Gene: CSS0040707

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0040707
  • Transcript Identifier CSS0040707.1
  • Gene Type Coding gene
  • Location Chr2 : 92150846-92162132 : negative

Gene Family Information

  • ID HOM05D000329
  • #Genes/#Species 1418/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0040707.1

Descriptions

  • Description PREDICTED: lysine-specific demethylase REF6 [Vitis vinifera]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035067
ISO
PLAZA Integrative Orthologynegative regulation of histone acetylation AT3G48430
GO:0045815
ISO
PLAZA Integrative Orthologypositive regulation of gene expression, epigenetic Os01g0907400
GO:0040010
ISO
PLAZA Integrative Orthologypositive regulation of growth rate Os01g0907400
GO:0010182
ISO
PLAZA Integrative Orthologysugar mediated signaling pathway AT3G48430
GO:0009741
ISO
PLAZA Integrative Orthologyresponse to brassinosteroid AT3G48430
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT3G48430
GO:0009612
ISO
PLAZA Integrative Orthologyresponse to mechanical stimulus AT3G48430
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT3G48430
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT3G48430
GO:0033169
ISO
PLAZA Integrative Orthologyhistone H3-K9 demethylation AT3G48430
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway AT3G48430
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G48430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G48430
GO:0071558
ISO
PLAZA Integrative Orthologyhistone demethylase activity (H3-K27 specific) Os01g0907400

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G48430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013087 Zinc finger C2H2-type
IPR003349 JmjN domain
IPR036236 Zinc finger C2H2 superfamily
IPR003347 JmjC domain
Mapman id Description
12.3.3.8.6 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM9)