Gene: Zm00001eb097990

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb097990
  • Transcript Identifier Zm00001eb097990_T001
  • Gene Type Coding gene
  • Location 2 : 179196350-179202163 : negative

Gene Family Information

  • ID HOM05D001613
  • #Genes/#Species 400/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb097990_T001
  • pid Zm00001eb097990_P001
  • uniprot A0A1D6EP14
  • uniprot A0A1D6EP12
  • uniprot A0A1D6EP16
  • uniprot A0A1D6EP15
  • uniprot B7ZYP9
  • uniprot A0A3L6FVR9
  • uniprot A0A1D6EP19
  • entrez 100279552
  • refseq NP_001146021.1
  • refseq NM_001152549.1
  • V4_identifier Zm00001d005584

Descriptions

  • Description Zm00001e009676
  • Description Protein SAWADEE HOMEODOMAIN HOMOLOG 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT1G15215
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT1G15215
GO:0006346
ISO
PLAZA Integrative OrthologyDNA methylation-dependent heterochromatin assembly AT1G15215

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003682
IEA
GOA Databasechromatin binding
GO:0003682
IEA
InterProchromatin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
IPR032001 SAWADEE domain
IPR039276 Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2
Mapman id Description
12.5.1.7 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-IV-positioning factor (SHH)