Gene: Zm00001eb309600

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb309600
  • Transcript Identifier Zm00001eb309600_T001
  • Gene Type Coding gene
  • Location 7 : 89965329-89981520 : negative

Gene Family Information

  • ID HOM05D001613
  • #Genes/#Species 400/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb309600_T001
  • pid Zm00001eb309600_P001
  • uniprot A0A1D6I1T7
  • uniprot A0A3L6DYB0
  • uniprot A0A1D6I1S7
  • uniprot B7ZYW3
  • uniprot A0A1D6I1S8
  • uniprot B4FT43
  • uniprot B4FI09
  • uniprot A0A1D6I1T5
  • entrez 100273133
  • refseq NM_001147580.1
  • refseq NP_001141052.1
  • V4_identifier Zm00001d020046

Descriptions

  • Description Zm00001e033791
  • Description HB transcription factor
  • Description Protein SAWADEE HOMEODOMAIN HOMOLOG 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT1G15215
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT1G15215
GO:0006346
ISO
PLAZA Integrative OrthologyDNA methylation-dependent heterochromatin assembly AT1G15215

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003682
IEA
GOA Databasechromatin binding
GO:0003682
IEA
InterProchromatin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039276 Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2
IPR032001 SAWADEE domain
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
12.5.1.7 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-IV-positioning factor (SHH)