Gene: Pp3c5_15520

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_15520
  • Transcript Identifier Pp3c5_15520V3.2
  • Gene Type Coding gene
  • Location Chr05 : 10856505-10861482 : positive

Gene Family Information

  • ID HOM05D003261
  • #Genes/#Species 210/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_15520V3.2
  • pacid 32952889
  • alias Phpat.005G058900
  • alias Pp1s169_73V6
  • alias Phypa_140736
  • uniprot A0A2K1KJU0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009755
ISO
PLAZA Integrative Orthologyhormone-mediated signaling pathway AT4G15900
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT4G15900
GO:0006508
ISO
PLAZA Integrative Orthologyproteolysis AT4G15900
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT4G15900
GO:0002758
ISO
PLAZA Integrative Orthologyinnate immune response-activating signal transduction AT4G15900
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G15900
GO:0009749
ISO
PLAZA Integrative Orthologyresponse to glucose AT4G15900
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G15900
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT4G15900
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G15900
GO:0010182
ISO
PLAZA Integrative Orthologysugar mediated signaling pathway AT4G15900
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT4G15900
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G15900
GO:0080008
IBA
GOA DatabaseCul4-RING E3 ubiquitin ligase complex
GO:0000974
IBA
GOA DatabasePrp19 complex
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
16.2.5.1.3 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.component PRL1/MAC2