Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G132800 Carya illinoinensis HOM05D003261 ORTHO05D004230 3.3e-106 388.3 182 100.0
CiPaw.06G074500 Carya illinoinensis HOM05D003261 ORTHO05D004230 1.0e-102 376.7 180 97.8
COL.COLO4_06938 Corchorus olitorius HOM05D003261 ORTHO05D004230 6.2e-52 208.0 201 56.2
Ca_01925_v3 Cicer arietinum L. HOM05D003261 ORTHO05D004230 2.2e-49 199.5 212 50.5
Hund20540 Selenicereus undatus HOM05D003261 ORTHO05D004230 9.2e-48 194.1 203 50.7
A09p49870 Brassica napus HOM05D003261 ORTHO05D004230 1.5e-45 186.8 215 47.9
BraA09t40438Z Brassica rapa HOM05D003261 ORTHO05D004230 1.5e-45 186.8 215 47.9
CBR_g46442 Chara braunii HOM05D003261 ORTHO05D004230 1.6e-44 183.3 215 47.9
BcaC09g48619 Brassica carinata HOM05D003261 ORTHO05D004230 4.7e-44 181.8 203 47.8
CiPaw.01G147300 Carya illinoinensis HOM05D003261 ORTHO05D004230 5.2e-43 178.3 103 80.6
Rhsim12G0061000 Rhododendron simsii HOM05D003261 ORTHO05D004230 6.8e-43 177.9 214 45.8
CiPaw.02G081900 Carya illinoinensis HOM05D003261 ORTHO05D004230 2.2e-41 172.9 103 76.7
ECA234G0824 Erigeron canadensis HOM05D003261 ORTHO05D004230 2.9e-41 172.6 189 50.8
Sabra10G0008000 Salix brachista HOM05D003261 ORTHO05D004230 2.9e-41 172.6 103 76.7
GSVIVG01035143001 Vitis vinifera HOM05D003261 ORTHO05D004230 3.7e-41 172.2 103 77.7
EL10Ac7g17420 Beta vulgaris HOM05D003261 ORTHO05D004230 6.4e-41 171.4 103 77.7
Hma1.2p1_1185F.1_g264960 Hydrangea macrophylla HOM05D003261 ORTHO05D004230 8.3e-41 171.0 103 76.7
TAR623G1368 Trochodendron aralioides HOM05D003261 ORTHO05D004230 8.3e-41 171.0 103 76.7
Hma1.2p1_1807F.1_g303320 Hydrangea macrophylla HOM05D003261 ORTHO05D004230 1.1e-40 170.6 102 76.5
Potri.010G012800 Populus trichocarpa HOM05D003261 ORTHO05D004230 1.1e-40 170.6 103 75.7
ClCG06G005050 Citrullus lanatus HOM05D003261 ORTHO05D004230 1.9e-40 169.9 103 76.7
MELO3C021320.2 Cucumis melo HOM05D003261 ORTHO05D004230 1.9e-40 169.9 103 76.7
HanXRQChr17g0561551 Helianthus annuus HOM05D003261 ORTHO05D004230 1.9e-40 169.9 103 75.7
Nn4g25790 Nelumbo nucifera HOM05D003261 ORTHO05D004230 1.9e-40 169.9 103 75.7
Atru.chr4.2874 Acer truncatum HOM05D003261 ORTHO05D004230 2.4e-40 169.5 103 75.7
CsaV3_6G023930 Cucumis sativus L. HOM05D003261 ORTHO05D004230 2.4e-40 169.5 103 75.7
Dinv29761 Davidia involucrata HOM05D003261 ORTHO05D004230 2.4e-40 169.5 103 74.8
Nn3g21489 Nelumbo nucifera HOM05D003261 ORTHO05D004230 2.4e-40 169.5 103 75.7
CANSAT78G0131 Cannabis sativa HOM05D003261 ORTHO05D004230 3.2e-40 169.1 103 76.7
AL3G29570 Arabidopsis lyrata HOM05D003261 ORTHO05D004230 5.4e-40 168.3 147 57.8
AUR62034658 Chenopodium quinoa HOM05D003261 ORTHO05D004230 5.4e-40 168.3 103 76.7
Ciclev10004853m.g Citrus clementina HOM05D003261 ORTHO05D004230 5.4e-40 168.3 103 75.7
DCAR_008606 Daucus carota HOM05D003261 ORTHO05D004230 5.4e-40 168.3 103 74.8
Lsat_1_v5_gn_4_36321 Lactuca sativa HOM05D003261 ORTHO05D004230 5.4e-40 168.3 100 77.0
AL7G39370 Arabidopsis lyrata HOM05D003261 ORTHO05D004230 7.1e-40 167.9 103 74.8
BcaNung00239 Brassica carinata HOM05D003261 ORTHO05D004230 7.1e-40 167.9 103 73.8
CSS0009030 Camellia sinensis var. sinensis HOM05D003261 ORTHO05D004230 7.1e-40 167.9 103 75.7
CSS0013014 Camellia sinensis var. sinensis HOM05D003261 ORTHO05D004230 7.1e-40 167.9 103 75.7
Haze_01185 Corylus avellana HOM05D003261 ORTHO05D004230 7.1e-40 167.9 103 74.8
arahy.Tifrunner.gnm1.ann1.9TJ054 Arachis hypogaea HOM05D003261 ORTHO05D004230 9.2e-40 167.5 103 74.8
arahy.Tifrunner.gnm1.ann1.JJQ0MC Arachis hypogaea HOM05D003261 ORTHO05D004230 9.2e-40 167.5 103 74.8
AUR62008590 Chenopodium quinoa HOM05D003261 ORTHO05D004230 9.2e-40 167.5 103 75.7
PGR004G2696 Punica granatum HOM05D003261 ORTHO05D004230 9.2e-40 167.5 83 90.4
MSTRG.20825 Avicennia marina HOM05D003261 ORTHO05D004230 1.2e-39 167.2 103 74.8
Aqoxy5G00755 Aquilegia oxysepala HOM05D003261 ORTHO05D004230 1.6e-39 166.8 103 73.8
A01p37650 Brassica napus HOM05D003261 ORTHO05D004230 1.6e-39 166.8 103 73.8
BolC1t04740H Brassica oleracea HOM05D003261 ORTHO05D004230 1.6e-39 166.8 103 73.8
BraA01t03826Z Brassica rapa HOM05D003261 ORTHO05D004230 1.6e-39 166.8 103 73.8
Phvul.009G249100 Phaseolus vulgaris HOM05D003261 ORTHO05D004230 1.6e-39 166.8 103 73.8
Sed0025564 Sechium edule HOM05D003261 ORTHO05D004230 1.6e-39 166.8 103 74.8
VMungo1309G2776 Vigna mungo HOM05D003261 ORTHO05D004230 1.6e-39 166.8 103 73.8
AT4G15900 Arabidopsis thaliana HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 73.8
BcaC06g33437 Brassica carinata HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 72.8
A03p49450 Brassica napus HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 72.8
C07p47500 Brassica napus HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 72.8
BolC7t45277H Brassica oleracea HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 72.8
BraA03t14046Z Brassica rapa HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 72.8
CARHR290440 Cardamine hirsuta HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 73.8
Glyma.09G043800 Glycine max HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 73.8
Glyma.15G149300 Glycine max HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 73.8
Lj7A515T86 Lonicera japonica HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 73.8
Rhsim04G0224200 Rhododendron simsii HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 73.8
RcHm_v2.0_Chr4g0422851 Rosa chinensis HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 74.8
vmacro08167 Vaccinium macrocarpon HOM05D003261 ORTHO05D004230 2.1e-39 166.4 103 73.8
BcaC06g32973 Brassica carinata HOM05D003261 ORTHO05D004230 2.7e-39 166.0 103 72.8
Cpa.g.sc16.189 Carica papaya HOM05D003261 ORTHO05D004230 2.7e-39 166.0 103 73.8
Thhalv10025068m.g Eutrema salsugineum HOM05D003261 ORTHO05D004230 2.7e-39 166.0 103 72.8
QL06p009632 Quercus lobata HOM05D003261 ORTHO05D004230 2.7e-39 166.0 102 74.5
Actinidia40288 Actinidia chinensis HOM05D003261 ORTHO05D004230 3.5e-39 165.6 103 74.8
Lj6g0023887 Lotus japonicus HOM05D003261 ORTHO05D004230 3.5e-39 165.6 103 72.8
Sp7g14350 Schrenkiella parvula HOM05D003261 ORTHO05D004230 3.5e-39 165.6 103 71.8
Carub.0007s2576 Capsella rubella HOM05D003261 ORTHO05D004230 4.6e-39 165.2 103 71.8
Migut.B01741 Erythranthe guttata HOM05D003261 ORTHO05D004230 4.6e-39 165.2 86 86.0
MBI16_g12924_MAGBIO Magnolia biondii HOM05D003261 ORTHO05D004230 4.6e-39 165.2 103 72.8
Manes.03G196900 Manihot esculenta HOM05D003261 ORTHO05D004230 4.6e-39 165.2 103 73.8
C01p47680 Brassica napus HOM05D003261 ORTHO05D004230 6.0e-39 164.9 103 72.8
Carub.0003s1638 Capsella rubella HOM05D003261 ORTHO05D004230 6.0e-39 164.9 83 86.7
PSO170G4560 Papaver somniferum HOM05D003261 ORTHO05D004230 6.0e-39 164.9 118 65.3
PSO407G0331 Papaver somniferum HOM05D003261 ORTHO05D004230 6.0e-39 164.9 118 65.3
Thecc.04G286600 Theobroma cacao HOM05D003261 ORTHO05D004230 6.0e-39 164.9 103 72.8
AagrBONN_evm.TU.Sc2ySwM_228.4942 Anthoceros agrestis HOM05D003261 ORTHO05D004230 7.8e-39 164.5 103 74.8
FvH4_4g18400 Fragaria vesca HOM05D003261 ORTHO05D004230 7.8e-39 164.5 103 72.8
FAN07G1152 Fragaria x ananassa HOM05D003261 ORTHO05D004230 7.8e-39 164.5 103 72.8
FAN12G0468 Fragaria x ananassa HOM05D003261 ORTHO05D004230 7.8e-39 164.5 103 72.8
FAN12G4234 Fragaria x ananassa HOM05D003261 ORTHO05D004230 7.8e-39 164.5 103 72.8
FAN17G0608 Fragaria x ananassa HOM05D003261 ORTHO05D004230 7.8e-39 164.5 103 72.8
MD00G1128100 Malus domestica HOM05D003261 ORTHO05D004230 7.8e-39 164.5 103 71.8
Ah.08g212490 Amaranthus hybridus HOM05D003261 ORTHO05D004230 1.0e-38 164.1 103 72.8
Eucgr.H03935 Eucalyptus grandis HOM05D003261 ORTHO05D004230 1.0e-38 164.1 103 74.8
Actinidia19581 Actinidia chinensis HOM05D003261 ORTHO05D004230 1.3e-38 163.7 103 74.8
Aa31LG10G6240 Aethionema arabicum HOM05D003261 ORTHO05D004230 1.3e-38 163.7 103 71.8
Peaxi162Scf00056g00015 Petunia axillaris HOM05D003261 ORTHO05D004230 1.3e-38 163.7 83 85.5
TWI09G1311 Tripterygium wilfordii HOM05D003261 ORTHO05D004230 1.3e-38 163.7 103 72.8
Medtr2g436510 Medicago truncatula HOM05D003261 ORTHO05D004230 1.7e-38 163.3 103 70.9
Psat1g155040 Pisum sativum HOM05D003261 ORTHO05D004230 1.7e-38 163.3 103 70.9
THA.LOC104820293 Tarenaya hassleriana HOM05D003261 ORTHO05D004230 1.7e-38 163.3 103 72.8
unitig_22.g5357 Utricularia gibba HOM05D003261 ORTHO05D004230 2.3e-38 162.9 103 71.8
CARHR091900 Cardamine hirsuta HOM05D003261 ORTHO05D004230 3.0e-38 162.5 83 85.5
COL.COLO4_13845 Corchorus olitorius HOM05D003261 ORTHO05D004230 3.0e-38 162.5 103 71.8
Sc19g0005390 Simmondsia chinensis HOM05D003261 ORTHO05D004230 3.0e-38 162.5 103 72.8
THA.LOC104821781 Tarenaya hassleriana HOM05D003261 ORTHO05D004230 3.0e-38 162.5 103 73.8
Solyc01g094480.4 Solanum lycopersicum HOM05D003261 ORTHO05D004230 3.9e-38 162.2 103 71.8
Sopen01g038290 Solanum pennellii HOM05D003261 ORTHO05D004230 3.9e-38 162.2 103 71.8
Duzib052G0276 Durio zibethinus HOM05D003261 ORTHO05D004230 5.1e-38 161.8 103 71.8
ECA234G3111 Erigeron canadensis HOM05D001191 ORTHO05D000979 5.1e-38 161.8 83 86.7
Thhalv10022263m.g Eutrema salsugineum HOM05D003261 ORTHO05D004230 5.1e-38 161.8 103 70.9
Nitab4.5_0003111g0030 Nicotiana tabacum HOM05D003261 ORTHO05D004230 5.1e-38 161.8 83 84.3
Sp3g14940 Schrenkiella parvula HOM05D003261 ORTHO05D004230 5.1e-38 161.8 83 86.7
TPR.G22357 Trifolium pratense HOM05D003261 ORTHO05D004230 5.1e-38 161.8 103 70.9
CDE08G1027 Ceratophyllum demersum HOM05D003261 ORTHO05D004230 6.6e-38 161.4 103 70.9
CDE09G0842 Ceratophyllum demersum HOM05D003261 ORTHO05D004230 6.6e-38 161.4 103 70.9
Duzib151G0067 Durio zibethinus HOM05D003261 ORTHO05D004230 6.6e-38 161.4 103 70.9
Gohir.D02G055000 Gossypium hirsutum HOM05D003261 ORTHO05D004230 6.6e-38 161.4 103 70.9
Gorai.005G060900 Gossypium raimondii HOM05D003261 ORTHO05D004230 6.6e-38 161.4 103 70.9
Prupe.1G134100 Prunus persica HOM05D003261 ORTHO05D004230 6.6e-38 161.4 103 70.9
Gohir.A02G049900 Gossypium hirsutum HOM05D003261 ORTHO05D004230 8.6e-38 161.0 103 70.9
unitig_8.g3803 Utricularia gibba HOM05D003261 ORTHO05D004230 8.6e-38 161.0 83 85.5
Cc02_g37840 Coffea canephora HOM05D003261 ORTHO05D004230 1.1e-37 160.6 86 83.7
ATR0796G128 Amborella trichopoda HOM05D003261 ORTHO05D004230 1.5e-37 160.2 103 69.9
MD16G1167100 Malus domestica HOM05D003261 ORTHO05D004230 1.9e-37 159.8 103 69.9
AT3G16650 Arabidopsis thaliana HOM05D003261 ORTHO05D004230 2.5e-37 159.5 147 55.1
Gohir.D09G239000 Gossypium hirsutum HOM05D003261 ORTHO05D004230 2.5e-37 159.5 103 70.9
Gorai.006G261700 Gossypium raimondii HOM05D003261 ORTHO05D004230 2.5e-37 159.5 103 70.9
Lalb_Chr18g0051601 Lupinus albus HOM05D003261 ORTHO05D004230 2.5e-37 159.5 103 69.9
SalBow3G0655 Salvia bowleyana HOM05D003261 ORTHO05D004230 3.3e-37 159.1 86 81.4
Mapoly0016s0006 Marchantia polymorpha HOM05D003261 ORTHO05D004230 4.3e-37 158.7 103 69.9
Rhsim06G0116500 Rhododendron simsii HOM05D003261 ORTHO05D004230 4.3e-37 158.7 83 84.3
SEGI_14553 Sequoiadendron giganteum HOM05D003261 ORTHO05D004230 4.3e-37 158.7 101 72.3
Gohir.A09G238100 Gossypium hirsutum HOM05D003261 ORTHO05D004230 7.3e-37 157.9 103 69.9
Os03g0339100 Oryza sativa ssp. japonica HOM05D003261 ORTHO05D004230 7.3e-37 157.9 103 71.8
Pp3c16_8560 Physcomitrium patens HOM05D003261 ORTHO05D004230 7.3e-37 157.9 103 69.9
Lalb_Chr15g0083461 Lupinus albus HOM05D003261 ORTHO05D004230 1.2e-36 157.1 103 68.9
Pp3c5_15520 Physcomitrium patens HOM05D003261 ORTHO05D004230 2.1e-36 156.4 103 68.9
Zm00001eb051300 Zea mays HOM05D003261 ORTHO05D004230 2.8e-36 156.0 103 70.9
MD16G1081900 Malus domestica HOM05D003261 ORTHO05D004230 3.6e-36 155.6 76 86.8
SMO240G0024 Selaginella moellendorffii HOM05D003261 ORTHO05D004230 1.4e-35 153.7 90 73.3
HPP92_023226 Vanilla planifolia HOM05D003261 ORTHO05D004230 1.8e-35 153.3 103 67.0
SGA_v2.0_scaffold95G28842 Striga asiatica HOM05D003261 ORTHO05D004230 2.3e-35 152.9 82 82.9
Prupe.6G318200 Prunus persica HOM05D003261 ORTHO05D004230 5.2e-35 151.8 103 66.0
Peaxi162Scf00089g00028 Petunia axillaris HOM05D003261 ORTHO05D004230 2.6e-34 149.4 83 78.3
Aa31LG8G3770 Aethionema arabicum HOM05D003261 ORTHO05D004230 4.4e-34 148.7 83 78.3
HanXRQChr15g0490951 Helianthus annuus HOM05D003261 ORTHO05D004230 1.7e-33 146.7 103 69.9
Nitab4.5_0001251g0010 Nicotiana tabacum HOM05D003261 ORTHO05D004230 1.7e-33 146.7 111 63.1
Peaxi162Scf00858g00015 Petunia axillaris HOM05D003261 ORTHO05D004230 4.9e-33 145.2 83 77.1
Medtr2g019400 Medicago truncatula HOM05D003261 ORTHO05D004230 6.4e-33 144.8 101 65.3
Nitab4.5_0014715g0010 Nicotiana tabacum HOM05D003261 ORTHO05D004230 1.2e-31 140.6 100 63.0
RcHm_v2.0_Chr4g0429821 Rosa chinensis HOM05D003261 ORTHO05D004230 1.6e-31 140.2 80 76.2
Cfa002537 Carpinus fangiana HOM05D003261 ORTHO05D004230 2.7e-31 139.4 72 84.7
PSO478G1326 Papaver somniferum HOM05D003261 ORTHO05D004230 6.6e-30 134.8 100 63.0
MCO14G267 Micromonas commoda HOM05D003261 ORTHO05D004230 4.3e-29 132.1 104 59.6
Cre10.g446900 Chlamydomonas reinhardtii HOM05D003261 ORTHO05D004230 4.7e-28 128.6 147 44.9
Aqoxy3G03984 Aquilegia oxysepala HOM05D003261 ORTHO05D004230 6.9e-27 124.8 183 41.0
TPR.G39909 Trifolium pratense HOM05D003261 ORTHO05D004230 6.9e-27 124.8 84 66.7
PRCOL_00003913 Prasinoderma coloniale HOM05D003261 ORTHO05D004230 8.9e-27 124.4 91 62.6
FAN07G0399 Fragaria x ananassa HOM05D003261 ORTHO05D004230 5.8e-26 121.7 66 80.3
FvH4_4g23450 Fragaria vesca HOM05D003261 ORTHO05D004230 1.7e-25 120.2 66 78.8
FAN12G3743 Fragaria x ananassa HOM05D003261 ORTHO05D004230 1.7e-25 120.2 66 78.8
BcaC09g50284 Brassica carinata HOM05D003261 ORTHO05D004230 2.9e-25 119.4 63 85.7
C01p26990 Brassica napus HOM05D003261 ORTHO05D004230 2.9e-25 119.4 63 85.7
BolC1t02648H Brassica oleracea HOM05D003261 ORTHO05D004230 2.9e-25 119.4 63 85.7
TAR365G1013 Trochodendron aralioides HOM05D003261 ORTHO05D004230 4.6e-23 112.1 58 86.2
Aqoxy7G03551 Aquilegia oxysepala HOM05D003261 ORTHO05D014021 3.0e-22 109.4 162 40.1
DCAR_030163 Daucus carota HOM05D003261 ORTHO05D004230 3.0e-22 109.4 81 59.3
DCAR_030161 Daucus carota HOM05D003261 ORTHO05D004230 1.1e-21 107.5 61 73.8
SHI00253 Sapria himalayana HOM05D003261 ORTHO05D004230 3.6e-20 102.4 54 81.5
PGSC0003DMG400008918 Solanum tuberosum HOM05D003261 ORTHO05D004230 3.6e-20 102.4 81 58.0
DCAR_030165 Daucus carota HOM05D003261 ORTHO05D004230 4.8e-20 102.1 79 57.0
CsaV3_6G046580 Cucumis sativus L. HOM05D003261 ORTHO05D004230 1.1e-19 100.9 56 78.6
Nitab4.5_0003111g0080 Nicotiana tabacum HOM05D003261 ORTHO05D004230 1.8e-19 100.1 53 83.0
COL.COLO4_10588 Corchorus olitorius HOM05D004885 ORTHO05D006124 3.1e-19 99.4 176 34.7
MELO3C007855.2 Cucumis melo HOM05D003261 ORTHO05D004230 9.0e-19 97.8 54 77.8
TPR.G7328 Trifolium pratense HOM05D003261 ORTHO05D004230 2.0e-18 96.7 54 75.9
DCAR_003343 Daucus carota HOM05D003261 ORTHO05D004230 7.6e-18 94.7 89 55.1
C08p32230 Brassica napus HOM05D000211 ORTHO05D041739 8.4e-17 91.3 46 84.8
BcaC07g40009 Brassica carinata HOM05D000211 ORTHO05D004230 1.6e-15 87.0 88 52.3
Haze_27215 Corylus avellana HOM05D003261 ORTHO05D004230 2.1e-15 86.7 77 49.4
BraA01t02073Z Brassica rapa HOM05D003261 ORTHO05D004230 7.4e-13 78.2 45 82.2
Aqoxy3G03983 Aquilegia oxysepala HOM05D003261 ORTHO05D004230 2.8e-12 76.3 89 40.4
Aqoxy5G03295 Aquilegia oxysepala HOM05D003261 ORTHO05D004230 3.6e-12 75.9 81 44.4
Nitab4.5_0002089g0060 Nicotiana tabacum HOM05D003261 ORTHO05D014021 1.4e-11 73.9 36 86.1
Sopen09g005330 Solanum pennellii HOM05D003261 ORTHO05D014021 1.4e-11 73.9 54 64.8
Migut.E01441 Erythranthe guttata HOM05D003261 ORTHO05D004230 6.4e-09 65.1 42 64.3
Solyc09g010620.1 Solanum lycopersicum HOM05D003261 ORTHO05D014021 1.6e-07 60.5 43 62.8
Peaxi162Scf00409g00039 Petunia axillaris HOM05D003261 ORTHO05D004230 6.7e-06 55.1 159 28.3
HanXRQChr05g0140631 Helianthus annuus HOM05D003261 ORTHO05D014021 8.7e-06 54.7 35 62.9


User provided reference genes

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