Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 0.0e+00 1422.5 723 100.0
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 2.3e-206 723.0 724 57.9
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 2.3e-203 713.0 725 57.2
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 2.9e-193 679.5 735 55.6
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 2.1e-191 673.3 725 55.7
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 2.5e-189 666.4 712 56.2
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 4.3e-181 639.0 603 60.4
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 4.0e-179 632.5 623 58.3
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 7.6e-178 628.2 715 52.6
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 7.6e-178 628.2 720 52.2
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 4.2e-176 622.5 715 51.9
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 5.4e-176 622.1 718 51.4
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 3.5e-175 619.4 648 55.9
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 5.1e-174 615.5 714 51.7
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 6.6e-174 615.1 701 53.5
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 6.6e-174 615.1 718 51.5
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 1.1e-173 614.4 579 59.1
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 5.6e-173 612.1 474 68.8
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 9.6e-173 611.3 611 58.3
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 2.8e-172 609.8 586 59.7
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 6.2e-172 608.6 730 52.2
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 6.2e-172 608.6 655 55.0
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 1.4e-171 607.4 472 69.1
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 3.1e-171 606.3 728 50.3
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 4.0e-171 605.9 727 51.0
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 7.6e-170 601.7 581 59.2
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 9.9e-170 601.3 534 62.4
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 3.8e-169 599.4 495 66.3
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 1.1e-168 597.8 577 60.0
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 1.4e-168 597.4 577 59.6
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 4.2e-168 595.9 577 59.1
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 2.1e-167 593.6 579 59.9
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 2.5e-165 586.6 558 59.3
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 3.3e-165 586.3 626 55.6
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 7.4e-165 585.1 638 54.4
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 1.6e-164 583.9 629 54.8
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 4.8e-164 582.4 599 56.3
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 6.2e-164 582.0 707 50.2
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 6.2e-164 582.0 625 54.6
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 8.1e-164 581.6 625 54.6
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 8.1e-164 581.6 638 54.7
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 1.8e-163 580.5 554 59.6
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 4.0e-163 579.3 638 53.8
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 5.3e-163 578.9 596 56.5
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 5.3e-163 578.9 480 65.8
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 6.9e-163 578.6 481 66.3
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 9.0e-163 578.2 593 57.7
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.0e-162 577.0 628 53.7
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 2.6e-162 576.6 728 49.7
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 2.6e-162 576.6 615 55.6
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 2.6e-162 576.6 488 64.3
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.4e-162 576.2 639 53.2
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 4.5e-162 575.9 584 56.8
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 7.6e-162 575.1 580 56.2
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 2.2e-161 573.5 492 64.6
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 4.9e-161 572.4 637 53.8
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 1.1e-160 571.2 474 65.2
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 1.1e-160 571.2 631 55.2
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 7.1e-160 568.5 590 56.9
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 7.1e-160 568.5 717 50.9
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 1.2e-159 567.8 590 56.3
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 1.0e-158 564.7 653 52.4
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 6.7e-158 562.0 634 53.8
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.1e-157 561.2 647 53.6
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 7.4e-157 558.5 510 61.0
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 3.7e-156 556.2 639 53.1
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 4.8e-156 555.8 590 56.4
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 8.2e-156 555.1 493 63.1
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 3.1e-155 553.1 734 48.4
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 6.9e-155 552.0 634 51.7
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 9.0e-155 551.6 593 56.2
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 3.4e-154 549.7 638 51.4
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 4.5e-154 549.3 557 58.3
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 4.5e-154 549.3 574 56.3
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 1.0e-153 548.1 669 52.3
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 2.2e-153 547.0 637 51.0
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 2.9e-153 546.6 620 53.1
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 8.4e-153 545.0 581 55.8
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 2.5e-152 543.5 598 54.0
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 5.5e-152 542.3 475 64.6
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 1.6e-151 540.8 525 60.2
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 2.1e-151 540.4 582 55.7
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 2.1e-151 540.4 582 55.7
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 3.5e-151 539.7 653 51.8
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 1.0e-150 538.1 643 51.9
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.3e-150 537.7 484 64.0
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 5.1e-150 535.8 579 56.1
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 6.7e-150 535.4 650 52.3
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.1e-149 534.6 724 47.8
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 3.7e-148 529.6 731 46.6
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 1.9e-144 517.3 642 49.8
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 7.9e-143 511.9 751 43.9
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 7.9e-143 511.9 482 57.9
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 2.2e-140 503.8 604 51.8
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 1.1e-139 501.5 485 57.1
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 6.9e-139 498.8 434 63.1
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 2.6e-133 480.3 473 56.7
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 8.2e-132 475.3 558 52.2
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 3.1e-123 446.8 382 64.1
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 7.0e-123 445.7 732 42.6
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 2.9e-121 440.3 844 38.6
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.2e-117 428.3 762 41.1
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 3.1e-115 420.2 501 51.5
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 7.7e-114 415.6 718 41.8
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 1.6e-98 364.8 559 41.7
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 9.2e-91 339.0 478 40.8
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 1.6e-87 328.2 467 44.5
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 3.1e-78 297.4 496 40.1
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 7.8e-66 256.1 214 61.2
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.7e-57 228.4 173 66.5
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 2.7e-42 177.9 192 57.3
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 9.4e-27 126.3 253 33.2
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 6.1e-26 123.6 222 33.8
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 2.0e-21 108.6 303 31.4
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 4.5e-21 107.5 123 44.7
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 9.7e-16 89.7 268 29.5
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 1.1e-14 86.3 50 86.0
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 8.5e-12 76.6 73 58.9


User provided reference genes

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