Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 5.4e-229 797.3 417 100.0
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 7.0e-176 620.9 443 76.7
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 3.5e-175 618.6 445 76.0
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 3.5e-175 618.6 445 75.3
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 4.5e-175 618.2 443 76.1
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 5.0e-174 614.8 441 75.5
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 1.1e-173 613.6 443 73.8
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 1.5e-173 613.2 435 75.9
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.9e-173 612.8 441 75.5
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.2e-172 610.1 441 74.6
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.6e-172 609.8 445 74.6
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 8.8e-171 604.0 442 75.3
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 2.6e-170 602.4 442 75.1
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 3.7e-169 598.6 444 72.7
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 9.1e-168 594.0 442 74.7
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 3.5e-167 592.0 445 72.4
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 4.5e-167 591.7 398 78.1
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 1.0e-166 590.5 444 73.6
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 6.5e-166 587.8 442 71.9
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 1.1e-165 587.0 405 76.5
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 3.2e-165 585.5 445 72.6
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.6e-164 583.2 442 71.7
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 2.7e-164 582.4 405 76.3
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 4.7e-164 581.6 405 76.3
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 4.7e-164 581.6 456 71.3
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 3.0e-163 578.9 398 77.6
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 6.8e-163 577.8 425 74.4
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 2.6e-162 575.9 408 74.0
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 3.4e-162 575.5 398 76.9
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 2.8e-161 572.4 418 73.9
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 1.4e-160 570.1 423 73.5
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 1.8e-160 569.7 430 72.8
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 1.8e-160 569.7 410 72.4
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 2.4e-160 569.3 428 72.2
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 3.5e-159 565.5 446 70.0
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 5.9e-159 564.7 521 61.8
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 7.7e-159 564.3 535 62.6
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 1.9e-157 559.7 555 60.0
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 4.3e-157 558.5 366 80.3
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 2.8e-156 555.8 522 62.3
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 1.0e-155 553.9 418 73.2
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.8e-155 553.1 407 74.0
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 3.0e-155 552.4 430 71.6
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 8.9e-155 550.8 420 71.4
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 9.8e-154 547.4 430 69.5
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 8.3e-153 544.3 412 73.5
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.6e-151 540.0 443 66.8
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 1.7e-150 536.6 441 67.6
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 3.9e-150 535.4 416 70.2
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 6.6e-150 534.6 412 69.9
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.1e-149 533.9 419 71.6
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 1.5e-149 533.5 426 69.2
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 1.9e-149 533.1 430 68.8
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 3.3e-149 532.3 431 68.9
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 3.6e-148 528.9 433 67.9
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.4e-147 526.9 440 65.9
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 5.2e-147 525.0 440 66.4
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 1.2e-146 523.9 436 66.3
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 2.6e-146 522.7 378 74.1
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 7.5e-146 521.2 406 68.2
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 4.9e-145 518.5 413 67.6
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.1e-144 517.3 442 66.1
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.4e-144 516.9 439 66.5
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 7.0e-144 514.6 416 66.8
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 4.3e-141 505.4 418 65.1
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 1.1e-139 500.7 438 64.6
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 5.2e-139 498.4 419 67.3
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 3.7e-137 492.3 416 65.1
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 1.9e-136 490.0 408 66.4
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 4.6e-135 485.3 418 65.1
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 3.0e-134 482.6 329 77.2
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 1.6e-132 476.9 358 71.5
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 4.7e-132 475.3 315 79.0
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 2.0e-130 469.9 428 64.5
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 2.6e-130 469.5 353 71.4
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 7.6e-130 468.0 396 66.2
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 4.1e-128 462.2 449 61.9
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 3.3e-125 452.6 363 69.1
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 1.6e-124 450.3 437 58.4
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 1.4e-123 447.2 334 71.6
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 4.0e-123 445.7 415 63.6
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 2.6e-122 443.0 322 70.8
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.2e-121 439.9 362 68.0
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 2.9e-121 439.5 416 59.6
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 8.4e-121 438.0 313 74.1
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 2.1e-119 433.3 321 72.6
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 3.0e-118 429.5 332 70.2
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 5.1e-118 428.7 428 57.2
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 6.6e-118 428.3 437 58.4
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.6e-116 423.7 436 57.1
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 4.8e-116 422.2 332 69.6
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.1e-115 421.0 393 57.5
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 4.0e-115 419.1 355 66.2
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 7.6e-114 414.8 331 68.0
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 1.4e-112 410.6 349 66.5
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 3.5e-111 406.0 336 66.7
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 4.6e-111 405.6 416 56.0
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 7.9e-111 404.8 350 64.0
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 1.8e-110 403.7 418 58.6
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 1.1e-109 401.0 351 65.8
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 4.5e-106 389.0 403 57.6
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 6.9e-99 365.2 396 55.3
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 5.1e-94 349.0 407 50.6
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 1.9e-93 347.1 415 49.6
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 1.8e-91 340.5 407 52.8
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 5.9e-90 335.5 424 46.7
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 3.9e-86 322.8 335 52.5
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 4.1e-83 312.8 337 56.7
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 2.4e-75 287.0 325 53.8
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.1e-72 278.1 300 57.3
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 6.7e-70 268.9 222 65.3
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 1.1e-67 261.5 237 64.6
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 6.5e-65 252.3 222 63.1
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 2.8e-47 193.7 326 39.0
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 3.0e-46 190.3 311 39.9
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 1.3e-41 174.9 327 39.8
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.1e-35 155.2 393 31.0
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 6.6e-33 146.0 84 88.1
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.1e-32 145.2 81 90.1
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 3.3e-32 143.7 81 88.9
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 5.6e-32 142.9 81 88.9
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 9.5e-32 142.1 83 86.7
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 6.2e-31 139.4 74 94.6
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 8.9e-30 135.6 84 81.0
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 1.2e-29 135.2 84 82.1
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 2.6e-29 134.0 84 78.6
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 7.5e-29 132.5 81 85.2
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 9.8e-29 132.1 81 82.7
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 2.2e-28 131.0 84 78.6
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 2.9e-28 130.6 81 79.0
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 3.7e-28 130.2 84 77.4
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.1e-15 87.8 88 55.7
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.4e-13 80.5 58 75.9
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 1.9e-11 74.7 87 49.4
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 4.6e-10 70.1 49 69.4
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 3.9e-09 67.0 74 45.9
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 4.3e-08 63.5 30 100.0


User provided reference genes

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