Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c41130 Carica papaya HOM05D005149 ORTHO05D006251 5.0e-44 180.6 86 100.0
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 1.6e-42 175.6 86 95.3
Hma1.2p1_0327F.1_g126340 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 1.6e-42 175.6 86 95.3
Gohir.A09G246100 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.7e-42 174.9 86 94.2
Gohir.D13G181800 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.7e-42 174.9 86 94.2
Gorai.013G207400 Gossypium raimondii HOM05D005149 ORTHO05D006251 2.7e-42 174.9 86 94.2
CiPaw.13G047200 Carya illinoinensis HOM05D005149 ORTHO05D006251 3.6e-42 174.5 86 93.0
Migut.N01878 Erythranthe guttata HOM05D005149 ORTHO05D006251 3.6e-42 174.5 86 94.2
Gorai.006G271200 Gossypium raimondii HOM05D005149 ORTHO05D006251 3.6e-42 174.5 86 93.0
Phvul.011G187600 Phaseolus vulgaris HOM05D005149 ORTHO05D006251 3.6e-42 174.5 86 91.9
Potri.010G246400 Populus trichocarpa HOM05D005149 ORTHO05D006251 3.6e-42 174.5 86 94.2
Thecc.10G129400 Theobroma cacao HOM05D005149 ORTHO05D006251 3.6e-42 174.5 86 93.0
Haze_03404 Corylus avellana HOM05D005149 ORTHO05D006251 7.9e-42 173.3 86 91.9
Glyma.08G228000 Glycine max HOM05D005149 ORTHO05D006251 7.9e-42 173.3 86 91.9
QL04p050393 Quercus lobata HOM05D005149 ORTHO05D006251 7.9e-42 173.3 86 93.0
MSTRG.5085 Avicennia marina HOM05D005149 ORTHO05D006251 1.0e-41 172.9 86 93.0
PGR142G4466 Punica granatum HOM05D005149 ORTHO05D006251 1.0e-41 172.9 86 91.9
Hund06827 Selenicereus undatus HOM05D005149 ORTHO05D006251 1.0e-41 172.9 86 93.0
Actinidia17467 Actinidia chinensis HOM05D005149 ORTHO05D006251 1.4e-41 172.6 86 91.9
EL10Ac4g08774 Beta vulgaris HOM05D005149 ORTHO05D006251 1.4e-41 172.6 86 91.9
Gohir.A11G310500 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.4e-41 172.6 86 93.0
Lj3g0016494 Lotus japonicus HOM05D005149 ORTHO05D006251 1.4e-41 172.6 86 90.7
FvH4_4g11870 Fragaria vesca HOM05D005149 ORTHO05D006251 1.8e-41 172.2 86 91.9
FAN12G0991 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.8e-41 172.2 86 91.9
FAN12G2325 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.8e-41 172.2 86 91.9
FAN17G1198 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.8e-41 172.2 86 91.9
HanXRQChr06g0174201 Helianthus annuus HOM05D005149 ORTHO05D006251 1.8e-41 172.2 86 93.0
Manes.07G084100 Manihot esculenta HOM05D005149 ORTHO05D006251 1.8e-41 172.2 86 93.0
Gohir.D09G246700 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.3e-41 171.8 86 93.0
Ah.04g162660 Amaranthus hybridus HOM05D005149 ORTHO05D006251 3.0e-41 171.4 86 90.7
CANSAT56G0938 Cannabis sativa HOM05D005149 ORTHO05D006251 3.0e-41 171.4 86 89.5
Cfa010450 Carpinus fangiana HOM05D005149 ORTHO05D006251 3.0e-41 171.4 86 90.7
Cc02_g32050 Coffea canephora HOM05D005149 ORTHO05D006251 3.0e-41 171.4 86 91.9
ECA246G4563 Erigeron canadensis HOM05D005149 ORTHO05D006251 3.0e-41 171.4 86 91.9
FvH4_7g05040 Fragaria vesca HOM05D005149 ORTHO05D006251 3.0e-41 171.4 86 91.9
MD02G1263600 Malus domestica HOM05D005149 ORTHO05D006251 3.0e-41 171.4 86 90.7
Eucgr.G02641 Eucalyptus grandis HOM05D005149 ORTHO05D006251 3.9e-41 171.0 86 91.9
Ciclev10015236m.g Citrus clementina HOM05D005149 ORTHO05D006251 5.1e-41 170.6 86 91.9
RcHm_v2.0_Chr1g0331361 Rosa chinensis HOM05D005149 ORTHO05D006251 5.1e-41 170.6 86 90.7
Dinv24594 Davidia involucrata HOM05D005149 ORTHO05D006251 6.7e-41 170.2 86 90.7
MD07G1054600 Malus domestica HOM05D005149 ORTHO05D006251 6.7e-41 170.2 86 89.5
GSVIVG01027217001 Vitis vinifera HOM05D005149 ORTHO05D006251 8.8e-41 169.9 86 89.5
Ca_12171_v3 Cicer arietinum L. HOM05D005149 ORTHO05D006251 1.5e-40 169.1 86 91.9
Medtr8g044150 Medicago truncatula HOM05D005149 ORTHO05D006251 1.5e-40 169.1 86 91.9
Oeu058668.1 Olea europaea HOM05D005149 ORTHO05D006251 1.5e-40 169.1 86 91.9
CSS0030945 Camellia sinensis var. sinensis HOM05D005149 ORTHO05D006251 2.6e-40 168.3 86 91.9
SalBow4G1949 Salvia bowleyana HOM05D005149 ORTHO05D006251 2.6e-40 168.3 86 91.9
TWI38G0882 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 2.6e-40 168.3 86 90.7
Lalb_Chr03g0032361 Lupinus albus HOM05D005149 ORTHO05D006251 3.3e-40 167.9 86 90.7
Psat0s3059g0040 Pisum sativum HOM05D005149 ORTHO05D006251 3.3e-40 167.9 86 90.7
Atru.chr12.1229 Acer truncatum HOM05D005149 ORTHO05D006251 4.4e-40 167.5 86 90.7
FAN03G2277 Fragaria x ananassa HOM05D005149 ORTHO05D006251 4.4e-40 167.5 86 88.4
Lalb_Chr19g0132531 Lupinus albus HOM05D005149 ORTHO05D006251 4.4e-40 167.5 86 89.5
Sc09g0004900 Simmondsia chinensis HOM05D005149 ORTHO05D006251 4.4e-40 167.5 86 88.4
TAR633G2177 Trochodendron aralioides HOM05D005149 ORTHO05D006251 4.4e-40 167.5 86 87.2
vmacro20844 Vaccinium macrocarpon HOM05D005149 ORTHO05D006251 4.4e-40 167.5 86 89.5
unitig_749.g13551 Utricularia gibba HOM05D005149 ORTHO05D006251 5.7e-40 167.2 84 92.9
GSVIVG01010707001 Vitis vinifera HOM05D005149 ORTHO05D006251 5.7e-40 167.2 86 88.4
TPR.G35740 Trifolium pratense HOM05D005149 ORTHO05D006251 7.4e-40 166.8 86 89.5
DCAR_023093 Daucus carota HOM05D005149 ORTHO05D006251 9.7e-40 166.4 84 89.3
Lsat_1_v5_gn_3_25820 Lactuca sativa HOM05D005149 ORTHO05D006251 1.3e-39 166.0 84 90.5
Nn2g14694 Nelumbo nucifera HOM05D005149 ORTHO05D006251 1.3e-39 166.0 85 89.4
FAN07G2641 Fragaria x ananassa HOM05D005149 ORTHO05D006251 2.2e-39 165.2 83 91.6
Os01g0813500 Oryza sativa ssp. japonica HOM05D005149 ORTHO05D006251 2.8e-39 164.9 86 84.9
MBI19_g30303_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 4.8e-39 164.1 86 86.0
Solyc01g096910.3 Solanum lycopersicum HOM05D005149 ORTHO05D006251 4.8e-39 164.1 85 90.6
Sopen01g040620 Solanum pennellii HOM05D005149 ORTHO05D006251 4.8e-39 164.1 85 90.6
THA.LOC104816483 Tarenaya hassleriana HOM05D005149 ORTHO05D006251 6.3e-39 163.7 86 88.4
PSO339G6394 Papaver somniferum HOM05D005149 ORTHO05D006251 1.1e-38 162.9 86 86.0
PGSC0003DMG400027500 Solanum tuberosum HOM05D005149 ORTHO05D006251 1.1e-38 162.9 86 88.4
Aqoxy1G01331 Aquilegia oxysepala HOM05D005149 ORTHO05D006251 1.8e-38 162.2 86 86.0
Lj7C543G12 Lonicera japonica HOM05D005149 ORTHO05D006251 2.4e-38 161.8 84 90.5
CAN.G134.53 Capsicum annuum HOM05D005149 ORTHO05D006251 3.1e-38 161.4 86 88.4
AUR62014307 Chenopodium quinoa HOM05D005149 ORTHO05D006251 7.0e-38 160.2 86 84.9
AUR62034100 Chenopodium quinoa HOM05D005149 ORTHO05D006251 7.0e-38 160.2 86 84.9
HPP92_019772 Vanilla planifolia HOM05D005149 ORTHO05D006251 7.0e-38 160.2 86 82.6
MELO3C011385.2 Cucumis melo HOM05D005149 ORTHO05D006251 1.2e-37 159.5 86 86.0
CsaV3_6G035780 Cucumis sativus L. HOM05D005149 ORTHO05D006251 1.2e-37 159.5 86 86.0
Sed0022214 Sechium edule HOM05D005149 ORTHO05D006251 1.2e-37 159.5 86 86.0
Zm00001eb149970 Zea mays HOM05D005149 ORTHO05D006251 1.5e-37 159.1 86 86.0
Zm00001eb369140 Zea mays HOM05D005149 ORTHO05D006251 1.5e-37 159.1 86 86.0
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea HOM05D005149 ORTHO05D006251 2.0e-37 158.7 103 73.8
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea HOM05D005149 ORTHO05D006251 2.0e-37 158.7 103 73.8
Aa31LG11G5780 Aethionema arabicum HOM05D005149 ORTHO05D006251 2.6e-37 158.3 86 84.9
AT5G04920 Arabidopsis thaliana HOM05D005149 ORTHO05D006251 7.7e-37 156.8 86 83.7
AL6G14620 Arabidopsis lyrata HOM05D005149 ORTHO05D006251 1.0e-36 156.4 86 83.7
BcaC06g32201 Brassica carinata HOM05D005149 ORTHO05D006251 1.0e-36 156.4 86 83.7
A10p31210 Brassica napus HOM05D005149 ORTHO05D006251 1.0e-36 156.4 86 83.7
C09p71830 Brassica napus HOM05D005149 ORTHO05D006251 1.0e-36 156.4 86 83.7
BolC9t59932H Brassica oleracea HOM05D005149 ORTHO05D006251 1.0e-36 156.4 86 83.7
BraA10t45165Z Brassica rapa HOM05D005149 ORTHO05D006251 1.0e-36 156.4 86 83.7
Carub.0006s0386 Capsella rubella HOM05D005149 ORTHO05D006251 1.0e-36 156.4 86 83.7
Carub.0010s0002 Capsella rubella HOM05D005149 ORTHO05D006251 1.0e-36 156.4 86 83.7
CARHR208340 Cardamine hirsuta HOM05D005149 ORTHO05D006251 1.3e-36 156.0 86 82.6
CDE04G0393 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 1.7e-36 155.6 85 84.7
Sp6g37880 Schrenkiella parvula HOM05D005149 ORTHO05D006251 1.7e-36 155.6 86 83.7
Sed0016259 Sechium edule HOM05D005149 ORTHO05D006251 2.9e-36 154.8 84 85.7
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 6.5e-36 153.7 86 79.1
Mapoly0072s0023 Marchantia polymorpha HOM05D005149 ORTHO05D006251 1.1e-35 152.9 83 79.5
SHI21243 Sapria himalayana HOM05D005149 ORTHO05D006251 1.1e-35 152.9 82 82.9
CBR_g40666 Chara braunii HOM05D005149 ORTHO05D006251 1.9e-35 152.1 85 76.5
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis HOM05D005149 ORTHO05D006251 7.2e-35 150.2 86 75.6
Pp3c23_21630 Physcomitrium patens HOM05D005149 ORTHO05D006251 1.2e-34 149.4 86 77.9
Thhalv10013568m.g Eutrema salsugineum HOM05D005149 ORTHO05D006251 2.1e-34 148.7 86 80.2
SGA_v2.0_scaffold196G40993 Striga asiatica HOM05D005149 ORTHO05D006251 1.4e-33 146.0 154 53.2
SMO011G0007 Selaginella moellendorffii HOM05D005149 ORTHO05D006251 5.2e-33 144.1 85 76.5
Gorai.013G207600 Gossypium raimondii HOM05D005149 ORTHO05D006251 5.3e-30 134.0 69 91.3
FAN01G0635 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.2e-29 132.9 86 73.3
Gohir.D13G182000 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.0e-28 129.8 68 88.2
Glyma.15G221000 Glycine max HOM05D005149 ORTHO05D006251 7.2e-27 123.6 66 84.8
Peaxi162Scf00647g00319 Petunia axillaris HOM05D005149 ORTHO05D006251 2.1e-26 122.1 67 83.6
MD12G1098600 Malus domestica HOM05D005149 ORTHO05D006251 5.2e-25 117.5 64 81.2
PRCOL_00005700 Prasinoderma coloniale HOM05D005149 ORTHO05D006251 6.7e-25 117.1 78 65.4
Sabra08G0007600 Salix brachista HOM05D005149 ORTHO05D006251 1.5e-24 115.9 82 68.3
Cre03.g159750 Chlamydomonas reinhardtii HOM05D005149 ORTHO05D006251 9.7e-24 113.2 79 65.8
MCO16G624 Micromonas commoda HOM05D005149 ORTHO05D006251 1.7e-23 112.5 79 63.3
Prupe.2G061300 Prunus persica HOM05D005149 ORTHO05D006251 9.1e-22 106.7 50 96.0
Nn2g14693 Nelumbo nucifera HOM05D005149 ORTHO05D006251 1.7e-20 102.4 54 83.3
VMungo1127G1160 Vigna mungo HOM05D005149 ORTHO05D000001 1.7e-20 102.4 50 90.0
Cpa.g.sc54.64 Carica papaya HOM05D005149 ORTHO05D006251 4.5e-13 77.8 48 79.2
Duzib106G0431 Durio zibethinus HOM05D005149 ORTHO05D006251 1.0e-12 76.6 43 88.4
VMungo1127G0494 Vigna mungo HOM05D005149 ORTHO05D006251 2.3e-12 75.5 37 91.9
Rhsim01G0121200 Rhododendron simsii HOM05D005149 ORTHO05D006251 5.0e-12 74.3 36 97.2
ClCG08G010780 Citrullus lanatus HOM05D005149 ORTHO05D006251 7.2e-11 70.5 37 86.5
SEGI_09620 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 9.5e-11 70.1 37 83.8
ATR0068G114 Amborella trichopoda HOM05D005149 ORTHO05D006251 1.6e-10 69.3 36 88.9
Nitab4.5_0005056g0010 Nicotiana tabacum HOM05D005149 ORTHO05D006251 4.7e-10 67.8 43 81.4
CAN.G134.55 Capsicum annuum HOM05D005149 ORTHO05D006251 1.0e-09 66.6 36 88.9
SEGI_10345 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 4.0e-09 64.7 36 66.7


User provided reference genes

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