Gene: Sopen10g003030

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g003030
  • Transcript Identifier Sopen10g003030.2
  • Gene Type Coding gene
  • Location Spenn-ch10 : 1589496-1597731 : negative

Gene Family Information

  • ID HOM05D001613
  • #Genes/#Species 400/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g003030.2

Descriptions

  • Description sequence-specific DNA binding transcription factors, sequence-specific DNA binding | FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Homeobox | BEST Arabidopsis thaliana protein match is: unknown protein .
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003682
IEA
InterProchromatin binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039276 Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2
IPR001356 Homeobox domain
IPR032001 SAWADEE domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
12.5.1.7 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-IV-positioning factor (SHH)