Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016076 Daucus carota HOM05D000282 ORTHO05D013245 1.1e-65 253.1 125 100.0
DCAR_016073 Daucus carota HOM05D000282 ORTHO05D013245 2.5e-60 235.3 147 83.7
Lj9A592T68 Lonicera japonica HOM05D000282 ORTHO05D004791 5.9e-54 214.2 172 68.0
DCAR_006965 Daucus carota HOM05D000282 ORTHO05D004791 6.5e-53 210.7 167 70.1
Lsat_1_v5_gn_7_1921 Lactuca sativa HOM05D000282 ORTHO05D004791 5.5e-52 207.6 172 66.9
HanXRQChr15g0472351 Helianthus annuus HOM05D000282 ORTHO05D004791 9.4e-52 206.8 171 66.7
Lj7C504T3 Lonicera japonica HOM05D000282 ORTHO05D004791 1.2e-51 206.5 169 67.5
ECA236G0122 Erigeron canadensis HOM05D000282 ORTHO05D004791 2.1e-51 205.7 172 65.7
HanXRQChr04g0120991 Helianthus annuus HOM05D000282 ORTHO05D004791 8.0e-51 203.8 172 65.7
Lj2C48T5 Lonicera japonica HOM05D000282 ORTHO05D004791 1.2e-49 199.9 172 63.4
Ciclev10019995m.g Citrus clementina HOM05D000282 ORTHO05D004791 2.6e-49 198.7 172 64.5
Cc04_g10460 Coffea canephora HOM05D000282 ORTHO05D004791 5.7e-49 197.6 160 66.9
SGA_v2.0_scaffold48G17909 Striga asiatica HOM05D000282 ORTHO05D004791 5.7e-49 197.6 147 70.1
vmacro13149 Vaccinium macrocarpon HOM05D000282 ORTHO05D004791 1.7e-48 196.1 172 64.0
FvH4_7g15920 Fragaria vesca HOM05D000282 ORTHO05D004791 3.7e-48 194.9 172 62.8
RcHm_v2.0_Chr1g0358791 Rosa chinensis HOM05D000282 ORTHO05D004791 3.7e-48 194.9 172 62.8
Prupe.2G100900 Prunus persica HOM05D000282 ORTHO05D004791 6.3e-48 194.1 172 62.2
Sc01g0002960 Simmondsia chinensis HOM05D000282 ORTHO05D004791 6.3e-48 194.1 172 62.8
TWI81G0677 Tripterygium wilfordii HOM05D000282 ORTHO05D004791 8.2e-48 193.7 172 62.8
GSVIVG01027050001 Vitis vinifera HOM05D000282 ORTHO05D004791 8.2e-48 193.7 172 62.8
FAN06G3555 Fragaria x ananassa HOM05D000282 ORTHO05D004791 1.1e-47 193.4 170 62.9
FAN06G5129 Fragaria x ananassa HOM05D000282 ORTHO05D004791 1.1e-47 193.4 170 62.9
FAN10G2511 Fragaria x ananassa HOM05D000282 ORTHO05D004791 1.1e-47 193.4 170 62.9
FAN10G4217 Fragaria x ananassa HOM05D000282 ORTHO05D004791 1.1e-47 193.4 170 62.9
Aqoxy7G00158 Aquilegia oxysepala HOM05D000282 ORTHO05D004791 1.4e-47 193.0 171 62.6
CiPaw.01G072200 Carya illinoinensis HOM05D000282 ORTHO05D004791 1.4e-47 193.0 172 62.2
Nitab4.5_0002855g0020 Nicotiana tabacum HOM05D000282 ORTHO05D004791 1.4e-47 193.0 177 59.9
MD01G1076100 Malus domestica HOM05D000282 ORTHO05D004791 1.8e-47 192.6 170 62.9
Manes.01G249000 Manihot esculenta HOM05D000282 ORTHO05D004791 1.8e-47 192.6 170 62.9
CSS0036656 Camellia sinensis var. sinensis HOM05D000282 ORTHO05D004791 2.4e-47 192.2 172 62.2
Rhsim07G0006700 Rhododendron simsii HOM05D000282 ORTHO05D004791 3.1e-47 191.8 172 62.2
SalBow3G2106 Salvia bowleyana HOM05D000282 ORTHO05D004791 3.1e-47 191.8 172 61.6
Actinidia10105 Actinidia chinensis HOM05D000282 ORTHO05D004791 4.1e-47 191.4 172 62.2
CSS0024011 Camellia sinensis var. sinensis HOM05D000282 ORTHO05D004791 4.1e-47 191.4 172 61.6
Prupe.1G559600 Prunus persica HOM05D000282 ORTHO05D004791 4.1e-47 191.4 172 62.8
vmacro13193 Vaccinium macrocarpon HOM05D000282 ORTHO05D004791 4.1e-47 191.4 167 64.1
Prupe.8G052800 Prunus persica HOM05D000282 ORTHO05D004791 5.3e-47 191.0 172 62.2
QL04p058632 Quercus lobata HOM05D000282 ORTHO05D004791 5.3e-47 191.0 168 63.1
QL04p059427 Quercus lobata HOM05D000282 ORTHO05D004791 5.3e-47 191.0 168 63.1
Cpa.g.sc194.8 Carica papaya HOM05D000282 ORTHO05D004791 7.0e-47 190.7 172 61.6
COL.COLO4_06331 Corchorus olitorius HOM05D000282 ORTHO05D004791 7.0e-47 190.7 172 61.6
Peaxi162Scf00089g00639 Petunia axillaris HOM05D000282 ORTHO05D004791 7.0e-47 190.7 160 65.0
Potri.014G094900 Populus trichocarpa HOM05D000282 ORTHO05D004791 7.0e-47 190.7 172 62.2
Cfa003833 Carpinus fangiana HOM05D000282 ORTHO05D004791 9.1e-47 190.3 172 61.6
Haze_15621 Corylus avellana HOM05D000282 ORTHO05D004791 9.1e-47 190.3 172 61.6
Duzib133G0471 Durio zibethinus HOM05D000282 ORTHO05D004791 9.1e-47 190.3 172 61.6
Duzib138G0443 Durio zibethinus HOM05D000282 ORTHO05D004791 9.1e-47 190.3 172 61.6
Nitab4.5_0004750g0010 Nicotiana tabacum HOM05D000282 ORTHO05D004791 9.1e-47 190.3 176 60.8
AUR62004452 Chenopodium quinoa HOM05D000282 ORTHO05D004791 1.2e-46 189.9 172 61.0
AUR62023497 Chenopodium quinoa HOM05D000282 ORTHO05D004791 1.2e-46 189.9 172 61.0
Hma1.2p1_0077F.1_g039810 Hydrangea macrophylla HOM05D000282 ORTHO05D004791 1.2e-46 189.9 172 61.0
MD07G1145100 Malus domestica HOM05D000282 ORTHO05D004791 1.2e-46 189.9 170 61.8
MELO3C006063.2 Cucumis melo HOM05D000282 ORTHO05D004791 1.6e-46 189.5 172 61.6
CsaV3_3G008430 Cucumis sativus L. HOM05D000282 ORTHO05D004791 1.6e-46 189.5 172 61.6
Eucgr.E00075 Eucalyptus grandis HOM05D000282 ORTHO05D004791 1.6e-46 189.5 173 62.4
Nn3g19105 Nelumbo nucifera HOM05D000282 ORTHO05D004791 2.7e-46 188.7 172 61.6
Sopen03g030510 Solanum pennellii HOM05D000282 ORTHO05D004791 2.7e-46 188.7 172 61.0
PGSC0003DMG400015180 Solanum tuberosum HOM05D000282 ORTHO05D004791 2.7e-46 188.7 172 61.0
Thecc.01G347400 Theobroma cacao HOM05D000282 ORTHO05D004791 2.7e-46 188.7 172 61.0
ClCG05G001100 Citrullus lanatus HOM05D000282 ORTHO05D004791 3.5e-46 188.3 172 61.0
Migut.G00954 Erythranthe guttata HOM05D000282 ORTHO05D004791 3.5e-46 188.3 165 63.6
TWI60G1292 Tripterygium wilfordii HOM05D000282 ORTHO05D004791 3.5e-46 188.3 167 62.9
TAR375G0782 Trochodendron aralioides HOM05D000282 ORTHO05D004791 3.5e-46 188.3 169 62.1
Ah.05g179880 Amaranthus hybridus HOM05D000282 ORTHO05D004791 4.5e-46 188.0 172 61.0
EL10Ac1g00313 Beta vulgaris HOM05D000282 ORTHO05D004791 4.5e-46 188.0 170 61.2
Lsat_1_v5_gn_5_84941 Lactuca sativa HOM05D000282 ORTHO05D004791 4.5e-46 188.0 167 62.3
Dinv32555 Davidia involucrata HOM05D000282 ORTHO05D004791 7.7e-46 187.2 178 59.6
Potri.002G167800 Populus trichocarpa HOM05D000282 ORTHO05D004791 7.7e-46 187.2 172 61.0
Solyc03g111380.3 Solanum lycopersicum HOM05D000282 ORTHO05D004791 1.0e-45 186.8 172 60.5
vmacro22518 Vaccinium macrocarpon HOM05D000282 ORTHO05D004791 1.0e-45 186.8 167 61.7
CAN.G352.6 Capsicum annuum HOM05D000282 ORTHO05D004791 1.3e-45 186.4 160 63.8
Sed0019380 Sechium edule HOM05D000282 ORTHO05D004791 1.3e-45 186.4 172 61.0
Hund16696 Selenicereus undatus HOM05D000282 ORTHO05D004791 1.3e-45 186.4 172 60.5
Gohir.D12G114100 Gossypium hirsutum HOM05D000282 ORTHO05D004791 1.7e-45 186.0 172 60.5
Gorai.008G123600 Gossypium raimondii HOM05D000282 ORTHO05D004791 1.7e-45 186.0 172 60.5
Hund27221 Selenicereus undatus HOM05D000282 ORTHO05D004791 1.7e-45 186.0 172 59.9
TAR636G2021 Trochodendron aralioides HOM05D000282 ORTHO05D004791 2.2e-45 185.7 172 59.9
Rhsim01G0169600 Rhododendron simsii HOM05D000282 ORTHO05D004791 3.8e-45 184.9 172 60.5
Gohir.A12G110800 Gossypium hirsutum HOM05D000282 ORTHO05D004791 5.0e-45 184.5 172 59.9
BcaC07g40674 Brassica carinata HOM05D000282 ORTHO05D004791 6.5e-45 184.1 171 59.6
A09p53710 Brassica napus HOM05D000282 ORTHO05D004791 6.5e-45 184.1 171 59.6
C08p36490 Brassica napus HOM05D000282 ORTHO05D004791 6.5e-45 184.1 171 59.6
BolC8t51232H Brassica oleracea HOM05D000282 ORTHO05D004791 6.5e-45 184.1 171 59.6
BraA09t40793Z Brassica rapa HOM05D000282 ORTHO05D004791 6.5e-45 184.1 171 59.6
Gohir.A11G094800 Gossypium hirsutum HOM05D000282 ORTHO05D004791 8.5e-45 183.7 172 61.0
Gorai.007G106000 Gossypium raimondii HOM05D000282 ORTHO05D004791 8.5e-45 183.7 172 61.0
Lj1g0019806 Lotus japonicus HOM05D000282 ORTHO05D004791 8.5e-45 183.7 172 59.3
Nitab4.5_0003282g0050 Nicotiana tabacum HOM05D000282 ORTHO05D004791 8.5e-45 183.7 166 62.0
Thhalv10005943m.g Eutrema salsugineum HOM05D000282 ORTHO05D004791 1.5e-44 183.0 172 59.9
PSO384G3855 Papaver somniferum HOM05D000282 ORTHO05D004791 1.5e-44 183.0 172 59.9
Atru.chr5.622 Acer truncatum HOM05D000282 ORTHO05D004791 1.9e-44 182.6 166 60.8
AL5G44050 Arabidopsis lyrata HOM05D000282 ORTHO05D004791 2.5e-44 182.2 172 59.3
AT3G61650 Arabidopsis thaliana HOM05D000282 ORTHO05D004791 2.5e-44 182.2 172 59.3
Carub.0005s2834 Capsella rubella HOM05D000282 ORTHO05D004791 2.5e-44 182.2 172 59.3
Gohir.D11G099800 Gossypium hirsutum HOM05D000282 ORTHO05D004791 2.5e-44 182.2 172 60.5
CARHR004860 Cardamine hirsuta HOM05D000282 ORTHO05D004791 3.2e-44 181.8 172 59.3
Aa31LG10G15630 Aethionema arabicum HOM05D000282 ORTHO05D004791 4.2e-44 181.4 172 58.7
Ca_09494_v3 Cicer arietinum L. HOM05D000282 ORTHO05D004791 4.2e-44 181.4 172 58.7
HanXRQChr17g0562591 Helianthus annuus HOM05D000282 ORTHO05D004791 4.2e-44 181.4 165 60.6
LjContig00049g0003003 Lotus japonicus HOM05D000282 ORTHO05D004791 4.2e-44 181.4 172 58.7
BcaB02g08149 Brassica carinata HOM05D000282 ORTHO05D013245 5.5e-44 181.0 169 59.8
Carub.0006s0452 Capsella rubella HOM05D000282 ORTHO05D004791 5.5e-44 181.0 172 59.3
PSO713G0028 Papaver somniferum HOM05D000282 ORTHO05D004791 5.5e-44 181.0 172 59.3
Glyma.19G253300 Glycine max HOM05D000282 ORTHO05D004791 7.2e-44 180.6 168 60.1
Nn1g01799 Nelumbo nucifera HOM05D000282 ORTHO05D004791 7.2e-44 180.6 172 58.1
TPR.G4706 Trifolium pratense HOM05D000282 ORTHO05D004791 7.2e-44 180.6 172 58.1
Sp5g01760 Schrenkiella parvula HOM05D000282 ORTHO05D004791 9.4e-44 180.3 172 58.7
AL6G15510 Arabidopsis lyrata HOM05D000282 ORTHO05D004791 1.2e-43 179.9 172 58.7
Oeu045482.2 Olea europaea HOM05D000282 ORTHO05D004791 1.6e-43 179.5 174 58.6
CDE02G4105 Ceratophyllum demersum HOM05D000282 ORTHO05D004791 2.1e-43 179.1 172 59.3
Medtr7g117050 Medicago truncatula HOM05D000282 ORTHO05D004791 2.7e-43 178.7 172 57.6
THA.LOC104817337 Tarenaya hassleriana HOM05D000282 ORTHO05D004791 2.7e-43 178.7 172 58.7
VMungo0540G0505 Vigna mungo HOM05D000282 ORTHO05D004791 2.7e-43 178.7 168 59.5
ATR0069G056 Amborella trichopoda HOM05D000282 ORTHO05D004791 3.6e-43 178.3 171 57.9
CDE09G0145 Ceratophyllum demersum HOM05D000282 ORTHO05D004791 4.7e-43 177.9 172 58.7
AT5G05620 Arabidopsis thaliana HOM05D000282 ORTHO05D004791 8.0e-43 177.2 172 57.6
Sabra14G0069500 Salix brachista HOM05D000282 ORTHO05D004791 8.0e-43 177.2 207 51.7
Glyma.03G255800 Glycine max HOM05D000282 ORTHO05D004791 1.8e-42 176.0 165 60.0
Lalb_Chr04g0261761 Lupinus albus HOM05D000282 ORTHO05D004791 2.3e-42 175.6 167 58.1
Phvul.006G110500 Phaseolus vulgaris HOM05D000282 ORTHO05D004791 6.8e-42 174.1 168 58.3
Psat3g003120 Pisum sativum HOM05D000282 ORTHO05D004791 6.8e-42 174.1 172 56.4
AagrBONN_evm.TU.Sc2ySwM_228.3904 Anthoceros agrestis HOM05D000282 ORTHO05D004791 1.5e-41 172.9 165 58.2
BcaB02g07362 Brassica carinata HOM05D000282 ORTHO05D004791 2.0e-41 172.6 172 57.0
Mapoly0046s0055 Marchantia polymorpha HOM05D000282 ORTHO05D004791 4.4e-41 171.4 165 58.8
arahy.Tifrunner.gnm1.ann1.GE9U5Y Arachis hypogaea HOM05D000282 ORTHO05D004791 2.8e-40 168.7 162 57.4
arahy.Tifrunner.gnm1.ann1.LPHW23 Arachis hypogaea HOM05D000282 ORTHO05D004791 2.8e-40 168.7 162 57.4
arahy.Tifrunner.gnm1.ann1.ZP6T3L Arachis hypogaea HOM05D000282 ORTHO05D004791 2.8e-40 168.7 162 57.4
Pp3c22_2850 Physcomitrium patens HOM05D000282 ORTHO05D004791 6.3e-40 167.5 165 58.2
arahy.Tifrunner.gnm1.ann1.7V87L9 Arachis hypogaea HOM05D000282 ORTHO05D004791 1.1e-39 166.8 137 64.2
Pp3c19_7110 Physcomitrium patens HOM05D000282 ORTHO05D004791 1.4e-39 166.4 165 57.6
ATR1100G023 Amborella trichopoda HOM05D000282 ORTHO05D004791 1.6e-38 162.9 154 60.4
Manes.05G025900 Manihot esculenta HOM05D000282 ORTHO05D004791 2.0e-38 162.5 147 61.2
PGR031G0774 Punica granatum HOM05D000282 ORTHO05D004791 2.7e-38 162.2 150 61.3
MBI07_g20449_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 5.9e-38 161.0 156 59.0
FAN01G1869 Fragaria x ananassa HOM05D000282 ORTHO05D004791 1.0e-37 160.2 129 63.6
FAN03G1170 Fragaria x ananassa HOM05D000282 ORTHO05D004791 1.0e-37 160.2 129 63.6
Zm00001eb345620 Zea mays HOM05D000282 ORTHO05D004791 1.0e-37 160.2 172 54.7
SMO118G0144 Selaginella moellendorffii HOM05D000282 ORTHO05D004791 1.3e-37 159.8 170 53.5
CiPaw.02G038600 Carya illinoinensis HOM05D000282 ORTHO05D004791 5.0e-37 157.9 149 61.1
Zm00001eb282650 Zea mays HOM05D000282 ORTHO05D004791 8.6e-37 157.1 151 58.9
Os05g0156600 Oryza sativa ssp. japonica HOM05D000282 ORTHO05D004791 3.3e-36 155.2 150 58.7
MBI07_g09923_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 1.6e-35 152.9 245 42.4
SHI16878 Sapria himalayana HOM05D000282 ORTHO05D004791 1.6e-35 152.9 149 59.7
unitig_8.g4945 Utricularia gibba HOM05D000282 ORTHO05D004791 1.0e-34 150.2 111 68.5
MBI06_g32762_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 3.4e-33 145.2 129 58.1
CBR_g39634 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-32 142.1 150 55.3
HPP92_012797 Vanilla planifolia HOM05D000282 ORTHO05D004791 4.9e-32 141.4 129 57.4
MBI19_g10806_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 9.2e-31 137.1 113 68.1
Nitab4.5_0002062g0030 Nicotiana tabacum HOM05D000282 ORTHO05D004791 1.2e-30 136.7 177 48.0
arahy.Tifrunner.gnm1.ann1.HP7BC0 Arachis hypogaea HOM05D000282 ORTHO05D004791 1.6e-30 136.3 113 65.5
MCO13G304 Micromonas commoda HOM05D000282 ORTHO05D004791 2.7e-30 135.6 158 48.7
PRCOL_00004163 Prasinoderma coloniale HOM05D000282 ORTHO05D004791 7.3e-28 127.5 151 47.0
CANSAT56G2763 Cannabis sativa HOM05D000282 ORTHO05D013245 7.5e-25 117.5 95 61.1
BcaC02g10242 Brassica carinata HOM05D000282 ORTHO05D013245 4.3e-20 101.7 99 56.6
Cre06.g299300 Chlamydomonas reinhardtii HOM05D000282 ORTHO05D004791 5.6e-20 101.3 117 49.6
Psat0s1524g0080 Pisum sativum HOM05D000282 ORTHO05D013245 2.1e-19 99.4 96 50.0
C04p31170 Brassica napus HOM05D000282 ORTHO05D013245 6.2e-19 97.8 97 55.7
MBI19_g33012_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 1.5e-17 93.2 107 56.1
Cfa025047 Carpinus fangiana HOM05D000282 ORTHO05D004791 1.3e-16 90.1 116 44.8
BolC4t24670H Brassica oleracea HOM05D000282 ORTHO05D013245 1.7e-16 89.7 94 53.2
Haze_27518 Corylus avellana HOM05D000282 ORTHO05D004791 1.2e-14 83.6 93 48.4
Lsat_1_v5_gn_8_36261 Lactuca sativa HOM05D000282 ORTHO05D230892 3.5e-14 82.0 52 78.8
Actinidia20198 Actinidia chinensis HOM05D000282 ORTHO05D004791 7.8e-14 80.9 77 63.6
Sabra02G0144000 Salix brachista HOM05D000282 ORTHO05D004791 1.6e-11 73.2 74 60.8
A04p00980 Brassica napus HOM05D000282 ORTHO05D013245 2.1e-11 72.8 93 47.3
MBI15_g37228_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 2.8e-11 72.4 73 60.3
Lj4A906T36 Lonicera japonica HOM05D000282 ORTHO05D013245 3.6e-11 72.0 41 70.7
Zm00001eb265950 Zea mays HOM05D000282 ORTHO05D004791 3.6e-11 72.0 72 61.1
CANSAT56G4294 Cannabis sativa HOM05D000282 ORTHO05D004791 4.7e-11 71.6 72 61.1
Dinv09393 Davidia involucrata HOM05D000282 ORTHO05D004791 4.1e-07 58.5 32 93.8
Zm00001eb218240 Zea mays HOM05D000282 ORTHO05D013245 4.1e-07 58.5 32 93.8
QL10p037139 Quercus lobata HOM05D000282 ORTHO05D004791 9.2e-07 57.4 32 90.6
Lsat_1_v5_gn_2_21221 Lactuca sativa HOM05D000282 ORTHO05D013245 1.2e-06 57.0 32 90.6
Lsat_1_v5_gn_4_38081 Lactuca sativa HOM05D000282 ORTHO05D013245 1.2e-06 57.0 32 90.6
HPP92_012678 Vanilla planifolia HOM05D000282 ORTHO05D004791 1.2e-06 57.0 32 90.6


User provided reference genes

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