Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G089700 Carya illinoinensis HOM05D003939 ORTHO05D005979 3.2e-92 342.0 215 100.0
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 5.0e-69 265.0 217 75.6
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 1.0e-66 257.3 171 78.9
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 8.3e-64 247.7 216 72.2
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 7.0e-55 218.0 170 73.5
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 7.0e-55 218.0 216 60.2
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 3.5e-54 215.7 213 71.4
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 1.3e-53 213.8 216 62.0
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 1.1e-52 210.7 214 64.5
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 1.5e-52 210.3 215 61.4
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 1.9e-52 209.9 210 55.2
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 2.1e-51 206.5 215 63.7
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 3.6e-51 205.7 215 59.1
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 3.6e-51 205.7 213 59.2
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 5.2e-50 201.8 171 66.1
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 6.8e-50 201.4 209 53.6
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 8.9e-50 201.1 202 57.9
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 2.0e-49 199.9 168 58.9
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 4.4e-49 198.7 216 55.6
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 9.8e-49 197.6 213 50.7
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 9.8e-49 197.6 216 55.1
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 2.2e-48 196.4 172 66.3
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 4.9e-48 195.3 171 70.2
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 1.1e-47 194.1 172 61.0
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 1.1e-47 194.1 172 61.0
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 1.1e-47 194.1 217 54.4
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 1.4e-47 193.7 164 64.6
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.4e-47 193.7 164 64.6
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 2.4e-47 193.0 165 59.4
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.4e-47 193.0 158 67.7
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 4.1e-47 192.2 158 66.5
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 5.4e-47 191.8 175 62.9
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 5.4e-47 191.8 158 67.1
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 1.2e-46 190.7 171 62.6
Hma1.2p1_0481F.1_g162010 Hydrangea macrophylla HOM05D003939 ORTHO05D005979 2.7e-46 189.5 158 68.4
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 4.6e-46 188.7 227 54.6
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.0e-45 187.6 211 60.2
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 6.6e-45 184.9 171 64.9
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 8.6e-45 184.5 218 53.7
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 3.3e-44 182.6 166 59.6
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 3.3e-44 182.6 216 54.2
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 5.6e-44 181.8 165 65.5
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 9.5e-44 181.0 170 55.3
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 9.5e-44 181.0 217 49.8
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 1.2e-43 180.6 217 47.9
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 4.7e-43 178.7 131 68.7
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 1.8e-42 176.8 167 56.9
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 1.8e-42 176.8 172 59.3
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 4.4e-41 172.2 175 58.9
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 5.8e-41 171.8 157 64.3
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 9.8e-41 171.0 175 48.6
Glyma.19G029000 Glycine max HOM05D003939 ORTHO05D005979 9.8e-41 171.0 173 56.6
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 1.3e-40 170.6 157 58.0
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 1.7e-40 170.2 160 55.0
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 2.2e-40 169.9 150 55.3
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 2.9e-40 169.5 177 49.7
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 3.7e-40 169.1 175 48.6
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 1.1e-39 167.5 218 45.4
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 1.9e-39 166.8 175 47.4
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 1.9e-39 166.8 157 64.3
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 1.9e-39 166.8 178 51.1
PGSC0003DMG400012376 Solanum tuberosum HOM05D003939 ORTHO05D005979 1.9e-39 166.8 150 55.3
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 2.4e-39 166.4 150 61.3
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 4.1e-39 165.6 167 53.3
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 5.4e-39 165.2 166 54.8
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 7.1e-39 164.9 174 55.7
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 7.1e-39 164.9 175 56.0
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 9.2e-39 164.5 126 63.5
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 1.2e-38 164.1 129 57.4
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 1.2e-38 164.1 129 57.4
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 1.2e-38 164.1 159 57.2
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 1.6e-38 163.7 173 53.8
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 1.6e-38 163.7 173 53.8
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 1.6e-38 163.7 156 59.0
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 6.0e-38 161.8 166 59.6
CSS0039149 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.0e-37 161.0 170 60.0
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 1.7e-37 160.2 121 66.9
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 2.3e-37 159.8 129 56.6
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 2.3e-37 159.8 121 65.3
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 1.9e-36 156.8 219 46.1
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 1.9e-36 156.8 219 46.1
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 2.5e-36 156.4 137 61.3
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 7.3e-36 154.8 129 55.8
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 1.6e-35 153.7 112 63.4
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 3.6e-35 152.5 157 56.1
CSS0004390 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 8.1e-35 151.4 146 62.3
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 1.1e-34 151.0 108 63.9
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 6.8e-34 148.3 196 52.0
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 6.8e-34 148.3 158 53.2
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 7.6e-33 144.8 150 56.7
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 1.7e-32 143.7 108 61.1
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 8.4e-32 141.4 108 60.2
CDE04G2810 Ceratophyllum demersum HOM05D003939 ORTHO05D005979 3.2e-31 139.4 158 50.6
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 4.1e-31 139.0 139 67.6
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 1.6e-30 137.1 162 49.4
CSS0005126 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 2.7e-30 136.3 170 55.9
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 7.8e-30 134.8 183 42.1
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 1.5e-28 130.6 95 67.4
HPP92_012255 Vanilla planifolia HOM05D003939 ORTHO05D005979 3.3e-28 129.4 126 53.2
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 4.7e-27 125.6 161 50.9
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 6.9e-26 121.7 91 68.1
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 2.0e-25 120.2 108 55.6
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 1.7e-24 117.1 110 53.6
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 4.9e-24 115.5 117 52.1
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 2.5e-20 103.2 109 49.5
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 7.3e-20 101.7 109 47.7
SEGI_06328 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 4.8e-19 99.0 78 59.0
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 4.5e-17 92.4 125 44.0
TPR.G3973 Trifolium pratense HOM05D003939 ORTHO05D005979 2.9e-16 89.7 68 67.6
EL10Ac2g03124 Beta vulgaris HOM05D005544 ORTHO05D007303 1.1e-10 71.2 110 40.9
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 3.1e-10 69.7 108 34.3
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 2.4e-07 60.1 50 60.0


User provided reference genes

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