Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026201 Daucus carota HOM05D000329 ORTHO05D002132 6.6e-41 170.2 84 100.0
DCAR_026204 Daucus carota HOM05D000329 ORTHO05D012722 6.6e-41 170.2 84 100.0
DCAR_032188 Daucus carota HOM05D000329 ORTHO05D012722 4.3e-40 167.5 84 98.8
DCAR_026205 Daucus carota HOM05D000329 ORTHO05D012722 8.0e-39 163.3 84 96.4
DCAR_023887 Daucus carota HOM05D000329 ORTHO05D012722 2.2e-36 155.2 84 92.9
DCAR_005433 Daucus carota HOM05D000329 ORTHO05D012722 6.8e-30 133.7 80 85.0
DCAR_023884 Daucus carota HOM05D000329 ORTHO05D002132 1.7e-28 129.0 80 81.2
DCAR_023886 Daucus carota HOM05D000329 ORTHO05D012722 3.2e-27 124.8 65 95.4
DCAR_026203 Daucus carota HOM05D000329 ORTHO05D002132 2.7e-26 121.7 80 77.5
DCAR_023883 Daucus carota HOM05D000329 ORTHO05D002132 6.6e-25 117.1 80 73.8
DCAR_026202 Daucus carota HOM05D000329 ORTHO05D002132 1.8e-22 109.0 80 71.2
Gohir.A09G244800 Gossypium hirsutum HOM05D000329 ORTHO05D002132 7.3e-16 87.0 73 61.6
TWI09G0874 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 9.5e-16 86.7 79 58.2
TWI39G0078 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 9.5e-16 86.7 79 58.2
Potri.012G092400 Populus trichocarpa HOM05D000329 ORTHO05D002132 1.6e-15 85.9 67 65.7
TWI23G0872 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 2.8e-15 85.1 67 62.7
Manes.14G055900 Manihot esculenta HOM05D000329 ORTHO05D002132 4.7e-15 84.3 67 65.7
Cc04_g10620 Coffea canephora HOM05D000329 ORTHO05D002132 6.2e-15 84.0 77 61.0
COL.COLO4_07696 Corchorus olitorius HOM05D000329 ORTHO05D002132 6.2e-15 84.0 73 60.3
Dinv38483 Davidia involucrata HOM05D000329 ORTHO05D002132 6.2e-15 84.0 78 62.8
MD14G1165600 Malus domestica HOM05D000329 ORTHO05D002132 6.2e-15 84.0 76 59.2
Manes.06G114100 Manihot esculenta HOM05D000329 ORTHO05D002132 6.2e-15 84.0 76 61.8
Ah.15g095410 Amaranthus hybridus HOM05D000329 ORTHO05D002132 8.1e-15 83.6 76 59.2
Cpa.g.sc4.49 Carica papaya HOM05D000329 ORTHO05D002132 8.1e-15 83.6 76 56.6
Gohir.A07G054000 Gossypium hirsutum HOM05D000329 ORTHO05D002132 8.1e-15 83.6 71 62.0
Gohir.D07G058400 Gossypium hirsutum HOM05D000329 ORTHO05D002132 8.1e-15 83.6 71 62.0
Gohir.D09G245700 Gossypium hirsutum HOM05D000329 ORTHO05D002132 8.1e-15 83.6 73 60.3
Gorai.001G061900 Gossypium raimondii HOM05D000329 ORTHO05D002132 8.1e-15 83.6 71 62.0
Gorai.006G270100 Gossypium raimondii HOM05D000329 ORTHO05D002132 8.1e-15 83.6 73 60.3
Potri.015G089000 Populus trichocarpa HOM05D000329 ORTHO05D002132 8.1e-15 83.6 67 62.7
Sopen03g030710 Solanum pennellii HOM05D000329 ORTHO05D002132 8.1e-15 83.6 67 61.2
PGSC0003DMG400015167 Solanum tuberosum HOM05D000329 ORTHO05D002132 8.1e-15 83.6 67 61.2
Peaxi162Scf00089g00844 Petunia axillaris HOM05D000329 ORTHO05D002132 1.1e-14 83.2 69 60.9
Duzib084G0575 Durio zibethinus HOM05D000329 ORTHO05D002132 1.4e-14 82.8 73 58.9
MD06G1159300 Malus domestica HOM05D000329 ORTHO05D002132 1.8e-14 82.4 67 62.7
Aa31LG4G17010 Aethionema arabicum HOM05D000329 ORTHO05D002132 2.4e-14 82.0 76 56.6
CsaV3_1G009200 Cucumis sativus L. HOM05D000329 ORTHO05D002132 2.4e-14 82.0 67 61.2
Nitab4.5_0002531g0100 Nicotiana tabacum HOM05D000329 ORTHO05D002132 2.4e-14 82.0 67 61.2
Solyc03g111590.4 Solanum lycopersicum HOM05D000329 ORTHO05D002132 2.4e-14 82.0 67 59.7
MELO3C002327.2 Cucumis melo HOM05D000329 ORTHO05D002132 3.1e-14 81.6 67 61.2
DCAR_016424 Daucus carota HOM05D000329 ORTHO05D002132 3.1e-14 81.6 77 55.8
Actinidia16199 Actinidia chinensis HOM05D000329 ORTHO05D002132 4.0e-14 81.3 78 56.4
Ciclev10018473m.g Citrus clementina HOM05D000329 ORTHO05D002132 4.0e-14 81.3 67 61.2
Dinv11116 Davidia involucrata HOM05D000329 ORTHO05D002132 5.2e-14 80.9 76 59.2
Oeu023470.1 Olea europaea HOM05D000329 ORTHO05D002132 5.2e-14 80.9 72 58.3
Nitab4.5_0001360g0100 Nicotiana tabacum HOM05D000329 ORTHO05D002132 6.8e-14 80.5 67 59.7
CAN.G472.44 Capsicum annuum HOM05D000329 ORTHO05D002132 8.9e-14 80.1 67 59.7
AUR62025745 Chenopodium quinoa HOM05D000329 ORTHO05D002132 8.9e-14 80.1 78 51.3
Sed0027086 Sechium edule HOM05D000329 ORTHO05D002132 8.9e-14 80.1 79 54.4
Migut.I00266 Erythranthe guttata HOM05D000329 ORTHO05D002132 1.2e-13 79.7 70 58.6
FvH4_5g07090 Fragaria vesca HOM05D000329 ORTHO05D002132 1.2e-13 79.7 73 57.5
FAN18G2482 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.2e-13 79.7 73 57.5
Lj9C473T12 Lonicera japonica HOM05D000329 ORTHO05D002132 1.2e-13 79.7 76 55.3
Prupe.5G159200 Prunus persica HOM05D000329 ORTHO05D002132 1.2e-13 79.7 85 51.8
ClCG03G003410 Citrullus lanatus HOM05D000329 ORTHO05D002132 1.5e-13 79.3 79 54.4
FAN04G3077 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.5e-13 79.3 73 57.5
FAN08G1572 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.5e-13 79.3 73 57.5
FAN13G2326 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.5e-13 79.3 73 57.5
Nn4g22484 Nelumbo nucifera HOM05D000329 ORTHO05D002132 1.5e-13 79.3 76 55.3
Rhsim12G0171300 Rhododendron simsii HOM05D000329 ORTHO05D002132 1.5e-13 79.3 67 61.2
Thecc.03G121300 Theobroma cacao HOM05D000329 ORTHO05D002132 2.0e-13 79.0 73 56.2
CANSAT80G2211 Cannabis sativa HOM05D000329 ORTHO05D002132 2.6e-13 78.6 67 56.7
RcHm_v2.0_Chr7g0191461 Rosa chinensis HOM05D000329 ORTHO05D002132 3.4e-13 78.2 67 55.2
Hund05623 Selenicereus undatus HOM05D000329 ORTHO05D002132 3.4e-13 78.2 67 56.7
Lsat_1_v5_gn_1_28420 Lactuca sativa HOM05D000329 ORTHO05D002132 4.4e-13 77.8 70 57.1
PSO782G4118 Papaver somniferum HOM05D000329 ORTHO05D002132 4.4e-13 77.8 67 59.7
AUR62001265 Chenopodium quinoa HOM05D000329 ORTHO05D002132 7.6e-13 77.0 67 55.2
THA.LOC104821500 Tarenaya hassleriana HOM05D000329 ORTHO05D002132 7.6e-13 77.0 67 58.2
MSTRG.22937 Avicennia marina HOM05D000329 ORTHO05D002132 9.9e-13 76.6 78 52.6
Lsat_1_v5_gn_1_28820 Lactuca sativa HOM05D000329 ORTHO05D002132 9.9e-13 76.6 68 55.9
Sp5g13600 Schrenkiella parvula HOM05D000329 ORTHO05D002132 9.9e-13 76.6 76 53.9
Atru.chr9.995 Acer truncatum HOM05D000329 ORTHO05D002132 1.3e-12 76.3 68 60.3
Ca_05569_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002132 1.3e-12 76.3 67 58.2
Nn3g16603 Nelumbo nucifera HOM05D000329 ORTHO05D002132 1.3e-12 76.3 67 56.7
HanXRQChr04g0100761 Helianthus annuus HOM05D000329 ORTHO05D002132 1.7e-12 75.9 75 56.0
Oeu045488.1 Olea europaea HOM05D000329 ORTHO05D002132 1.7e-12 75.9 72 54.2
unitig_26.g9676 Utricularia gibba HOM05D000329 ORTHO05D002132 1.7e-12 75.9 66 57.6
MSTRG.11301 Avicennia marina HOM05D000329 ORTHO05D002132 2.2e-12 75.5 75 56.0
BcaB01g00810 Brassica carinata HOM05D000329 ORTHO05D002132 2.2e-12 75.5 67 52.2
A06p19240 Brassica napus HOM05D000329 ORTHO05D002132 2.2e-12 75.5 67 53.7
C08p23440 Brassica napus HOM05D000329 ORTHO05D002132 2.2e-12 75.5 67 53.7
BolC8t49972H Brassica oleracea HOM05D000329 ORTHO05D002132 2.2e-12 75.5 67 53.7
BraA06t25008Z Brassica rapa HOM05D000329 ORTHO05D002132 2.2e-12 75.5 67 53.7
TAR371G0021 Trochodendron aralioides HOM05D000329 ORTHO05D002132 2.9e-12 75.1 76 51.3
vmacro16699 Vaccinium macrocarpon HOM05D000329 ORTHO05D002132 2.9e-12 75.1 67 56.7
CSS0040707 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002132 3.8e-12 74.7 67 56.7
Medtr3g075210 Medicago truncatula HOM05D000329 ORTHO05D002132 3.8e-12 74.7 71 56.3
EL10Ac7g18056 Beta vulgaris HOM05D000329 ORTHO05D002132 4.9e-12 74.3 74 51.4
PGR044G2583 Punica granatum HOM05D000329 ORTHO05D002132 4.9e-12 74.3 67 55.2
Sp5g13610 Schrenkiella parvula HOM05D000329 ORTHO05D002132 4.9e-12 74.3 76 52.6
CARHR157190 Cardamine hirsuta HOM05D000329 ORTHO05D002132 6.4e-12 73.9 67 56.7
CDE04G2798 Ceratophyllum demersum HOM05D000329 ORTHO05D002132 8.4e-12 73.6 67 55.2
Duzib068G0269 Durio zibethinus HOM05D000329 ORTHO05D002132 8.4e-12 73.6 67 58.2
SalBow7G4806 Salvia bowleyana HOM05D000329 ORTHO05D002132 8.4e-12 73.6 66 56.1
Actinidia08850 Actinidia chinensis HOM05D000329 ORTHO05D002132 1.1e-11 73.2 74 52.7
CARHR157180 Cardamine hirsuta HOM05D000329 ORTHO05D002132 1.1e-11 73.2 67 55.2
CDE07G1171 Ceratophyllum demersum HOM05D000329 ORTHO05D002132 1.1e-11 73.2 67 55.2
AL5G27840 Arabidopsis lyrata HOM05D000329 ORTHO05D002132 1.4e-11 72.8 67 55.2
Hund18533 Selenicereus undatus HOM05D000329 ORTHO05D002132 1.4e-11 72.8 67 52.2
Lalb_Chr13g0297471 Lupinus albus HOM05D000329 ORTHO05D002132 1.9e-11 72.4 72 52.8
TPR.G38691 Trifolium pratense HOM05D000329 ORTHO05D002132 1.9e-11 72.4 72 52.8
AL5G27830 Arabidopsis lyrata HOM05D000329 ORTHO05D002132 2.4e-11 72.0 76 50.0
AT3G48430 Arabidopsis thaliana HOM05D000329 ORTHO05D002132 2.4e-11 72.0 76 50.0
BcaB02g10653 Brassica carinata HOM05D000329 ORTHO05D002132 5.4e-11 70.9 78 48.7
Psat4g065080 Pisum sativum HOM05D000329 ORTHO05D002132 5.4e-11 70.9 67 53.7
Carub.0005s1460 Capsella rubella HOM05D000329 ORTHO05D002132 9.2e-11 70.1 76 50.0
Thhalv10010068m.g Eutrema salsugineum HOM05D000329 ORTHO05D002132 9.2e-11 70.1 67 53.7
Lj4g0026894 Lotus japonicus HOM05D000329 ORTHO05D002132 9.2e-11 70.1 68 50.0
SGA_v2.0_scaffold19G08825 Striga asiatica HOM05D000329 ORTHO05D002132 9.2e-11 70.1 66 54.5
Lj1g0003307 Lotus japonicus HOM05D000329 ORTHO05D002132 1.2e-10 69.7 75 48.0
VMungo1215G0735 Vigna mungo HOM05D000329 ORTHO05D002132 1.2e-10 69.7 67 53.7
Aqoxy5G03611 Aquilegia oxysepala HOM05D000329 ORTHO05D002132 1.6e-10 69.3 67 52.2
Thhalv10010066m.g Eutrema salsugineum HOM05D000329 ORTHO05D002132 2.1e-10 68.9 67 52.2
Glyma.04G191900 Glycine max HOM05D000329 ORTHO05D002132 2.1e-10 68.9 71 50.7
Glyma.04G192000 Glycine max HOM05D000329 ORTHO05D002132 2.1e-10 68.9 71 50.7
arahy.Tifrunner.gnm1.ann1.GH32MD Arachis hypogaea HOM05D000329 ORTHO05D002132 2.7e-10 68.6 83 43.4
Lalb_Chr12g0202071 Lupinus albus HOM05D000329 ORTHO05D002132 3.5e-10 68.2 73 49.3
arahy.Tifrunner.gnm1.ann1.28MHAL Arachis hypogaea HOM05D000329 ORTHO05D002132 4.6e-10 67.8 83 43.4
CiPaw.11G013200 Carya illinoinensis HOM05D000329 ORTHO05D002132 6.0e-10 67.4 67 52.2
Ca_16098_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002132 6.0e-10 67.4 73 52.1
Ca_30073_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002132 6.0e-10 67.4 73 52.1
Glyma.06G173800 Glycine max HOM05D000329 ORTHO05D002132 6.0e-10 67.4 69 49.3
Glyma.06G174000 Glycine max HOM05D000329 ORTHO05D002132 6.0e-10 67.4 69 49.3
Phvul.003G207700 Phaseolus vulgaris HOM05D000329 ORTHO05D002132 7.8e-10 67.0 67 49.3
CiPaw.12G034600 Carya illinoinensis HOM05D000329 ORTHO05D002132 1.0e-09 66.6 67 52.2
Psat5g141200 Pisum sativum HOM05D000329 ORTHO05D002132 1.0e-09 66.6 76 48.7
ECA247G2850 Erigeron canadensis HOM05D000329 ORTHO05D002132 1.3e-09 66.2 80 48.8
QL10p005509 Quercus lobata HOM05D000329 ORTHO05D002132 1.7e-09 65.9 78 48.7
Cfa018901 Carpinus fangiana HOM05D000329 ORTHO05D002132 2.3e-09 65.5 80 47.5
VMungo1309G0990 Vigna mungo HOM05D000329 ORTHO05D002132 2.3e-09 65.5 72 50.0
Haze_07287 Corylus avellana HOM05D000329 ORTHO05D002132 3.0e-09 65.1 80 47.5
HPP92_013548 Vanilla planifolia HOM05D000329 ORTHO05D002132 1.6e-07 59.3 97 38.1
Aqoxy3G01318 Aquilegia oxysepala HOM05D000329 ORTHO05D002132 2.8e-07 58.5 68 50.0
Phvul.009G169700 Phaseolus vulgaris HOM05D000329 ORTHO05D002132 2.8e-07 58.5 74 44.6
ATR0824G004 Amborella trichopoda HOM05D000329 ORTHO05D002132 1.1e-06 56.6 76 44.7
CSS0011842 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D012722 9.0e-06 53.5 50 56.0


User provided reference genes

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