Gene: AT4G15900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15900
  • Transcript Identifier AT4G15900.1
  • Gene Type Coding gene
  • Location Chr4 : 9023775-9027443 : positive

Gene Family Information

  • ID HOM05D003261
  • #Genes/#Species 210/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15900.1
  • symbol PRL1
  • uniprot Q42384

Descriptions

  • Description pleiotropic regulatory locus 1
  • Computational description pleiotropic regulatory locus 1 (PRL1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G16650.1); Has 84704 Blast hits to 34179 proteins in 878 species: Archae - 64; Bacteria - 9610; Metazoa - 34201; Fungi - 18356; Plants - 10881; Viruses - 0; Other Eukaryotes - 11592 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048825
IMP
Gene Ontologycotyledon development1
GO:0002376
IEA
GOA Databaseimmune system process
GO:0045087
IEA
GOA Databaseinnate immune response
GO:0006952
IEA
GOA Databasedefense response
GO:0000398
IBA
Gene OntologymRNA splicing, via spliceosome2
GO:0009749
IMP
Gene Ontologyresponse to glucose3
GO:0048366
IMP
Gene Ontologyleaf development1
GO:0048364
IMP
Gene Ontologyroot development1
GO:0010182
IMP
Gene Ontologysugar mediated signaling pathway1
GO:0010154
IMP
Gene Ontologyfruit development1
GO:0009755
IMP
Gene Ontologyhormone-mediated signaling pathway1
GO:0006508
IMP
Gene Ontologyproteolysis1
GO:0050832
IMP
Gene Ontologydefense response to fungus4
GO:0042742
IMP
Gene Ontologydefense response to bacterium4
GO:0002758
IMP
Gene Ontologyinnate immune response-activating signal transduction4
GO:0045892
IMP
Gene Ontologynegative regulation of transcription, DNA-templated5
GO:0016567
IEA
Gene Ontologyprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3
GO:0080008
IPI
IBA
Gene OntologyCul4-RING E3 ubiquitin ligase complex1 2
GO:0071013
IBA
Gene Ontologycatalytic step 2 spliceosome2
GO:0000974
IBA
Gene OntologyPrp19 complex2
GO:0005829
HDA
Gene Ontologycytosol6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
16.2.5.1.3 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.component PRL1/MAC2