Gene: Solyc10g007130.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g007130.4
  • Transcript Identifier Solyc10g007130.4.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 1410254-1418470 : negative

Gene Family Information

  • ID HOM05D001613
  • #Genes/#Species 400/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g007130.4.1
  • uniprot A0A3Q7J625
  • gene_id Solyc10g007130

Descriptions

  • Description protein SAWADEE HOMEODOMAIN HOMOLOG 2-like (AHRD V3.3 *** A0A2I4H1W3_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003682
IEA
GOA Databasechromatin binding
GO:0003682
IEA
InterProchromatin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
IPR032001 SAWADEE domain
IPR039276 Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2
Mapman id Description
12.5.1.7 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-IV-positioning factor (SHH)