Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc46.114 Carica papaya HOM05D007201 ORTHO05D009122 6.1e-226 787.3 452 100.0
Gorai.012G009900 Gossypium raimondii HOM05D007201 ORTHO05D009122 1.6e-80 304.3 426 49.3
Atru.chr7.298 Acer truncatum HOM05D007201 ORTHO05D009122 7.8e-80 302.0 419 45.6
Thecc.09G202300 Theobroma cacao HOM05D007201 ORTHO05D009122 7.8e-80 302.0 424 48.1
Gohir.D04G008200 Gossypium hirsutum HOM05D007201 ORTHO05D009122 1.5e-78 297.7 415 50.1
Manes.02G222200 Manihot esculenta HOM05D007201 ORTHO05D009122 6.2e-77 292.4 419 45.3
Ciclev10008517m.g Citrus clementina HOM05D007201 ORTHO05D009122 3.4e-75 286.6 414 44.2
Rhsim03G0269700 Rhododendron simsii HOM05D007201 ORTHO05D009122 5.8e-75 285.8 416 48.3
TAR626G0209 Trochodendron aralioides HOM05D007201 ORTHO05D009122 9.8e-75 285.0 425 43.8
Actinidia03796 Actinidia chinensis HOM05D007201 ORTHO05D009122 1.1e-73 281.6 425 47.1
Potri.006G081100 Populus trichocarpa HOM05D007201 ORTHO05D009122 7.0e-73 278.9 462 44.4
COL.COLO4_09000 Corchorus olitorius HOM05D007201 ORTHO05D009122 2.7e-72 276.9 433 45.7
CSS0027843 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 3.5e-72 276.6 422 45.7
Haze_21242 Corylus avellana HOM05D007201 ORTHO05D009122 8.1e-69 265.4 426 44.1
Prupe.1G000600 Prunus persica HOM05D007201 ORTHO05D009122 3.1e-68 263.5 423 44.2
Cfa012872 Carpinus fangiana HOM05D007201 ORTHO05D009122 4.4e-67 259.6 429 43.6
Glyma.12G016400 Glycine max HOM05D007201 ORTHO05D009122 2.2e-66 257.3 404 50.7
CiPaw.15G000100 Carya illinoinensis HOM05D007201 ORTHO05D009122 2.9e-66 256.9 423 48.5
RcHm_v2.0_Chr4g0384751 Rosa chinensis HOM05D007201 ORTHO05D009122 2.9e-66 256.9 432 40.7
MD04G1000600 Malus domestica HOM05D007201 ORTHO05D009122 3.7e-66 256.5 422 45.7
Sabra06G0061200 Salix brachista HOM05D007201 ORTHO05D009122 6.4e-66 255.8 479 40.9
Lju50A20G7 Lonicera japonica HOM05D007201 ORTHO05D009122 1.1e-65 255.0 442 44.3
Sc10g0006090 Simmondsia chinensis HOM05D007201 ORTHO05D009122 2.4e-65 253.8 415 42.4
Lj3g0009807 Lotus japonicus HOM05D007201 ORTHO05D009122 6.0e-64 249.2 409 48.7
GSVIVG01034266001 Vitis vinifera HOM05D007201 ORTHO05D009122 7.8e-64 248.8 438 43.4
Phvul.011G018600 Phaseolus vulgaris HOM05D007201 ORTHO05D009122 1.0e-63 248.4 404 43.3
FAN12G0236 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.7e-63 247.7 425 40.5
Eucgr.C00055 Eucalyptus grandis HOM05D007201 ORTHO05D009122 2.3e-63 247.3 405 48.6
VMungo1127G0228 Vigna mungo HOM05D007201 ORTHO05D009122 2.3e-63 247.3 403 45.9
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 3.9e-63 246.5 428 42.3
arahy.Tifrunner.gnm1.ann1.G7GJBK Arachis hypogaea HOM05D007201 ORTHO05D009122 5.1e-63 246.1 416 46.6
THA.LOC104809224 Tarenaya hassleriana HOM05D007201 ORTHO05D009122 1.1e-62 245.0 436 42.0
Glyma.11G109000 Glycine max HOM05D007201 ORTHO05D009122 4.3e-62 243.0 408 47.3
arahy.Tifrunner.gnm1.ann1.X4HTYC Arachis hypogaea HOM05D007201 ORTHO05D009122 7.3e-62 242.3 422 46.7
QL11p005700 Quercus lobata HOM05D007201 ORTHO05D009122 9.5e-62 241.9 437 39.1
FvH4_4g00131 Fragaria vesca HOM05D007201 ORTHO05D009122 1.2e-61 241.5 437 39.4
Nn8g41282 Nelumbo nucifera HOM05D007201 ORTHO05D009122 2.8e-61 240.4 404 44.8
MELO3C010035.2 Cucumis melo HOM05D007201 ORTHO05D009122 4.7e-61 239.6 429 38.5
HanXRQChr10g0309261 Helianthus annuus HOM05D007201 ORTHO05D009122 2.4e-60 237.3 274 54.0
Cc06_g23490 Coffea canephora HOM05D007201 ORTHO05D009122 2.6e-59 233.8 449 41.6
Hund22525 Selenicereus undatus HOM05D007201 ORTHO05D009122 1.7e-58 231.1 419 40.8
SHI24431 Sapria himalayana HOM05D007201 ORTHO05D009122 1.1e-57 228.4 272 51.5
CsaV3_1G044360 Cucumis sativus L. HOM05D007201 ORTHO05D009122 1.9e-57 227.6 407 38.6
PGR142G4385 Punica granatum HOM05D007201 ORTHO05D009122 2.4e-57 227.3 428 39.5
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.2e-56 224.9 429 39.9
Psat7g169960 Pisum sativum HOM05D007201 ORTHO05D009122 2.1e-56 224.2 437 38.2
Lsat_1_v5_gn_5_80700 Lactuca sativa HOM05D007201 ORTHO05D009122 1.3e-55 221.5 411 37.7
PSO339G5324 Papaver somniferum HOM05D007201 ORTHO05D009122 2.3e-55 220.7 421 42.8
PGSC0003DMG400002893 Solanum tuberosum HOM05D007201 ORTHO05D009122 1.1e-54 218.4 459 38.6
Carub.0002s2218 Capsella rubella HOM05D007201 ORTHO05D009122 1.5e-54 218.0 417 42.0
ECA234G1264 Erigeron canadensis HOM05D007201 ORTHO05D009122 2.5e-54 217.2 414 38.4
Peaxi162Scf00047g02450 Petunia axillaris HOM05D007201 ORTHO05D009122 9.6e-54 215.3 404 41.8
TPR.G28027 Trifolium pratense HOM05D007201 ORTHO05D009122 9.6e-54 215.3 461 37.3
Solyc12g009390.2 Solanum lycopersicum HOM05D007201 ORTHO05D009122 1.3e-53 214.9 249 51.4
vmacro22702 Vaccinium macrocarpon HOM05D007201 ORTHO05D009122 2.4e-52 210.7 518 34.9
AL2G35270 Arabidopsis lyrata HOM05D007201 ORTHO05D009122 5.3e-52 209.5 276 44.2
CANSAT25G2467 Cannabis sativa HOM05D007201 ORTHO05D009122 9.0e-52 208.8 262 45.0
Thhalv10018711m.g Eutrema salsugineum HOM05D007201 ORTHO05D009122 9.0e-52 208.8 416 37.3
HPP92_017373 Vanilla planifolia HOM05D007201 ORTHO05D009122 2.6e-51 207.2 418 40.9
Sopen12g004380 Solanum pennellii HOM05D007201 ORTHO05D009122 3.4e-51 206.8 239 51.9
Aqoxy7G02518 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 9.9e-51 205.3 460 35.0
CARHR068690 Cardamine hirsuta HOM05D007201 ORTHO05D009122 9.9e-51 205.3 272 47.4
Sp5g30480 Schrenkiella parvula HOM05D007201 ORTHO05D009122 3.8e-50 203.4 269 46.1
CAN.G1591.3 Capsicum annuum HOM05D007201 ORTHO05D009122 8.4e-50 202.2 241 51.0
Lalb_Chr19g0140031 Lupinus albus HOM05D007201 ORTHO05D009122 1.9e-49 201.1 403 37.5
Aa31LG4G5550 Aethionema arabicum HOM05D007201 ORTHO05D009122 3.2e-49 200.3 289 46.7
Duzib168G1263 Durio zibethinus HOM05D007201 ORTHO05D009122 5.4e-49 199.5 437 39.8
SGA_v2.0_scaffold21G09583 Striga asiatica HOM05D007201 ORTHO05D009122 2.3e-47 194.1 471 38.6
FAN12G1512 Fragaria x ananassa HOM05D007201 ORTHO05D009122 6.6e-47 192.6 309 39.5
Aqoxy37s001 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 1.9e-46 191.0 353 37.1
CSS0037159 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.9e-46 191.0 305 41.6
Nitab4.5_0000073g0490 Nicotiana tabacum HOM05D007201 ORTHO05D009122 2.8e-45 187.2 238 48.3
AT1G75340 Arabidopsis thaliana HOM05D007201 ORTHO05D009122 3.6e-45 186.8 270 43.7
BraA07t31630Z Brassica rapa HOM05D007201 ORTHO05D009122 1.1e-44 185.3 461 34.7
Medtr4g078160 Medicago truncatula HOM05D007201 ORTHO05D009122 1.1e-44 185.3 320 41.9
Zm00001eb227240 Zea mays HOM05D007201 ORTHO05D009122 1.1e-44 185.3 420 38.1
A07p40900 Brassica napus HOM05D007201 ORTHO05D009122 1.8e-44 184.5 448 33.9
Dinv26498 Davidia involucrata HOM05D007201 ORTHO05D009122 4.0e-44 183.3 426 39.4
C06p49330 Brassica napus HOM05D007201 ORTHO05D009122 6.9e-44 182.6 450 35.3
SEGI_05170 Sequoiadendron giganteum HOM05D007201 ORTHO05D009122 1.2e-43 181.8 456 33.1
CDE04G0352 Ceratophyllum demersum HOM05D007201 ORTHO05D009122 1.5e-43 181.4 318 39.0
CSS0027553 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 7.6e-43 179.1 286 43.0
BcaC08g47362 Brassica carinata HOM05D007201 ORTHO05D009122 1.3e-42 178.3 446 33.6
FAN22G0406 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.3e-42 178.3 433 35.3
BolC6t39968H Brassica oleracea HOM05D007201 ORTHO05D009122 2.9e-42 177.2 478 33.3
EL10Ac2g03602 Beta vulgaris HOM05D007201 ORTHO05D009122 8.4e-42 175.6 484 34.7
AUR62027959 Chenopodium quinoa HOM05D007201 ORTHO05D009122 1.1e-41 175.3 223 48.0
Os06g0704300 Oryza sativa ssp. japonica HOM05D007201 ORTHO05D009122 1.4e-41 174.9 406 42.1
ATR0626G320 Amborella trichopoda HOM05D007201 ORTHO05D009122 5.1e-39 166.4 439 33.9
Nitab4.5_0004827g0030 Nicotiana tabacum HOM05D007201 ORTHO05D009122 2.6e-35 154.1 344 34.3
unitig_8.g3542 Utricularia gibba HOM05D007201 ORTHO05D009122 7.6e-35 152.5 275 38.2
Pp3c7_12210 Physcomitrium patens HOM05D007201 ORTHO05D009122 1.9e-30 137.9 283 33.2
FAN17G0247 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.6e-29 134.8 101 60.4
Mapoly0005s0044 Marchantia polymorpha HOM05D007201 ORTHO05D009122 1.6e-29 134.8 282 33.7
Oeu000954.1 Olea europaea HOM05D007201 ORTHO05D009122 1.5e-22 111.7 227 37.9
AagrBONN_evm.TU.Sc2ySwM_117.2509 Anthoceros agrestis HOM05D007201 ORTHO05D009122 1.9e-22 111.3 206 37.4
Migut.L01609 Erythranthe guttata HOM05D007201 ORTHO05D009122 9.7e-22 109.0 261 39.8
CBR_g15955 Chara braunii HOM05D007201 ORTHO05D009122 4.5e-19 100.1 167 39.5
Gohir.A05G407400 Gossypium hirsutum HOM05D007201 ORTHO05D009122 7.2e-17 92.8 226 36.7
CSS0006520 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.8e-12 78.2 64 57.8
CSS0048863 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.8e-12 78.2 64 57.8
CSS0018491 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 5.0e-10 70.1 45 71.1
ClCG03G010480 Citrullus lanatus HOM05D007201 ORTHO05D009122 8.5e-10 69.3 221 30.3
CSS0038290 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 3.2e-09 67.4 44 70.5
arahy.Tifrunner.gnm1.ann1.IV261E Arachis hypogaea HOM05D000013 ORTHO05D000506 2.7e-08 64.3 101 46.5
CSS0012149 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 3.3e-06 57.4 44 59.1
CSS0032596 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 3.3e-06 57.4 44 59.1


User provided reference genes

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