Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G016190 Citrullus lanatus HOM05D001257 ORTHO05D150695 1.1e-87 326.6 163 100.0
ClCG04G009240 Citrullus lanatus HOM05D001257 ORTHO05D007181 1.5e-20 103.6 103 56.3
Sed0007535 Sechium edule HOM05D001257 ORTHO05D007181 3.3e-20 102.4 103 56.3
Sed0017080 Sechium edule HOM05D001257 ORTHO05D007181 4.3e-20 102.1 103 54.4
MELO3C024460.2 Cucumis melo HOM05D001005 ORTHO05D007181 7.3e-20 101.3 103 54.4
CsaV3_6G039830 Cucumis sativus L. HOM05D001257 ORTHO05D007181 8.0e-19 97.8 103 54.4
Atru.chr8.1833 Acer truncatum HOM05D001257 ORTHO05D007181 1.6e-14 83.6 109 43.1
Eucgr.K01255 Eucalyptus grandis HOM05D001257 ORTHO05D007181 2.0e-14 83.2 101 45.5
MD12G1115000 Malus domestica HOM05D001257 ORTHO05D007181 7.8e-14 81.3 101 45.5
arahy.Tifrunner.gnm1.ann1.3PYJ1V Arachis hypogaea HOM05D001257 ORTHO05D007181 1.0e-13 80.9 101 44.6
COL.COLO4_26982 Corchorus olitorius HOM05D001257 ORTHO05D007181 1.7e-13 80.1 86 48.8
Prupe.6G234100 Prunus persica HOM05D001257 ORTHO05D007181 2.3e-13 79.7 101 43.6
Potri.006G125700 Populus trichocarpa HOM05D001257 ORTHO05D007181 3.0e-13 79.3 103 44.7
RcHm_v2.0_Chr3g0470031 Rosa chinensis HOM05D001257 ORTHO05D007181 3.0e-13 79.3 101 44.6
Duzib093G0752 Durio zibethinus HOM05D001257 ORTHO05D007181 3.9e-13 79.0 148 38.5
arahy.Tifrunner.gnm1.ann1.WXF9Z5 Arachis hypogaea HOM05D001257 ORTHO05D007181 6.6e-13 78.2 101 43.6
FAN02G3928 Fragaria x ananassa HOM05D001257 ORTHO05D007181 6.6e-13 78.2 101 43.6
FAN05G4689 Fragaria x ananassa HOM05D001257 ORTHO05D007181 6.6e-13 78.2 101 43.6
Thecc.05G064000 Theobroma cacao HOM05D001257 ORTHO05D007181 6.6e-13 78.2 88 47.7
Cpa.g.sc56.16 Carica papaya HOM05D001257 ORTHO05D007181 8.6e-13 77.8 86 50.0
Glyma.10G057300 Glycine max HOM05D001257 ORTHO05D007181 1.1e-12 77.4 101 43.6
FvH4_6g16180 Fragaria vesca HOM05D001257 ORTHO05D007181 1.5e-12 77.0 101 42.6
FAN09G2559 Fragaria x ananassa HOM05D001257 ORTHO05D007181 1.5e-12 77.0 107 43.0
FAN14G1289 Fragaria x ananassa HOM05D001257 ORTHO05D007181 1.5e-12 77.0 101 42.6
DCAR_017695 Daucus carota HOM05D001257 ORTHO05D007181 1.9e-12 76.6 103 42.7
Nn2g13757 Nelumbo nucifera HOM05D001257 ORTHO05D007181 1.9e-12 76.6 101 42.6
Gohir.A04G072600 Gossypium hirsutum HOM05D001257 ORTHO05D007181 3.3e-12 75.9 86 47.7
THA.LOC104806486 Tarenaya hassleriana HOM05D001257 ORTHO05D007181 3.3e-12 75.9 101 41.6
Peaxi162Scf00123g01728 Petunia axillaris HOM05D001257 ORTHO05D007181 4.3e-12 75.5 103 43.7
MBI18_g31594_MAGBIO Magnolia biondii HOM05D001257 ORTHO05D007181 9.5e-12 74.3 103 40.8
Glyma.13G144000 Glycine max HOM05D001257 ORTHO05D007181 1.2e-11 73.9 101 41.6
Sabra16G0097200 Salix brachista HOM05D001257 ORTHO05D007181 1.6e-11 73.6 55 63.6
Gohir.D04G111200 Gossypium hirsutum HOM05D001257 ORTHO05D007181 2.1e-11 73.2 82 47.6
Gorai.009G415400 Gossypium raimondii HOM05D001257 ORTHO05D007181 2.1e-11 73.2 82 47.6
Manes.09G067414 Manihot esculenta HOM05D001257 ORTHO05D007181 2.1e-11 73.2 103 41.7
Nitab4.5_0000101g0380 Nicotiana tabacum HOM05D001257 ORTHO05D007181 2.1e-11 73.2 103 42.7
Nitab4.5_0002963g0040 Nicotiana tabacum HOM05D001257 ORTHO05D007181 2.1e-11 73.2 103 42.7
Phvul.007G149600 Phaseolus vulgaris HOM05D001257 ORTHO05D007181 2.1e-11 73.2 101 41.6
Sabra06G0099200 Salix brachista HOM05D001257 ORTHO05D007181 2.1e-11 73.2 57 63.2
Cc06_g04120 Coffea canephora HOM05D001257 ORTHO05D007181 2.8e-11 72.8 85 47.1
Gohir.D09G143900 Gossypium hirsutum HOM05D001257 ORTHO05D007181 2.8e-11 72.8 88 43.2
Gorai.006G165200 Gossypium raimondii HOM05D001257 ORTHO05D007181 2.8e-11 72.8 88 43.2
Lalb_Chr20g0112641 Lupinus albus HOM05D001257 ORTHO05D007181 2.8e-11 72.8 101 39.6
Gohir.A09G148100 Gossypium hirsutum HOM05D001257 ORTHO05D007181 3.6e-11 72.4 88 43.2
TWI53G2044 Tripterygium wilfordii HOM05D001257 ORTHO05D007181 3.6e-11 72.4 88 44.3
GSVIVG01025717001 Vitis vinifera HOM05D001257 ORTHO05D007181 3.6e-11 72.4 103 41.7
Lalb_Chr21g0314991 Lupinus albus HOM05D001257 ORTHO05D007181 4.7e-11 72.0 103 41.7
HanXRQChr13g0400021 Helianthus annuus HOM05D001257 ORTHO05D007181 8.0e-11 71.2 103 40.8
CiPaw.10G131200 Carya illinoinensis HOM05D001257 ORTHO05D007181 1.1e-10 70.9 103 40.8
Hma1.2p1_0205F.1_g087190 Hydrangea macrophylla HOM05D001257 ORTHO05D007181 1.4e-10 70.5 57 59.6
VMungo0720G3016 Vigna mungo HOM05D001257 ORTHO05D007181 1.4e-10 70.5 101 39.6
CAN.G900.50 Capsicum annuum HOM05D001257 ORTHO05D007181 1.8e-10 70.1 103 42.7
Dinv35775 Davidia involucrata HOM05D001257 ORTHO05D007181 1.8e-10 70.1 57 61.4
Aqoxy3G02590 Aquilegia oxysepala HOM05D001257 ORTHO05D007181 2.3e-10 69.7 101 36.6
Lj1g0012887 Lotus japonicus HOM05D001257 ORTHO05D007181 2.3e-10 69.7 55 56.4
QL07p043907 Quercus lobata HOM05D001257 ORTHO05D007181 2.3e-10 69.7 101 41.6
Lj2A116G69 Lonicera japonica HOM05D001257 ORTHO05D007181 4.0e-10 68.9 57 57.9
Aa31LG5G22230 Aethionema arabicum HOM05D001257 ORTHO05D007181 5.2e-10 68.6 101 38.6
Lj3C984G3 Lonicera japonica HOM05D001257 ORTHO05D007181 5.2e-10 68.6 101 37.6
TAR623G0298 Trochodendron aralioides HOM05D001257 ORTHO05D007181 5.2e-10 68.6 55 58.2
arahy.Tifrunner.gnm1.ann1.4VFQ7F Arachis hypogaea HOM05D001257 ORTHO05D007181 1.2e-09 67.4 57 59.6
arahy.Tifrunner.gnm1.ann1.8SX3C7 Arachis hypogaea HOM05D001257 ORTHO05D007181 1.2e-09 67.4 57 59.6
CANSAT80G0661 Cannabis sativa HOM05D001257 ORTHO05D007181 1.2e-09 67.4 103 40.8
Solyc09g008040.3 Solanum lycopersicum HOM05D001257 ORTHO05D007181 1.5e-09 67.0 103 40.8
Sopen09g002840 Solanum pennellii HOM05D001257 ORTHO05D007181 1.5e-09 67.0 103 40.8
MSTRG.5755 Avicennia marina HOM05D001257 ORTHO05D007181 2.6e-09 66.2 103 36.9
Sc24g0002040 Simmondsia chinensis HOM05D001257 ORTHO05D007181 2.6e-09 66.2 97 39.2
PGSC0003DMG400021553 Solanum tuberosum HOM05D001257 ORTHO05D007181 2.6e-09 66.2 103 40.8
Glyma.03G182600 Glycine max HOM05D001257 ORTHO05D007181 3.4e-09 65.9 100 38.0
PSO063G3959 Papaver somniferum HOM05D001257 ORTHO05D007181 3.4e-09 65.9 55 54.5
PSO339G6674 Papaver somniferum HOM05D001257 ORTHO05D007181 3.4e-09 65.9 55 54.5
Ca_08857_v3 Cicer arietinum L. HOM05D001257 ORTHO05D007181 4.4e-09 65.5 55 50.9
Ca_29488_v3 Cicer arietinum L. HOM05D001257 ORTHO05D007181 4.4e-09 65.5 55 50.9
Lalb_Chr06g0171671 Lupinus albus HOM05D001257 ORTHO05D007181 4.4e-09 65.5 103 36.9
Medtr1g063850 Medicago truncatula HOM05D001257 ORTHO05D007181 4.4e-09 65.5 103 35.9
Ca_11492_v3 Cicer arietinum L. HOM05D001257 ORTHO05D007181 5.8e-09 65.1 101 39.6
PGR142G4115 Punica granatum HOM05D001257 ORTHO05D007181 5.8e-09 65.1 101 38.6
Lj5g0010309 Lotus japonicus HOM05D001257 ORTHO05D007181 7.5e-09 64.7 101 37.6
SGA_v2.0_scaffold40G15527 Striga asiatica HOM05D001257 ORTHO05D007181 7.5e-09 64.7 57 49.1
VMungo1383G1148 Vigna mungo HOM05D001257 ORTHO05D007181 7.5e-09 64.7 101 36.6
Glyma.19G183100 Glycine max HOM05D001257 ORTHO05D007181 9.8e-09 64.3 101 36.6
EL10Ac7g16557 Beta vulgaris HOM05D001257 ORTHO05D007181 1.3e-08 63.9 98 39.8
Phvul.001G178600 Phaseolus vulgaris HOM05D001257 ORTHO05D007181 1.3e-08 63.9 55 52.7
BcaB06g28965 Brassica carinata HOM05D001257 ORTHO05D007181 1.7e-08 63.5 101 38.6
SalBow3G1043 Salvia bowleyana HOM05D001257 ORTHO05D007181 1.7e-08 63.5 103 36.9
Ciclev10011376m.g Citrus clementina HOM05D001257 ORTHO05D007181 2.2e-08 63.2 101 37.6
Migut.J00520 Erythranthe guttata HOM05D001257 ORTHO05D007181 2.2e-08 63.2 88 42.0
BcaC02g07561 Brassica carinata HOM05D001257 ORTHO05D007181 2.9e-08 62.8 101 37.6
A04p28270 Brassica napus HOM05D001257 ORTHO05D007181 2.9e-08 62.8 101 37.6
C04p65630 Brassica napus HOM05D001257 ORTHO05D007181 2.9e-08 62.8 101 37.6
BolC4t28055H Brassica oleracea HOM05D001257 ORTHO05D007181 2.9e-08 62.8 101 37.6
Dinv37303 Davidia involucrata HOM05D001257 ORTHO05D007181 2.9e-08 62.8 103 39.8
Medtr7g101840 Medicago truncatula HOM05D001257 ORTHO05D007181 2.9e-08 62.8 55 49.1
TPR.G20194 Trifolium pratense HOM05D001257 ORTHO05D007181 2.9e-08 62.8 54 53.7
AL4G33240 Arabidopsis lyrata HOM05D001257 ORTHO05D007181 3.7e-08 62.4 101 36.6
Thhalv10016472m.g Eutrema salsugineum HOM05D001257 ORTHO05D007181 3.7e-08 62.4 101 37.6
TPR.G9370 Trifolium pratense HOM05D001257 ORTHO05D007181 3.7e-08 62.4 54 50.0
Actinidia05419 Actinidia chinensis HOM05D001257 ORTHO05D007181 4.9e-08 62.0 57 52.6
CARHR131470 Cardamine hirsuta HOM05D001257 ORTHO05D007181 4.9e-08 62.0 101 37.6
Sp4g19270 Schrenkiella parvula HOM05D001257 ORTHO05D007181 4.9e-08 62.0 162 31.5
BraA04t18310Z Brassica rapa HOM05D001257 ORTHO05D007181 6.4e-08 61.6 101 37.6
ECA233G5692 Erigeron canadensis HOM05D001257 ORTHO05D007181 6.4e-08 61.6 103 35.9
Lsat_1_v5_gn_6_27301 Lactuca sativa HOM05D001257 ORTHO05D007181 6.4e-08 61.6 103 36.9
Psat7g098560 Pisum sativum HOM05D001257 ORTHO05D007181 8.3e-08 61.2 101 34.7
vmacro07418 Vaccinium macrocarpon HOM05D001257 ORTHO05D007181 8.3e-08 61.2 55 50.9
AT2G36990 Arabidopsis thaliana HOM05D001257 ORTHO05D007181 1.1e-07 60.8 101 36.6
Carub.0004s1884 Capsella rubella HOM05D001257 ORTHO05D007181 1.4e-07 60.5 162 30.9
unitig_8.g4109 Utricularia gibba HOM05D001257 ORTHO05D007181 1.4e-07 60.5 103 36.9
AUR62041992 Chenopodium quinoa HOM05D001257 ORTHO05D007181 1.9e-07 60.1 55 52.7
C03p23960 Brassica napus HOM05D000023 ORTHO05D000014 4.1e-07 58.9 55 52.7
Psat6g073240 Pisum sativum HOM05D001257 ORTHO05D007181 7.1e-07 58.2 54 50.0
BolC3t14787H Brassica oleracea HOM05D001257 ORTHO05D007181 9.2e-07 57.8 105 36.2
BcaC01g05624 Brassica carinata HOM05D001257 ORTHO05D007181 1.6e-06 57.0 105 35.2
CSS0023649 Camellia sinensis var. sinensis HOM05D001257 ORTHO05D007181 1.6e-06 57.0 57 50.9
CDE05G2599 Ceratophyllum demersum HOM05D001257 ORTHO05D007181 2.1e-06 56.6 57 47.4
Rhsim03G0074400 Rhododendron simsii HOM05D001257 ORTHO05D007181 6.0e-06 55.1 55 47.3
CDE11G1207 Ceratophyllum demersum HOM05D001257 ORTHO05D007181 7.8e-06 54.7 57 45.6


User provided reference genes

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