Gene: PGSC0003DMG400015167

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400015167
  • Transcript Identifier PGSC0003DMT400039224
  • Gene Type Coding gene
  • Location ST4.03ch03 : 51320485-51328180 : negative

Gene Family Information

  • ID HOM05D000329
  • #Genes/#Species 1418/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37460329
  • id PGSC0003DMG400015167.v4.03
  • uniprot M1B7Y2

Descriptions

  • Description Zinc finger protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033169
IEA
GOA Databasehistone H3-K9 demethylation
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering AT5G04240
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G04240
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway AT3G48430
GO:0010182
ISO
PLAZA Integrative Orthologysugar mediated signaling pathway AT3G48430
GO:0040010
ISO
PLAZA Integrative Orthologypositive regulation of growth rate Os01g0907400
GO:0048577
ISO
PLAZA Integrative Orthologynegative regulation of short-day photoperiodism, flowering AT5G04240
GO:0045815
ISO
PLAZA Integrative Orthologypositive regulation of gene expression, epigenetic Os01g0907400
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic Os03g0151300
GO:0034721
IEA
GOA Databasehistone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0010228
IEA
GOA Databasevegetative to reproductive phase transition of meristem
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0009826
IEA
GOA Databaseunidimensional cell growth
GO:0009741
IEA
GOA Databaseresponse to brassinosteroid
GO:0009612
IEA
GOA Databaseresponse to mechanical stimulus
GO:0048366
IEA
GOA Databaseleaf development
GO:0035067
IEA
GOA Databasenegative regulation of histone acetylation
GO:0006338
IBA
GOA Databasechromatin remodeling

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071558
ISO
PLAZA Integrative Orthologyhistone demethylase activity (H3-K27 specific) Os01g0907400
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G48430
GO:0032452
IBA
GOA Databasehistone demethylase activity
GO:0034647
IBA
GOA Databasehistone demethylase activity (H3-trimethyl-K4 specific)

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003349 JmjN domain
IPR013087 Zinc finger C2H2-type
IPR036236 Zinc finger C2H2 superfamily
IPR003347 JmjC domain
Mapman id Description
12.3.3.8.6 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM9)