralioides HOM05D001045 ORTHO05D004836 3.0e-13 79.3 57 70.2
Actinidia25588 Actinidia chinensis HOM05D001045 ORTHO05D004836 4.0e-13 79.0 57 70.2
Cpa.g.sc13.140 Carica papaya HOM05D001045 ORTHO05D004836 4.0e-13 79.0 54 68.5
SGA_v2.0_scaffold215G42334 Striga asiatica HOM05D001045 ORTHO05D004836 4.0e-13 79.0 57 63.2
Glyma.04G194600 Glycine max HOM05D001045 ORTHO05D004836 5.2e-13 78.6 53 69.8
Sabra15G0115200 Salix brachista HOM05D001045 ORTHO05D004836 5.2e-13 78.6 58 65.5
Migut.I00512 Erythranthe guttata HOM05D001045 ORTHO05D004836 8.9e-13 77.8 57 66.7
Lj1g0009758 Lotus japonicus HOM05D001045 ORTHO05D004836 8.9e-13 77.8 57 66.7
Prupe.5G152800 Prunus persica HOM05D001045 ORTHO05D004836 8.9e-13 77.8 57 64.9
Sed0018235 Sechium edule HOM05D001045 ORTHO05D004836 8.9e-13 77.8 58 65.5
MSTRG.22907 Avicennia marina HOM05D001045 ORTHO05D004836 1.5e-12 77.0 57 59.6
Eucgr.B00129 Eucalyptus grandis HOM05D001045 ORTHO05D004836 2.6e-12 76.3 57 64.9
CAN.G352.26 Capsicum annuum HOM05D001045 ORTHO05D004836 4.4e-12 75.5 57 63.2
CsaV3_1G000660 Cucumis sativus L. HOM05D001045 ORTHO05D004836 4.4e-12 75.5 58 62.1
RcHm_v2.0_Chr7g0190431 Rosa chinensis HOM05D001045 ORTHO05D004836 4.4e-12 75.5 57 63.2
EL10As4g23417 Beta vulgaris HOM05D001045 ORTHO05D004836 5.7e-12 75.1 57 59.6
MELO3C026230.2 Cucumis melo HOM05D001045 ORTHO05D004836 5.7e-12 75.1 58 63.8
PGR083G0639 Punica granatum HOM05D001045 ORTHO05D004836 5.7e-12 75.1 57 64.9
Ca_24509_v3 Cicer arietinum L. HOM05D001045 ORTHO05D004836 7.5e-12 74.7 57 66.7
Ah.11g045420 Amaranthus hybridus HOM05D001045 ORTHO05D004836 9.8e-12 74.3 59 61.0
TPR.G26154 Trifolium pratense HOM05D001045 ORTHO05D004836 1.3e-11 73.9 57 63.2
Carub.0008s2413 Capsella rubella HOM05D001045 ORTHO05D004836 1.7e-11 73.6 57 64.9
Psat5g139840 Pisum sativum HOM05D001045 ORTHO05D004836 2.2e-11 73.2 57 66.7
Aa31LG1G18610 Aethionema arabicum HOM05D001045 ORTHO05D004836 2.9e-11 72.8 57 61.4
Medtr3g089020 Medicago truncatula HOM05D001045 ORTHO05D004836 2.9e-11 72.8 57 63.2
AUR62029637 Chenopodium quinoa HOM05D001045 ORTHO05D004836 3.7e-11 72.4 56 62.5
Phvul.009G167400 Phaseolus vulgaris HOM05D001045 ORTHO05D004836 3.7e-11 72.4 54 59.3
FvH4_5g07980 Fragaria vesca HOM05D001045 ORTHO05D004836 4.9e-11 72.0 57 61.4
FAN08G1251 Fragaria x ananassa HOM05D001045 ORTHO05D004836 4.9e-11 72.0 57 61.4
FAN18G0261 Fragaria x ananassa HOM05D001045 ORTHO05D004836 4.9e-11 72.0 57 61.4
FAN18G4157 Fragaria x ananassa HOM05D001045 ORTHO05D004836 4.9e-11 72.0 57 61.4
VMungo1309G1741 Vigna mungo HOM05D001045 ORTHO05D004836 4.9e-11 72.0 54 61.1
arahy.Tifrunner.gnm1.ann1.XN7UED Arachis hypogaea HOM05D001045 ORTHO05D004836 6.4e-11 71.6 55 63.6
Glyma.17G128500 Glycine max HOM05D001045 ORTHO05D004836 6.4e-11 71.6 57 64.9
arahy.Tifrunner.gnm1.ann1.B3AG7P Arachis hypogaea HOM05D001045 ORTHO05D004836 8.3e-11 71.2 55 63.6
BcaC01g02587 Brassica carinata HOM05D001045 ORTHO05D004836 8.3e-11 71.2 59 57.6
BolC3t18571H Brassica oleracea HOM05D001045 ORTHO05D004836 8.3e-11 71.2 59 57.6
AUR62025919 Chenopodium quinoa HOM05D001045 ORTHO05D004836 8.3e-11 71.2 56 60.7
DCAR_016404 Daucus carota HOM05D001045 ORTHO05D004836 1.1e-10 70.9 57 59.6
FAN04G1508 Fragaria x ananassa HOM05D001045 ORTHO05D004836 1.4e-10 70.5 55 61.8
Peaxi162Scf00536g00312 Petunia axillaris HOM05D001045 ORTHO05D004836 2.4e-10 69.7 57 57.9
VMungo1215G2889 Vigna mungo HOM05D001045 ORTHO05D004836 2.4e-10 69.7 57 61.4
A06p30050 Brassica napus HOM05D001045 ORTHO05D004836 3.2e-10 69.3 59 55.9
C03p63160 Brassica napus HOM05D001045 ORTHO05D004836 3.2e-10 69.3 59 55.9
BraA06t25957Z Brassica rapa HOM05D001045 ORTHO05D004836 3.2e-10 69.3 59 55.9
Psat4g062560 Pisum sativum HOM05D001045 ORTHO05D004836 3.2e-10 69.3 57 61.4
THA.LOC104798948 Tarenaya hassleriana HOM05D001045 ORTHO05D004836 3.2e-10 69.3 57 52.6
AT5G63420 Arabidopsis thaliana HOM05D001045 ORTHO05D004836 4.1e-10 68.9 59 57.6
Ca_00917_v3 Cicer arietinum L. HOM05D001045 ORTHO05D004836 4.1e-10 68.9 57 61.4
DCAR_026220 Daucus carota HOM05D001045 ORTHO05D004836 4.1e-10 68.9 57 56.1
CARHR277280 Cardamine hirsuta HOM05D001045 ORTHO05D004836 5.4e-10 68.6 57 59.6
AL8G40490 Arabidopsis lyrata HOM05D001045 ORTHO05D004836 7.0e-10 68.2 57 59.6
MD06G1143600 Malus domestica HOM05D001045 ORTHO05D004836 7.0e-10 68.2 55 61.8
Thhalv10003624m.g Eutrema salsugineum HOM05D001045 ORTHO05D004836 9.2e-10 67.8 57 57.9
MD14G1158900 Malus domestica HOM05D001045 ORTHO05D004836 9.2e-10 67.8 55 61.8
Sp2g26510 Schrenkiella parvula HOM05D001045 ORTHO05D004836 9.2e-10 67.8 57 57.9
MBI16_g26173_MAGBIO Magnolia biondii HOM05D001045 ORTHO05D004836 1.2e-09 67.4 57 57.9
ECA240G2390 Erigeron canadensis HOM05D001045 ORTHO05D004836 1.6e-09 67.0 58 63.8
unitig_27.g25101 Utricularia gibba HOM05D001045 ORTHO05D004836 2.0e-09 66.6 58 50.0
PSO478G0896 Papaver somniferum HOM05D001045 ORTHO05D004836 2.7e-09 66.2 57 54.4
PSO017G5689 Papaver somniferum HOM05D001045 ORTHO05D004836 7.8e-09 64.7 57 52.6
HanXRQChr03g0064991 Helianthus annuus HOM05D001045 ORTHO05D004836 1.0e-08 64.3 57 63.2
Medtr4g103770 Medicago truncatula HOM05D001045 ORTHO05D004836 1.0e-08 64.3 60 55.0
MBI11_g06773_MAGBIO Magnolia biondii HOM05D001045 ORTHO05D004836 1.7e-08 63.5 61 50.8
HPP92_008938 Vanilla planifolia HOM05D001045 ORTHO05D004836 6.6e-08 61.6 43 60.5
Aqoxy3G01499 Aquilegia oxysepala HOM05D001045 ORTHO05D004836 1.5e-07 60.5 57 52.6
Rhsim08G0188700 Rhododendron simsii HOM05D001045 ORTHO05D004836 3.3e-07 59.3 57 56.1
Dinv04874 Davidia involucrata HOM05D001045 ORTHO05D004836 5.6e-07 58.5 28 96.4
Hund02428 Selenicereus undatus HOM05D001045 ORTHO05D004836 9.5e-07 57.8 50 52.0
vmacro16670 Vaccinium macrocarpon HOM05D001045 ORTHO05D004836 9.5e-07 57.8 47 63.8
vmacro19213 Vaccinium macrocarpon HOM05D001045 ORTHO05D004836 1.2e-06 57.4 57 54.4
Phvul.003G209600 Phaseolus vulgaris HOM05D001045 ORTHO05D004836 2.8e-06 56.2 54 53.7
CDE04G0888 Ceratophyllum demersum HOM05D001045 ORTHO05D004836 3.6e-06 55.8 57 52.6
CDE07G0011 Ceratophyllum demersum HOM05D001045 ORTHO05D004836 3.6e-06 55.8 57 52.6


User provided reference genes

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