Gene: Sopen01g038290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g038290
  • Transcript Identifier Sopen01g038290.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 96190929-96199268 : positive

Gene Family Information

  • ID HOM05D003261
  • #Genes/#Species 210/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g038290.1

Descriptions

  • Description Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10. | pleiotropic regulatory locus 1 (PRL1) | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT4G15900
GO:0010182
ISO
PLAZA Integrative Orthologysugar mediated signaling pathway AT4G15900
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G15900
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT4G15900
GO:0009755
ISO
PLAZA Integrative Orthologyhormone-mediated signaling pathway AT4G15900
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G15900
GO:0009749
ISO
PLAZA Integrative Orthologyresponse to glucose AT4G15900
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G15900
GO:0002758
ISO
PLAZA Integrative Orthologyinnate immune response-activating signal transduction AT4G15900
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT4G15900
GO:0006508
ISO
PLAZA Integrative Orthologyproteolysis AT4G15900
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT4G15900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT4G15900
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G15900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
16.2.5.1.3 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.component PRL1/MAC2