Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc161.19 Carica papaya HOM05D002024 ORTHO05D004352 2.3e-252 875.2 469 100.0
Haze_20441 Corylus avellana HOM05D002024 ORTHO05D004352 5.4e-108 395.6 477 52.2
Cfa017696 Carpinus fangiana HOM05D002024 ORTHO05D004352 2.0e-107 393.7 475 52.4
Atru.chr2.1480 Acer truncatum HOM05D002024 ORTHO05D004352 2.2e-101 373.6 476 51.9
QL07p017660 Quercus lobata HOM05D002024 ORTHO05D004352 8.3e-101 371.7 473 51.6
TAR623G1628 Trochodendron aralioides HOM05D002024 ORTHO05D004352 1.4e-100 370.9 482 50.6
GSVIVG01029953001 Vitis vinifera HOM05D002024 ORTHO05D004352 2.3e-98 363.6 480 49.2
Gohir.A11G231400 Gossypium hirsutum HOM05D002024 ORTHO05D004352 1.1e-97 361.3 470 50.4
Duzib177G0567 Durio zibethinus HOM05D002024 ORTHO05D004352 1.2e-96 357.8 477 50.3
Gorai.007G256900 Gossypium raimondii HOM05D002024 ORTHO05D004352 4.7e-96 355.9 470 50.0
COL.COLO4_28619 Corchorus olitorius HOM05D002024 ORTHO05D004352 8.0e-96 355.1 476 51.1
Thecc.05G244100 Theobroma cacao HOM05D002024 ORTHO05D004352 1.3e-93 347.8 463 50.3
TWI60G0427 Tripterygium wilfordii HOM05D002024 ORTHO05D004352 2.9e-93 346.7 474 47.3
Duzib128G1716 Durio zibethinus HOM05D002024 ORTHO05D004352 3.7e-93 346.3 469 50.5
Gohir.D11G242700 Gossypium hirsutum HOM05D002024 ORTHO05D004352 4.9e-93 345.9 471 49.0
Hma1.2p1_0106F.1_g051130 Hydrangea macrophylla HOM05D002024 ORTHO05D004352 1.9e-92 344.0 460 49.6
Actinidia03934 Actinidia chinensis HOM05D002024 ORTHO05D004352 5.4e-92 342.4 488 47.3
Duzib106G0860 Durio zibethinus HOM05D002024 ORTHO05D004352 9.2e-92 341.7 478 48.1
Ciclev10018753m.g Citrus clementina HOM05D002024 ORTHO05D004352 2.7e-91 340.1 493 47.1
Prupe.7G010800 Prunus persica HOM05D002024 ORTHO05D004352 1.4e-87 327.8 473 48.0
MD14G1006500 Malus domestica HOM05D002024 ORTHO05D004352 2.3e-87 327.0 462 47.8
Glyma.17G187400 Glycine max HOM05D002024 ORTHO05D004352 1.2e-86 324.7 460 46.3
vmacro07561 Vaccinium macrocarpon HOM05D002024 ORTHO05D004352 2.0e-86 323.9 477 45.3
MD12G1009000 Malus domestica HOM05D002024 ORTHO05D004352 7.5e-86 322.0 466 47.0
arahy.Tifrunner.gnm1.ann1.S92YTY Arachis hypogaea HOM05D002024 ORTHO05D004352 1.7e-85 320.9 463 46.9
arahy.Tifrunner.gnm1.ann1.9M8SYH Arachis hypogaea HOM05D002024 ORTHO05D004352 4.9e-85 319.3 467 45.6
Rhsim03G0051100 Rhododendron simsii HOM05D002024 ORTHO05D004352 6.4e-85 318.9 481 45.1
TPR.G29868 Trifolium pratense HOM05D002024 ORTHO05D004352 9.2e-84 315.1 460 46.1
PGR042G1807 Punica granatum HOM05D002024 ORTHO05D004352 1.6e-83 314.3 468 45.1
Medtr6g027760 Medicago truncatula HOM05D002024 ORTHO05D004352 4.6e-83 312.8 459 45.3
Ca_25685_v3 Cicer arietinum L. HOM05D002024 ORTHO05D004352 1.7e-82 310.8 460 45.9
FAN26G3161 Fragaria x ananassa HOM05D002024 ORTHO05D004352 3.0e-82 310.1 463 47.7
Glyma.05G089300 Glycine max HOM05D002024 ORTHO05D004352 3.0e-82 310.1 460 44.3
Eucgr.A02131 Eucalyptus grandis HOM05D002024 ORTHO05D004352 6.6e-82 308.9 466 46.4
Phvul.004G073900 Phaseolus vulgaris HOM05D002024 ORTHO05D004352 1.5e-81 307.8 461 47.3
CSS0030941 Camellia sinensis var. sinensis HOM05D002024 ORTHO05D004352 1.9e-81 307.4 492 43.5
Migut.J00772 Erythranthe guttata HOM05D002024 ORTHO05D004352 2.5e-81 307.0 462 44.4
FAN23G2178 Fragaria x ananassa HOM05D002024 ORTHO05D004352 2.1e-80 303.9 463 47.1
Psat1g090200 Pisum sativum HOM05D002024 ORTHO05D004352 2.1e-80 303.9 461 44.9
Gohir.A13G164100 Gossypium hirsutum HOM05D002024 ORTHO05D004352 2.8e-80 303.5 466 45.1
Lalb_Chr02g0157321 Lupinus albus HOM05D002024 ORTHO05D004352 2.8e-80 303.5 461 43.2
FAN19G0777 Fragaria x ananassa HOM05D002024 ORTHO05D004352 6.2e-80 302.4 463 47.9
VMungo0464G1034 Vigna mungo HOM05D002024 ORTHO05D004352 1.1e-79 301.6 461 45.8
CANSAT78G1633 Cannabis sativa HOM05D002024 ORTHO05D004352 1.4e-79 301.2 458 44.5
Potri.019G038701 Populus trichocarpa HOM05D002024 ORTHO05D004352 3.1e-79 300.1 474 45.6
MELO3C008822.2 Cucumis melo HOM05D002024 ORTHO05D004352 6.8e-79 298.9 498 43.0
Gorai.013G195500 Gossypium raimondii HOM05D002024 ORTHO05D004352 2.0e-78 297.4 470 43.4
Potri.013G062800 Populus trichocarpa HOM05D002024 ORTHO05D004352 2.0e-78 297.4 476 43.9
CsaV3_4G012120 Cucumis sativus L. HOM05D002024 ORTHO05D004352 4.4e-78 296.2 488 43.0
Lj2g0020360 Lotus japonicus HOM05D002024 ORTHO05D004352 1.3e-77 294.7 462 45.0
Cc06_g17310 Coffea canephora HOM05D002024 ORTHO05D004352 1.7e-77 294.3 477 44.4
Gohir.D13G167000 Gossypium hirsutum HOM05D002024 ORTHO05D004352 2.9e-77 293.5 470 43.2
FvH4_1g28500 Fragaria vesca HOM05D002024 ORTHO05D004352 8.3e-77 292.0 463 47.1
Sabra13G0056000 Salix brachista HOM05D002024 ORTHO05D004352 2.4e-76 290.4 473 44.6
Lalb_Chr06g0174121 Lupinus albus HOM05D002024 ORTHO05D004352 4.1e-76 289.7 461 43.8
Manes.08G154300 Manihot esculenta HOM05D002024 ORTHO05D004352 1.2e-75 288.1 471 43.7
Sc22g0004540 Simmondsia chinensis HOM05D002024 ORTHO05D004352 1.3e-74 284.6 470 46.2
THA.LOC104804880 Tarenaya hassleriana HOM05D002024 ORTHO05D004352 3.0e-74 283.5 495 43.8
AT5G35910 Arabidopsis thaliana HOM05D002024 ORTHO05D004352 5.1e-74 282.7 471 44.4
Nn6g32382 Nelumbo nucifera HOM05D002024 ORTHO05D004352 6.6e-74 282.3 453 43.0
Aqoxy2G00589 Aquilegia oxysepala HOM05D002024 ORTHO05D004352 8.6e-74 282.0 475 40.8
Gorai.013G113400 Gossypium raimondii HOM05D002024 ORTHO05D004352 3.3e-73 280.0 476 44.3
Nitab4.5_0000098g0220 Nicotiana tabacum HOM05D002024 ORTHO05D004352 4.3e-73 279.6 501 40.3
AL7G44760 Arabidopsis lyrata HOM05D002024 ORTHO05D004352 1.6e-72 277.7 472 43.9
Nitab4.5_0005685g0010 Nicotiana tabacum HOM05D002024 ORTHO05D004352 4.7e-72 276.2 503 40.6
Sed0002714 Sechium edule HOM05D002024 ORTHO05D004352 1.2e-70 271.6 484 41.7
Sp7g06250 Schrenkiella parvula HOM05D002024 ORTHO05D004352 1.5e-70 271.2 469 43.9
SGA_v2.0_scaffold31G12789 Striga asiatica HOM05D002024 ORTHO05D004352 2.2e-69 267.3 461 43.2
ClCG04G005460 Citrullus lanatus HOM05D002024 ORTHO05D004352 2.9e-69 266.9 479 43.6
CARHR216730 Cardamine hirsuta HOM05D002024 ORTHO05D004352 3.8e-69 266.5 462 42.0
A05p16460 Brassica napus HOM05D002024 ORTHO05D004352 1.9e-68 264.2 471 43.3
C06p17400 Brassica napus HOM05D002024 ORTHO05D004352 2.4e-68 263.8 469 43.5
BolC6t36935H Brassica oleracea HOM05D002024 ORTHO05D004352 2.4e-68 263.8 469 43.5
PSO339G0006 Papaver somniferum HOM05D002024 ORTHO05D004352 4.2e-68 263.1 471 42.7
THA.LOC104821442 Tarenaya hassleriana HOM05D002024 ORTHO05D004352 7.1e-68 262.3 497 42.5
BcaC08g44316 Brassica carinata HOM05D002024 ORTHO05D004352 9.3e-68 261.9 468 43.2
Peaxi162Scf00905g00018 Petunia axillaris HOM05D002024 ORTHO05D004352 1.2e-67 261.5 501 40.5
AUR62041184 Chenopodium quinoa HOM05D002024 ORTHO05D004352 2.1e-67 260.8 513 40.0
BcaB02g08047 Brassica carinata HOM05D002024 ORTHO05D004352 2.7e-67 260.4 472 42.6
Thhalv10003636m.g Eutrema salsugineum HOM05D002024 ORTHO05D004352 2.7e-67 260.4 471 41.4
PSO384G0657 Papaver somniferum HOM05D002024 ORTHO05D004352 7.8e-67 258.8 466 42.1
DCAR_013482 Daucus carota HOM05D002024 ORTHO05D004352 1.3e-66 258.1 534 37.1
BraA05t20551Z Brassica rapa HOM05D002024 ORTHO05D004352 1.7e-66 257.7 469 43.1
ATR0697G132 Amborella trichopoda HOM05D002024 ORTHO05D004352 1.5e-65 254.6 496 38.5
AUR62038435 Chenopodium quinoa HOM05D002024 ORTHO05D004352 4.3e-65 253.1 524 38.2
EL10Ac5g11731 Beta vulgaris HOM05D002024 ORTHO05D004352 5.6e-65 252.7 512 41.2
Hund15117 Selenicereus undatus HOM05D002024 ORTHO05D004352 2.1e-64 250.8 504 42.1
MBI05_g12088_MAGBIO Magnolia biondii HOM05D002024 ORTHO05D004352 6.2e-64 249.2 477 40.5
Aa31LG9G18040 Aethionema arabicum HOM05D002024 ORTHO05D004352 1.1e-63 248.4 478 40.8
HanXRQChr14g0453601 Helianthus annuus HOM05D002024 ORTHO05D004352 3.1e-63 246.9 480 38.3
Carub.0007s3168 Capsella rubella HOM05D002024 ORTHO05D004352 5.3e-63 246.1 471 41.2
Sed0002639 Sechium edule HOM05D002024 ORTHO05D004352 1.5e-62 244.6 507 38.7
HanXRQChr07g0197171 Helianthus annuus HOM05D002024 ORTHO05D004352 3.4e-62 243.4 487 38.6
Gohir.D13G101300 Gossypium hirsutum HOM05D002024 ORTHO05D004352 8.4e-61 238.8 414 44.2
ECA238G4379 Erigeron canadensis HOM05D002024 ORTHO05D004352 1.9e-60 237.7 499 37.5
CDE10G0566 Ceratophyllum demersum HOM05D002024 ORTHO05D004352 6.6e-58 229.2 481 37.8
unitig_22.g5158 Utricularia gibba HOM05D002024 ORTHO05D004352 1.5e-57 228.0 472 39.6
Cc00_g10130 Coffea canephora HOM05D002024 ORTHO05D004352 7.3e-57 225.7 491 36.9
Gohir.A13G097300 Gossypium hirsutum HOM05D002024 ORTHO05D004352 9.6e-57 225.3 462 41.3
CAN.G809.7 Capsicum annuum HOM05D002024 ORTHO05D004352 4.8e-56 223.0 458 37.6
PGSC0003DMG400020924 Solanum tuberosum HOM05D002024 ORTHO05D004352 1.4e-55 221.5 486 35.0
Lsat_1_v5_gn_2_103580 Lactuca sativa HOM05D002024 ORTHO05D004352 4.0e-55 219.9 486 36.8
Ah.02g115700 Amaranthus hybridus HOM05D002024 ORTHO05D004352 3.4e-54 216.9 534 36.9
CDE10G1351 Ceratophyllum demersum HOM05D002024 ORTHO05D004352 5.8e-54 216.1 487 37.8
Solyc10g018520.1 Solanum lycopersicum HOM05D002024 ORTHO05D004352 5.8e-54 216.1 501 35.3
Sopen10g008230 Solanum pennellii HOM05D002024 ORTHO05D004352 2.2e-53 214.2 489 35.4
HPP92_007980 Vanilla planifolia HOM05D002024 ORTHO05D004352 1.5e-49 201.4 431 35.3
SGA_v2.0_scaffold112G31637 Striga asiatica HOM05D002024 ORTHO05D004352 1.3e-45 188.3 394 38.1
RcHm_v2.0_Chr3g0496311 Rosa chinensis HOM05D002024 ORTHO05D004352 7.9e-43 179.1 322 45.0
Dinv25060 Davidia involucrata HOM05D002024 ORTHO05D004352 4.3e-41 173.3 206 52.4
CSS0008621 Camellia sinensis var. sinensis HOM05D002024 ORTHO05D004352 1.4e-39 168.3 396 36.9
Actinidia37806 Actinidia chinensis HOM05D002024 ORTHO05D004352 1.8e-39 167.9 245 44.9
Lj1g0005341 Lotus japonicus HOM05D002024 ORTHO05D004352 4.1e-39 166.8 287 43.6
Zm00001eb047500 Zea mays HOM05D002024 ORTHO05D004352 1.5e-38 164.9 469 32.2
Lj1C1068G14 Lonicera japonica HOM05D002024 ORTHO05D004352 5.8e-38 162.9 457 32.8
CiPaw.09G169000 Carya illinoinensis HOM05D002024 ORTHO05D004352 1.1e-36 158.7 198 49.5
Ca_08301_v3 Cicer arietinum L. HOM05D002024 ORTHO05D004352 7.9e-35 152.5 310 37.7
Lalb_Chr14g0364731 Lupinus albus HOM05D002024 ORTHO05D004352 6.7e-34 149.4 269 40.9
DCAR_009084 Daucus carota HOM05D002024 ORTHO05D004352 1.5e-33 148.3 379 35.6
BcaC08g44317 Brassica carinata HOM05D002024 ORTHO05D004352 1.1e-31 142.1 397 35.3
CSS0046306 Camellia sinensis var. sinensis HOM05D002024 ORTHO05D004352 1.5e-30 138.3 101 65.3
AT1G54440 Arabidopsis thaliana HOM05D002024 ORTHO05D004352 2.6e-30 137.5 250 41.2
HanXRQChr10g0278481 Helianthus annuus HOM05D002024 ORTHO05D004352 4.5e-30 136.7 90 70.0
SpUn0001_0780 Schrenkiella parvula HOM05D002024 ORTHO05D004352 1.7e-29 134.8 92 69.6
BraA01t02832Z Brassica rapa HOM05D002024 ORTHO05D004352 2.2e-29 134.4 97 67.0
HanXRQChr15g0496011 Helianthus annuus HOM05D002168 ORTHO05D002277 2.2e-29 134.4 277 36.1
BcaB04g20134 Brassica carinata HOM05D002024 ORTHO05D004352 5.0e-29 133.3 92 68.5
Aa31LG2G1850 Aethionema arabicum HOM05D002024 ORTHO05D004352 6.5e-29 132.9 336 37.5
A01p26970 Brassica napus HOM05D002024 ORTHO05D004352 1.9e-28 131.3 111 61.3
Lsat_1_v5_gn_6_31721 Lactuca sativa HOM05D002024 ORTHO05D004352 1.9e-28 131.3 121 57.0
Medtr7g086370 Medicago truncatula HOM05D002024 ORTHO05D004352 1.9e-28 131.3 285 37.5
BcaB02g08049 Brassica carinata HOM05D002024 ORTHO05D004352 2.5e-28 131.0 461 32.8
Aqoxy1G00536 Aquilegia oxysepala HOM05D002024 ORTHO05D004352 3.2e-28 130.6 591 26.9
AL1G64840 Arabidopsis lyrata HOM05D002024 ORTHO05D004352 3.2e-28 130.6 175 45.7
CARHR055540 Cardamine hirsuta HOM05D002024 ORTHO05D004352 7.2e-28 129.4 105 61.9
Glyma.05G079600 Glycine max HOM05D002024 ORTHO05D004352 1.6e-27 128.3 95 62.1
RcHm_v2.0_Chr3g0496321 Rosa chinensis HOM05D002024 ORTHO05D004352 3.6e-27 127.1 85 70.6
C01p34390 Brassica napus HOM05D002024 ORTHO05D004352 1.0e-26 125.6 187 43.9
BolC1t03409H Brassica oleracea HOM05D002024 ORTHO05D004352 1.0e-26 125.6 187 43.9
BcaC09g49622 Brassica carinata HOM05D002024 ORTHO05D004352 2.3e-26 124.4 150 50.0
HanXRQChr01g0019161 Helianthus annuus HOM05D002024 ORTHO05D004352 2.3e-26 124.4 105 57.1
Carub.0002s0944 Capsella rubella HOM05D002024 ORTHO05D004352 3.9e-26 123.6 109 56.9
DCAR_009083 Daucus carota HOM05D002024 ORTHO05D004352 8.8e-26 122.5 133 51.1
ECA233G2263 Erigeron canadensis HOM05D002024 ORTHO05D004352 2.2e-24 117.9 105 56.2
Zm00001eb004370 Zea mays HOM05D002024 ORTHO05D004352 1.4e-23 115.2 218 35.3
TPR.G17861 Trifolium pratense HOM05D002024 ORTHO05D004352 9.1e-23 112.5 287 32.8
Glyma.19G115100 Glycine max HOM05D002024 ORTHO05D004352 2.2e-21 107.8 125 50.4
Glyma.05G079550 Glycine max HOM05D002024 ORTHO05D004352 2.9e-21 107.5 82 57.3
Phvul.001G114400 Phaseolus vulgaris HOM05D002024 ORTHO05D004352 8.5e-21 105.9 338 31.4
VMungo1383G3115 Vigna mungo HOM05D002024 ORTHO05D000001 4.7e-19 100.1 306 33.7
CSS0014390 Camellia sinensis var. sinensis HOM05D002024 ORTHO05D004352 1.7e-16 91.7 283 30.4
SEGI_14026 Sequoiadendron giganteum HOM05D002024 ORTHO05D004352 1.7e-16 91.7 134 41.0
SEGI_34394 Sequoiadendron giganteum HOM05D002024 ORTHO05D004352 1.7e-16 91.7 134 41.0
HanXRQChr10g0303791 Helianthus annuus HOM05D002024 ORTHO05D004352 5.9e-14 83.2 51 70.6
Thhalv10023339m.g Eutrema salsugineum HOM05D002024 ORTHO05D004352 7.7e-14 82.8 180 37.2
AUR62035829 Chenopodium quinoa HOM05D002024 ORTHO05D004352 5.0e-13 80.1 94 41.5
EL10Ac2g04414 Beta vulgaris HOM05D002024 ORTHO05D004352 1.5e-12 78.6 143 37.8
AUR62009458 Chenopodium quinoa HOM05D002024 ORTHO05D004352 2.1e-11 74.7 100 42.0
Pp3c4_22010 Physcomitrium patens HOM05D002024 ORTHO05D004352 1.5e-09 68.6 153 32.0
SMO351G0038 Selaginella moellendorffii HOM05D002024 ORTHO05D004352 5.7e-09 66.6 76 39.5
HanXRQChr06g0183141 Helianthus annuus HOM05D002024 ORTHO05D004352 2.2e-08 64.7 116 37.9
CBR_g19347 Chara braunii HOM05D002024 ORTHO05D004352 6.3e-08 63.2 136 35.3
AagrBONN_evm.TU.Sc2ySwM_228.1889 Anthoceros agrestis HOM05D002024 ORTHO05D004352 8.2e-08 62.8 73 37.0
MCO07G578 Micromonas commoda HOM05D002024 ORTHO05D004352 5.9e-06 56.6 86 33.7
TWI74G0117 Tripterygium wilfordii HOM05D002024 ORTHO05D004352 7.7e-06 56.2 94 42.6


User provided reference genes

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