Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc32.135 Carica papaya HOM05D003289 ORTHO05D004594 8.2e-79 297.0 148 100.0
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 2.6e-48 195.7 141 69.5
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 7.5e-48 194.1 144 72.2
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 9.8e-48 193.7 143 69.9
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 9.8e-48 193.7 143 68.5
A06p05280 Brassica napus HOM05D003289 ORTHO05D004594 2.2e-47 192.6 143 69.2
C05p06350 Brassica napus HOM05D003289 ORTHO05D004594 2.2e-47 192.6 143 69.2
BolC5t29391H Brassica oleracea HOM05D003289 ORTHO05D004594 2.2e-47 192.6 143 69.2
BraA06t23736Z Brassica rapa HOM05D003289 ORTHO05D004594 2.2e-47 192.6 143 69.2
Thhalv10006524m.g Eutrema salsugineum HOM05D003289 ORTHO05D004594 2.8e-47 192.2 143 69.2
Sp1g06890 Schrenkiella parvula HOM05D003289 ORTHO05D004594 2.8e-47 192.2 143 69.2
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 1.8e-46 189.5 143 70.6
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 2.4e-46 189.1 143 68.5
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 3.1e-46 188.7 143 68.5
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 3.1e-46 188.7 140 69.3
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 4.1e-46 188.3 144 67.4
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 5.4e-46 188.0 144 68.8
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 5.4e-46 188.0 143 67.1
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 7.0e-46 187.6 145 70.3
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 1.2e-45 186.8 144 69.4
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 1.2e-45 186.8 141 68.1
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 1.6e-45 186.4 143 66.4
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 1.6e-45 186.4 143 68.5
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 2.0e-45 186.0 141 69.5
CiPaw.13G138900 Carya illinoinensis HOM05D003289 ORTHO05D004594 2.7e-45 185.7 143 68.5
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 3.5e-45 185.3 144 69.4
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 3.5e-45 185.3 144 70.1
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 4.5e-45 184.9 144 68.8
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 4.5e-45 184.9 147 69.4
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 5.9e-45 184.5 141 68.1
Psat7g189880 Pisum sativum HOM05D003289 ORTHO05D004594 5.9e-45 184.5 138 67.4
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 1.0e-44 183.7 144 68.1
CARHR008100 Cardamine hirsuta HOM05D003289 ORTHO05D004594 1.3e-44 183.3 143 65.0
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 1.3e-44 183.3 141 68.8
Carub.0001s0761 Capsella rubella HOM05D003289 ORTHO05D004594 1.7e-44 183.0 143 67.8
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 1.7e-44 183.0 144 67.4
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 2.3e-44 182.6 143 67.1
AL1G18660 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 2.9e-44 182.2 143 67.1
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 2.9e-44 182.2 144 69.4
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 2.9e-44 182.2 144 69.4
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 2.9e-44 182.2 143 67.8
BcaB07g34067 Brassica carinata HOM05D003289 ORTHO05D004594 3.8e-44 181.8 143 67.1
Gohir.D05G085450 Gossypium hirsutum HOM05D003289 ORTHO05D004594 3.8e-44 181.8 143 68.5
Manes.04G006100 Manihot esculenta HOM05D003289 ORTHO05D004594 3.8e-44 181.8 144 67.4
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 3.8e-44 181.8 139 66.2
AT1G08260 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 6.5e-44 181.0 143 66.4
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 1.1e-43 180.3 140 68.6
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 1.1e-43 180.3 144 68.8
vmacro03295 Vaccinium macrocarpon HOM05D003289 ORTHO05D004594 1.5e-43 179.9 151 65.6
Solyc11g067110.2 Solanum lycopersicum HOM05D003289 ORTHO05D004594 2.5e-43 179.1 139 64.7
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 2.5e-43 179.1 139 64.7
Nitab4.5_0004240g0050 Nicotiana tabacum HOM05D003289 ORTHO05D004594 4.2e-43 178.3 142 66.9
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 7.2e-43 177.6 142 69.0
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 7.2e-43 177.6 144 65.3
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 7.2e-43 177.6 140 67.1
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 7.2e-43 177.6 141 68.8
Nitab4.5_0003532g0040 Nicotiana tabacum HOM05D003289 ORTHO05D004594 9.5e-43 177.2 142 66.2
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 1.2e-42 176.8 140 66.4
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 2.1e-42 176.0 148 64.2
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 2.1e-42 176.0 147 64.6
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 2.1e-42 176.0 159 62.9
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 2.8e-42 175.6 144 66.0
Sc21g0007220 Simmondsia chinensis HOM05D003289 ORTHO05D004594 2.8e-42 175.6 145 66.9
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 3.6e-42 175.3 142 69.0
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 6.1e-42 174.5 139 65.5
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 6.1e-42 174.5 144 63.2
FAN21G1989 Fragaria x ananassa HOM05D003289 ORTHO05D004594 8.0e-42 174.1 141 67.4
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 1.4e-41 173.3 140 62.9
MBI15_g40425_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 1.4e-41 173.3 144 65.3
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 1.8e-41 172.9 141 67.4
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 1.8e-41 172.9 141 67.4
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 1.8e-41 172.9 143 62.2
Oeu031488.2 Olea europaea HOM05D003289 ORTHO05D004594 3.0e-41 172.2 142 63.4
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 4.0e-41 171.8 138 64.5
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 4.0e-41 171.8 143 62.9
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 8.9e-41 170.6 141 66.0
Aqoxy16s008 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 2.0e-40 169.5 143 62.9
CARHR038400 Cardamine hirsuta HOM05D003289 ORTHO05D004594 2.0e-40 169.5 180 53.9
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 2.0e-40 169.5 143 62.2
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 9.8e-40 167.2 145 64.1
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 1.7e-39 166.4 145 62.1
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 2.2e-39 166.0 145 61.4
Glyma.11G237700 Glycine max HOM05D003289 ORTHO05D004594 4.1e-38 161.8 143 60.1
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 4.1e-38 161.8 144 60.4
ATR0820G092 Amborella trichopoda HOM05D003289 ORTHO05D004594 5.4e-38 161.4 131 61.8
FAN25G3673 Fragaria x ananassa HOM05D003289 ORTHO05D004594 7.0e-38 161.0 162 58.6
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 1.2e-37 160.2 143 62.9
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 1.6e-37 159.8 142 61.3
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 1.6e-37 159.8 142 61.3
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 2.7e-37 159.1 136 58.1
AL4G20650 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 1.0e-36 157.1 120 65.8
AL4G20810 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 1.0e-36 157.1 120 65.8
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 2.9e-36 155.6 144 59.0
AT2G27120 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 8.6e-36 154.1 131 63.4
Os02g0511900 Oryza sativa ssp. japonica HOM05D003289 ORTHO05D004594 1.5e-35 153.3 136 59.6
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 7.3e-35 151.0 130 60.8
Peaxi162Scf00544g00922 Petunia axillaris HOM05D003289 ORTHO05D004594 2.3e-33 146.0 142 56.3
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 1.7e-31 139.8 141 57.4
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 7.0e-30 134.4 142 56.3
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 2.7e-29 132.5 144 52.1
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 6.0e-29 131.3 131 53.4
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 1.3e-28 130.2 131 51.1
Hma1.2p1_0305F.1_g119455 Hydrangea macrophylla HOM05D003289 ORTHO05D004594 9.5e-27 124.0 90 71.1
MELO3C002892.2 Cucumis melo HOM05D003289 ORTHO05D004594 1.5e-24 116.7 139 48.9
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 1.3e-23 113.6 131 47.3
MCO02G508 Micromonas commoda HOM05D003289 ORTHO05D004594 5.6e-19 98.2 136 39.7
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 1.6e-18 96.7 119 42.9
Cre03.g179961 Chlamydomonas reinhardtii HOM05D003289 ORTHO05D004594 2.6e-16 89.4 119 39.5
CDE02G3768 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 6.0e-13 78.2 140 37.1
PRCOL_00004747 Prasinoderma coloniale HOM05D003289 ORTHO05D004594 3.0e-12 75.9 117 35.0
CAN.G1177.10 Capsicum annuum HOM05D003289 ORTHO05D004594 3.9e-12 75.5 78 50.0
Aa31LG1G200 Aethionema arabicum HOM05D003289 ORTHO05D004594 6.2e-10 68.2 53 62.3
ClCG09G020590 Citrullus lanatus HOM05D003289 ORTHO05D004594 2.4e-09 66.2 54 57.4
Cfa025881 Carpinus fangiana HOM05D003289 ORTHO05D004594 2.0e-08 63.2 115 28.7
Ah.08g215950 Amaranthus hybridus HOM05D003289 ORTHO05D004594 6.4e-07 58.2 53 58.5
Dinv42575 Davidia involucrata HOM05D003289 ORTHO05D004594 3.2e-06 55.8 57 52.6


User provided reference genes

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