Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc80.16 Carica papaya HOM05D001613 ORTHO05D001556 2.6e-45 185.3 111 100.0
Duzib268G1455 Durio zibethinus HOM05D001613 ORTHO05D001556 1.1e-32 143.3 86 76.7
Thecc.07G100200 Theobroma cacao HOM05D001613 ORTHO05D001556 2.5e-32 142.1 86 77.9
QL08p023274 Quercus lobata HOM05D001613 ORTHO05D001556 9.6e-32 140.2 86 79.1
Gohir.D13G152290 Gossypium hirsutum HOM05D001613 ORTHO05D001556 1.3e-31 139.8 86 73.3
Lj3g0003713 Lotus japonicus HOM05D001613 ORTHO05D001556 1.3e-31 139.8 86 76.7
CiPaw.12G116600 Carya illinoinensis HOM05D001613 ORTHO05D001556 2.1e-31 139.0 83 79.5
Gohir.A13G147500 Gossypium hirsutum HOM05D001613 ORTHO05D001556 3.7e-31 138.3 86 72.1
Gorai.013G172000 Gossypium raimondii HOM05D001613 ORTHO05D001556 3.7e-31 138.3 86 72.1
CANSAT35G1755 Cannabis sativa HOM05D001613 ORTHO05D001556 6.2e-31 137.5 86 75.6
QL01p024800 Quercus lobata HOM05D001613 ORTHO05D000231 8.1e-31 137.1 86 77.9
CiPaw.11G166200 Carya illinoinensis HOM05D001613 ORTHO05D001556 3.1e-30 135.2 86 75.6
Duzib213G0605 Durio zibethinus HOM05D001613 ORTHO05D001556 6.9e-30 134.0 86 70.9
Prupe.4G172900 Prunus persica HOM05D001613 ORTHO05D001556 1.2e-29 133.3 82 79.3
QL93p1902_0605 Quercus lobata HOM05D002936 ORTHO05D003306 2.0e-29 132.5 109 61.5
Glyma.12G158000 Glycine max HOM05D001613 ORTHO05D001556 2.6e-29 132.1 84 76.2
Glyma.06G235200 Glycine max HOM05D001613 ORTHO05D001556 3.4e-29 131.7 84 75.0
Gohir.D01G046500 Gossypium hirsutum HOM05D001613 ORTHO05D001556 4.5e-29 131.3 86 72.1
Gorai.002G065900 Gossypium raimondii HOM05D001613 ORTHO05D001556 4.5e-29 131.3 86 72.1
Lj3g0020932 Lotus japonicus HOM05D001613 ORTHO05D001556 4.5e-29 131.3 86 70.9
arahy.Tifrunner.gnm1.ann1.5XLE41 Arachis hypogaea HOM05D001613 ORTHO05D001556 1.3e-28 129.8 82 73.2
arahy.Tifrunner.gnm1.ann1.GD4ZSB Arachis hypogaea HOM05D001613 ORTHO05D001556 1.3e-28 129.8 82 73.2
VMungo1127G0489 Vigna mungo HOM05D001613 ORTHO05D001556 1.3e-28 129.8 82 74.4
Ciclev10008640m.g Citrus clementina HOM05D001613 ORTHO05D001556 1.7e-28 129.4 86 72.1
Phvul.011G158200 Phaseolus vulgaris HOM05D001613 ORTHO05D001556 2.2e-28 129.0 82 73.2
TWI38G0128 Tripterygium wilfordii HOM05D001613 ORTHO05D001556 2.2e-28 129.0 86 70.9
THA.LOC104815564 Tarenaya hassleriana HOM05D001613 ORTHO05D001556 4.9e-28 127.9 106 61.3
Carub.0003s1816 Capsella rubella HOM05D001613 ORTHO05D001556 6.4e-28 127.5 106 63.2
Ca_24304_v3 Cicer arietinum L. HOM05D001613 ORTHO05D001556 6.4e-28 127.5 82 70.7
Potri.001G373300 Populus trichocarpa HOM05D001613 ORTHO05D001556 6.4e-28 127.5 86 68.6
GSVIVG01014258001 Vitis vinifera HOM05D001613 ORTHO05D001556 1.1e-27 126.7 82 72.0
Manes.13G085400 Manihot esculenta HOM05D001613 ORTHO05D001556 1.4e-27 126.3 86 69.8
Aa31LG8G5210 Aethionema arabicum HOM05D001613 ORTHO05D001556 1.9e-27 125.9 85 71.8
Actinidia35234 Actinidia chinensis HOM05D004118 ORTHO05D001556 2.4e-27 125.6 82 72.0
AL3G31670 Arabidopsis lyrata HOM05D001613 ORTHO05D001556 2.4e-27 125.6 109 60.6
SHI21502 Sapria himalayana HOM05D001613 ORTHO05D001556 2.4e-27 125.6 84 67.9
Gohir.A01G060000 Gossypium hirsutum HOM05D001613 ORTHO05D001556 3.2e-27 125.2 91 68.1
PGR083G0022 Punica granatum HOM05D001613 ORTHO05D001556 4.2e-27 124.8 86 67.4
Sabra16G0245700 Salix brachista HOM05D001613 ORTHO05D001556 7.1e-27 124.0 86 65.1
ClCG05G009190 Citrullus lanatus HOM05D001613 ORTHO05D001556 9.3e-27 123.6 85 70.6
MD11G1257200 Malus domestica HOM05D001613 ORTHO05D001556 9.3e-27 123.6 82 72.0
Potri.011G097500 Populus trichocarpa HOM05D001613 ORTHO05D001556 9.3e-27 123.6 86 67.4
CsaV3_3G019600 Cucumis sativus L. HOM05D001613 ORTHO05D001556 1.2e-26 123.2 85 70.6
Dinv20218 Davidia involucrata HOM05D001613 ORTHO05D001556 1.6e-26 122.9 82 67.1
THA.LOC104810452 Tarenaya hassleriana HOM05D001613 ORTHO05D001556 1.6e-26 122.9 84 71.4
Lsat_1_v5_gn_5_128760 Lactuca sativa HOM05D001613 ORTHO05D001556 2.1e-26 122.5 82 68.3
Lalb_Chr19g0134021 Lupinus albus HOM05D001613 ORTHO05D001556 2.1e-26 122.5 86 66.3
Medtr8g061040 Medicago truncatula HOM05D001613 ORTHO05D001556 2.1e-26 122.5 83 71.1
AT3G18380 Arabidopsis thaliana HOM05D001613 ORTHO05D001556 3.5e-26 121.7 85 70.6
MELO3C019390.2 Cucumis melo HOM05D001613 ORTHO05D001556 3.5e-26 121.7 85 69.4
Dinv14951 Davidia involucrata HOM05D001613 ORTHO05D001556 3.5e-26 121.7 82 64.6
Lalb_Chr25g0286161 Lupinus albus HOM05D001613 ORTHO05D001556 4.6e-26 121.3 80 72.5
MD03G1236400 Malus domestica HOM05D001613 ORTHO05D001556 4.6e-26 121.3 82 69.5
FvH4_3g19120 Fragaria vesca HOM05D001613 ORTHO05D001556 6.0e-26 120.9 82 70.7
FAN11G2345 Fragaria x ananassa HOM05D001613 ORTHO05D001556 6.0e-26 120.9 82 70.7
FAN25G2522 Fragaria x ananassa HOM05D001613 ORTHO05D001556 6.0e-26 120.9 82 70.7
Psat2g083920 Pisum sativum HOM05D001613 ORTHO05D001556 7.9e-26 120.6 83 69.9
FAN16G1152 Fragaria x ananassa HOM05D001613 ORTHO05D001556 1.0e-25 120.2 82 70.7
Lalb_Chr03g0030821 Lupinus albus HOM05D001613 ORTHO05D001556 1.0e-25 120.2 81 69.1
TWI39G0917 Tripterygium wilfordii HOM05D001613 ORTHO05D001556 1.0e-25 120.2 86 67.4
CARHR093730 Cardamine hirsuta HOM05D001613 ORTHO05D001556 1.8e-25 119.4 88 65.9
Sabra11G0090400 Salix brachista HOM05D001613 ORTHO05D001556 1.8e-25 119.4 86 67.4
Sabra11G0091600 Salix brachista HOM05D001613 ORTHO05D001556 1.8e-25 119.4 86 67.4
RcHm_v2.0_Chr5g0031921 Rosa chinensis HOM05D001613 ORTHO05D001556 2.3e-25 119.0 83 72.3
Eucgr.F01181 Eucalyptus grandis HOM05D001613 ORTHO05D001556 3.0e-25 118.6 86 66.3
Sp3g16490 Schrenkiella parvula HOM05D001613 ORTHO05D001556 5.1e-25 117.9 85 69.4
TPR.G28171 Trifolium pratense HOM05D001613 ORTHO05D001556 6.7e-25 117.5 83 68.7
CSS0017563 Camellia sinensis var. sinensis HOM05D001613 ORTHO05D001556 8.7e-25 117.1 82 65.9
CSS0040689 Camellia sinensis var. sinensis HOM05D001613 ORTHO05D001556 8.7e-25 117.1 82 65.9
BcaB06g25884 Brassica carinata HOM05D001613 ORTHO05D001556 1.5e-24 116.3 85 69.4
Nn1g09301 Nelumbo nucifera HOM05D001613 ORTHO05D001556 1.5e-24 116.3 84 67.9
Nitab4.5_0005232g0050 Nicotiana tabacum HOM05D001613 ORTHO05D001556 1.9e-24 115.9 78 67.9
Thhalv10021077m.g Eutrema salsugineum HOM05D001613 ORTHO05D001556 7.4e-24 114.0 109 57.8
Sed0014113 Sechium edule HOM05D001613 ORTHO05D001556 7.4e-24 114.0 67 79.1
A01p35970 Brassica napus HOM05D001613 ORTHO05D001556 1.3e-23 113.2 85 63.5
BraA01t03678Z Brassica rapa HOM05D001613 ORTHO05D001556 1.3e-23 113.2 85 63.5
Sed0003169 Sechium edule HOM05D001613 ORTHO05D001556 1.3e-23 113.2 87 64.4
BcaC09g48795 Brassica carinata HOM05D001613 ORTHO05D001556 3.7e-23 111.7 75 68.0
C01p45840 Brassica napus HOM05D001613 ORTHO05D001556 3.7e-23 111.7 75 68.0
BolC1t04546H Brassica oleracea HOM05D001613 ORTHO05D001556 3.7e-23 111.7 75 68.0
Cc05_g11560 Coffea canephora HOM05D001613 ORTHO05D001556 3.7e-23 111.7 83 63.9
TAR375G0357 Trochodendron aralioides HOM05D001613 ORTHO05D001556 3.7e-23 111.7 80 67.5
vmacro09513 Vaccinium macrocarpon HOM05D001613 ORTHO05D001556 4.8e-23 111.3 82 61.0
Rhsim04G0023300 Rhododendron simsii HOM05D001613 ORTHO05D001556 6.2e-23 110.9 82 63.4
vmacro11901 Vaccinium macrocarpon HOM05D001613 ORTHO05D001556 6.2e-23 110.9 89 62.9
BraA05t21967Z Brassica rapa HOM05D001613 ORTHO05D001556 8.2e-23 110.5 68 76.5
SalBow7G4060 Salvia bowleyana HOM05D001613 ORTHO05D001556 8.2e-23 110.5 84 61.9
BcaB04g20763 Brassica carinata HOM05D001613 ORTHO05D001556 1.1e-22 110.2 85 62.4
BcaC05g28633 Brassica carinata HOM05D001613 ORTHO05D001556 2.4e-22 109.0 68 75.0
A05p31300 Brassica napus HOM05D001613 ORTHO05D001556 2.4e-22 109.0 68 75.0
BolC5t33464H Brassica oleracea HOM05D001613 ORTHO05D001556 2.4e-22 109.0 68 75.0
HanXRQChr10g0302441 Helianthus annuus HOM05D001613 ORTHO05D001556 2.4e-22 109.0 82 64.6
C05p47380 Brassica napus HOM05D001613 ORTHO05D001556 3.1e-22 108.6 68 75.0
Hma1.2p1_0313F.1_g121610 Hydrangea macrophylla HOM05D001613 ORTHO05D001556 3.1e-22 108.6 83 62.7
Hund22809 Selenicereus undatus HOM05D001613 ORTHO05D001556 3.1e-22 108.6 81 60.5
arahy.Tifrunner.gnm1.ann1.LNW2E9 Arachis hypogaea HOM05D001613 ORTHO05D001556 9.0e-22 107.1 86 58.1
Peaxi162Scf00027g00138 Petunia axillaris HOM05D001613 ORTHO05D001556 9.0e-22 107.1 77 63.6
Migut.M00766 Erythranthe guttata HOM05D001613 ORTHO05D001556 2.0e-21 105.9 87 60.9
MBI04_g30809_MAGBIO Magnolia biondii HOM05D001613 ORTHO05D001556 2.0e-21 105.9 81 65.4
Nitab4.5_0001208g0100 Nicotiana tabacum HOM05D001613 ORTHO05D001556 4.5e-21 104.8 88 59.1
PSO513G0172 Papaver somniferum HOM05D001613 ORTHO05D001556 4.5e-21 104.8 80 58.8
Solyc10g007130.4 Solanum lycopersicum HOM05D001613 ORTHO05D001556 7.6e-21 104.0 77 62.3
Sopen10g003030 Solanum pennellii HOM05D001613 ORTHO05D001556 7.6e-21 104.0 77 62.3
MSTRG.12888 Avicennia marina HOM05D001613 ORTHO05D001556 1.0e-20 103.6 84 58.3
Oeu051096.2 Olea europaea HOM05D001613 ORTHO05D001556 1.3e-20 103.2 84 60.7
PSO339G6325 Papaver somniferum HOM05D001613 ORTHO05D001556 1.3e-20 103.2 80 57.5
ECA234G4269 Erigeron canadensis HOM05D001613 ORTHO05D006883 2.9e-20 102.1 81 63.0
TAR629G0933 Trochodendron aralioides HOM05D001613 ORTHO05D001556 4.9e-20 101.3 80 61.2
arahy.Tifrunner.gnm1.ann1.NJK3G3 Arachis hypogaea HOM05D001613 ORTHO05D001556 6.5e-20 100.9 87 56.3
AUR62019504 Chenopodium quinoa HOM05D001613 ORTHO05D001556 1.4e-19 99.8 81 55.6
AUR62036133 Chenopodium quinoa HOM05D001613 ORTHO05D001556 1.4e-19 99.8 81 55.6
CSS0038520 Camellia sinensis var. sinensis HOM05D001613 ORTHO05D001556 1.9e-19 99.4 82 59.8
Aqoxy3G01822 Aquilegia oxysepala HOM05D001613 ORTHO05D001556 7.1e-19 97.4 89 57.3
CAN.G1119.16 Capsicum annuum HOM05D001613 ORTHO05D001556 7.1e-19 97.4 78 59.0
Atru.chr2.2378 Acer truncatum HOM05D001613 ORTHO05D001556 9.3e-19 97.1 58 77.6
SEGI_20314 Sequoiadendron giganteum HOM05D001613 ORTHO05D001556 1.2e-18 96.7 73 63.0
CDE02G2913 Ceratophyllum demersum HOM05D001613 ORTHO05D001556 2.1e-18 95.9 73 61.6
DCAR_013130 Daucus carota HOM05D001613 ORTHO05D001556 2.7e-18 95.5 82 54.9
Ah.04g164450 Amaranthus hybridus HOM05D001613 ORTHO05D001556 4.6e-18 94.7 80 52.5
ATR0568G135 Amborella trichopoda HOM05D001613 ORTHO05D001556 7.9e-18 94.0 73 58.9
Rhsim06G0203700 Rhododendron simsii HOM05D001613 ORTHO05D001556 7.9e-18 94.0 58 74.1
Oeu061323.1 Olea europaea HOM05D001613 ORTHO05D001556 1.3e-17 93.2 84 57.1
DCAR_019583 Daucus carota HOM05D001613 ORTHO05D001556 8.7e-17 90.5 82 54.9
EL10Ac4g08278 Beta vulgaris HOM05D001613 ORTHO05D001556 4.3e-16 88.2 73 54.8
EL10Ac8g19616 Beta vulgaris HOM05D001613 ORTHO05D001556 4.3e-16 88.2 73 54.8
SGA_v2.0_scaffold70G23699 Striga asiatica HOM05D001613 ORTHO05D001556 3.7e-15 85.1 60 66.7
CDE06G0377 Ceratophyllum demersum HOM05D001613 ORTHO05D001556 6.3e-15 84.3 71 60.6
SEGI_38066 Sequoiadendron giganteum HOM05D001613 ORTHO05D001556 1.4e-14 83.2 73 52.1
Ah.06g184930 Amaranthus hybridus HOM05D001613 ORTHO05D001556 2.6e-13 79.0 86 44.2
PSO782G4177 Papaver somniferum HOM05D001613 ORTHO05D001556 7.6e-13 77.4 81 48.1
HPP92_003627 Vanilla planifolia HOM05D001613 ORTHO05D001556 1.0e-12 77.0 87 51.7
Zm00001eb097990 Zea mays HOM05D001613 ORTHO05D001556 1.0e-12 77.0 71 54.9
PSO063G4821 Papaver somniferum HOM05D001613 ORTHO05D001556 1.3e-12 76.6 81 48.1
Haze_09377 Corylus avellana HOM05D001613 ORTHO05D001556 2.2e-12 75.9 45 77.8
Zm00001eb309600 Zea mays HOM05D001613 ORTHO05D001556 2.9e-12 75.5 71 53.5
Actinidia14385 Actinidia chinensis HOM05D001613 ORTHO05D001556 5.0e-12 74.7 58 58.6
SGA_v2.0_scaffold73G24220 Striga asiatica HOM05D001613 ORTHO05D001556 1.1e-11 73.6 82 47.6
PSO151G0179 Papaver somniferum HOM05D001613 ORTHO05D001556 7.2e-11 70.9 81 44.4
Mapoly0006s0154 Marchantia polymorpha HOM05D001613 ORTHO05D001556 3.6e-10 68.6 74 40.5
Pp3c20_17640 Physcomitrium patens HOM05D001613 ORTHO05D001556 4.6e-10 68.2 62 51.6
FAN21G1640 Fragaria x ananassa HOM05D001613 ORTHO05D001556 5.1e-09 64.7 82 46.3
PSO339G6397 Papaver somniferum HOM05D001613 ORTHO05D001556 8.8e-09 63.9 83 42.2
AagrBONN_evm.TU.Sc2ySwM_228.3854 Anthoceros agrestis HOM05D001613 ORTHO05D001556 3.3e-08 62.0 61 49.2
Aqoxy1G03884 Aquilegia oxysepala HOM05D000218 ORTHO05D000125 3.3e-08 62.0 74 48.6
AagrBONN_evm.TU.Sc2ySwM_228.2783 Anthoceros agrestis HOM05D001613 ORTHO05D001556 6.9e-06 54.3 74 37.8


User provided reference genes

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