Gene: Cpa.g.sc161.19

General Information

Structural Information

  • Species Carica papaya
  • Gene Identifier Cpa.g.sc161.19
  • Transcript Identifier Cpa.t.sc161.19
  • Gene Type Coding gene
  • Location supercontig_161 : 263565-266749 : positive

Gene Family Information

  • ID HOM05D002024
  • #Genes/#Species 327/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 16410187
  • tid PAC:16410187

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000467
IEA
InterProexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0044237
IEA
InterProcellular metabolic process
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT5G35910
GO:1902466
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K27 trimethylation AT5G35910
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT5G35910
GO:0043633
ISO
PLAZA Integrative Orthologypolyadenylation-dependent RNA catabolic process AT5G35910
GO:0006139
ISO
PLAZA Homology (enrichment)nucleobase-containing compound metabolic process HOM05D002024

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0000175
IEA
InterPro3'-5'-exoribonuclease activity
GO:0000166
IEA
InterPronucleotide binding
GO:0008408
ISO
PLAZA Homology (enrichment)3'-5' exonuclease activity HOM05D002024

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G35910
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G35910
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G35910
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G35910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002121 HRDC domain
IPR044876 HRDC domain superfamily
IPR045092 Exosome complex exonuclease Rrp6-like
IPR010997 HRDC-like superfamily
Mapman id Description
35.1 not assigned.annotated