Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2744.1 Carica papaya HOM05D003939 ORTHO05D005979 1.1e-245 852.8 435 100.0
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 1.0e-182 643.7 438 75.3
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 2.3e-182 642.5 437 75.7
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 1.3e-180 636.7 437 74.8
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 4.9e-180 634.8 437 74.8
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 8.3e-180 634.0 437 73.5
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 1.4e-179 633.3 437 73.5
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 4.1e-179 631.7 437 73.2
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 4.6e-178 628.2 437 73.7
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 1.0e-177 627.1 437 74.6
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 1.3e-177 626.7 437 72.1
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 6.6e-177 624.4 437 73.5
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 1.1e-176 623.6 437 73.5
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 9.5e-176 620.5 437 72.3
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 1.2e-175 620.2 437 71.9
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 1.1e-174 617.1 436 72.2
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 5.2e-174 614.8 437 70.9
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 8.9e-174 614.0 437 71.6
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 9.8e-173 610.5 435 71.7
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 1.9e-171 606.3 416 75.2
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 5.1e-169 598.2 437 70.3
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 2.3e-166 589.3 438 68.3
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 2.0e-165 586.3 437 69.3
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 8.3e-164 580.9 437 68.9
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 4.1e-163 578.6 436 68.8
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 1.6e-162 576.6 437 65.7
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.6e-162 576.6 437 68.6
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 2.1e-162 576.2 437 68.4
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.1e-162 576.2 437 68.4
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 2.7e-162 575.9 440 68.0
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 6.0e-162 574.7 438 67.8
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 2.3e-161 572.8 437 67.7
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 6.6e-161 571.2 436 68.8
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 8.6e-161 570.9 435 67.8
Glyma.19G029100 Glycine max HOM05D003939 ORTHO05D005979 1.5e-160 570.1 435 67.8
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 4.3e-160 568.5 436 68.6
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 5.6e-160 568.2 437 67.0
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.6e-159 566.6 436 68.3
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 2.1e-159 566.2 438 65.8
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 8.1e-159 564.3 438 66.4
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 7.6e-157 557.8 437 65.2
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 7.6e-157 557.8 435 65.1
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 4.2e-155 552.0 435 66.0
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 2.1e-154 549.7 435 65.7
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 2.7e-154 549.3 436 66.3
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 4.6e-154 548.5 436 66.7
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 6.0e-154 548.1 437 64.3
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 2.5e-152 542.7 437 62.2
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 4.3e-152 542.0 436 65.1
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 4.3e-152 542.0 435 65.7
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 5.6e-152 541.6 435 66.2
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 5.6e-152 541.6 435 65.3
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 1.3e-151 540.4 436 64.7
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 1.3e-151 540.4 434 65.4
TAR371G1006 Trochodendron aralioides HOM05D003939 ORTHO05D005979 1.3e-151 540.4 437 65.9
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 1.6e-151 540.0 435 64.8
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 1.6e-151 540.0 435 64.8
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 1.6e-151 540.0 436 65.6
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 1.6e-151 540.0 437 62.7
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 3.6e-151 538.9 436 64.9
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 4.8e-151 538.5 435 64.6
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 1.4e-150 537.0 437 62.5
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 1.8e-150 536.6 436 64.0
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 1.8e-150 536.6 436 64.0
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 6.9e-150 534.6 436 64.2
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 1.5e-149 533.5 436 64.2
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 4.9e-148 528.5 436 63.8
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 4.9e-148 528.5 436 63.8
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 1.4e-147 526.9 437 63.2
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 4.6e-146 521.9 440 61.6
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 6.0e-146 521.5 480 60.4
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 3.0e-145 519.2 437 60.6
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 1.9e-144 516.5 437 60.0
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 7.3e-144 514.6 437 60.4
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 1.3e-143 513.8 437 61.6
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 5.3e-142 508.4 437 60.6
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 5.3e-142 508.4 461 58.1
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 5.8e-141 505.0 437 60.2
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 2.9e-140 502.7 434 60.1
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 8.4e-140 501.1 433 59.8
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 4.2e-139 498.8 433 59.8
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 7.1e-139 498.0 433 60.3
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 2.3e-137 493.0 480 54.6
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 3.9e-137 492.3 433 59.6
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 1.5e-136 490.3 433 59.4
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 1.3e-135 487.3 435 60.5
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 5.8e-133 478.4 440 58.0
CiPaw.03G089600 Carya illinoinensis HOM05D003939 ORTHO05D005979 7.6e-133 478.0 324 75.9
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 2.9e-132 476.1 437 57.0
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 2.7e-130 469.5 443 55.3
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 3.0e-129 466.1 437 57.0
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 4.0e-126 455.7 437 57.7
Oeu007060.1 Olea europaea HOM05D003939 ORTHO05D005979 3.5e-122 442.6 437 54.9
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 4.6e-122 442.2 437 57.0
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 1.1e-120 437.6 306 71.2
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 8.5e-116 421.4 437 52.9
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 3.2e-115 419.5 437 51.9
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 7.9e-114 414.8 436 52.1
SEGI_00927 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 1.7e-111 407.1 439 50.8
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 2.1e-106 390.2 331 65.9
HPP92_012253 Vanilla planifolia HOM05D003939 ORTHO05D005979 4.7e-106 389.0 435 49.4
HPP92_012298 Vanilla planifolia HOM05D003939 ORTHO05D005979 3.3e-104 382.9 405 51.1
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 1.8e-89 334.0 436 45.2
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 8.8e-89 331.6 438 44.5
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 1.7e-79 300.8 463 38.9
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 4.1e-78 296.2 446 40.8
Prupe.2G279500 Prunus persica HOM05D003939 ORTHO05D005979 6.6e-76 288.9 344 51.5
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 6.8e-65 252.3 440 35.7
CARHR197770 Cardamine hirsuta HOM05D003939 ORTHO05D005979 4.9e-55 219.5 178 61.8
Psat5g278520 Pisum sativum HOM05D003939 ORTHO05D030477 5.8e-32 142.9 98 73.5
CAN.G61.23 Capsicum annuum HOM05D003939 ORTHO05D005979 1.3e-31 141.7 113 59.3
Gohir.1Z049344 Gossypium hirsutum HOM05D003939 ORTHO05D005979 4.2e-30 136.7 98 73.5
Psat3g154360 Pisum sativum HOM05D003939 ORTHO05D030477 6.0e-29 132.9 96 71.9
Psat3g154320 Pisum sativum HOM05D003939 ORTHO05D030477 3.9e-28 130.2 97 70.1
Cre06.g278269 Chlamydomonas reinhardtii HOM05D003939 ORTHO05D005979 2.5e-19 100.9 238 32.8
PSO063G0192 Papaver somniferum HOM05D001862 ORTHO05D005979 1.5e-11 75.1 101 44.6
SGA_v2.0_scaffold94G28616 Striga asiatica HOM05D001217 ORTHO05D001097 9.3e-06 55.8 62 43.5


User provided reference genes

Program Settings