Gene: Solyc09g010620.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g010620.1
  • Transcript Identifier Solyc09g010620.1.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 4001625-4002116 : positive

Gene Family Information

  • ID HOM05D003261
  • #Genes/#Species 210/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g010620.1.1
  • uniprot A0A3Q7IU05
  • gene_id Solyc09g010620

Descriptions

  • Description WD40 repeat (AHRD V3.3 *-* A0A200PPU0_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome
GO:0000974
IBA
GOA DatabasePrp19 complex
GO:0080008
IBA
GOA DatabaseCul4-RING E3 ubiquitin ligase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated