Gene: SGA_v2.0_scaffold19G08825

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold19G08825
  • Transcript Identifier SGA_v2.0_scaffold19T08825
  • Gene Type Coding gene
  • Location scaffold19 : 2114161-2120584 : negative

Gene Family Information

  • ID HOM05D000329
  • #Genes/#Species 1418/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Lysine-specific demethylase REF6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035067
ISO
PLAZA Integrative Orthologynegative regulation of histone acetylation AT3G48430
GO:0045815
ISO
PLAZA Integrative Orthologypositive regulation of gene expression, epigenetic Os01g0907400
GO:0040010
ISO
PLAZA Integrative Orthologypositive regulation of growth rate Os01g0907400
GO:0010182
ISO
PLAZA Integrative Orthologysugar mediated signaling pathway AT3G48430
GO:0009741
ISO
PLAZA Integrative Orthologyresponse to brassinosteroid AT3G48430
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT3G48430
GO:0009612
ISO
PLAZA Integrative Orthologyresponse to mechanical stimulus AT3G48430
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT3G48430
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT3G48430
GO:0033169
ISO
PLAZA Integrative Orthologyhistone H3-K9 demethylation AT3G48430
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway AT3G48430
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G48430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G48430
GO:0071558
ISO
PLAZA Integrative Orthologyhistone demethylase activity (H3-K27 specific) Os01g0907400

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G48430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003347 JmjC domain
IPR036236 Zinc finger C2H2 superfamily
IPR003349 JmjN domain
IPR013087 Zinc finger C2H2-type
Mapman id Description
12.3.3.8.6 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM9)