Gene: TPR.G20194

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G20194
  • Transcript Identifier TPR.T20894
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG4 : 19393906-19399017 : positive

Gene Family Information

  • ID HOM05D001257
  • #Genes/#Species 497/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA20894.v2
  • id Tp57577_TGAC_v2_gene20194.v2
  • pacid 35964416

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0071482
ISO
PLAZA Integrative Orthologycellular response to light stimulus AT2G36990
GO:0071483
ISO
PLAZA Integrative Orthologycellular response to blue light AT2G36990
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G36990
GO:0090351
ISO
PLAZA Integrative Orthologyseedling development AT2G36990

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0016987
ISO
PLAZA Integrative Orthologysigma factor activity AT2G36990
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G36990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G36990
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT2G36990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014284 RNA polymerase sigma-70 like domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR007630 RNA polymerase sigma-70 region 4
IPR013324 RNA polymerase sigma factor, region 3/4-like
IPR013325 RNA polymerase sigma factor, region 2
IPR007624 RNA polymerase sigma-70 region 3
IPR000943 RNA polymerase sigma-70
IPR007627 RNA polymerase sigma-70 region 2
Mapman id Description
15.6.2.1 RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma)