Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.8e-179 632.5 325 100.0
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 2.6e-154 548.9 323 87.9
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.6e-148 529.6 322 85.1
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 1.4e-144 516.5 324 83.0
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 2.5e-144 515.8 324 82.1
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 4.2e-144 515.0 324 83.0
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 7.2e-144 514.2 324 81.8
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 2.3e-142 509.2 324 81.2
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 1.1e-141 506.9 324 81.2
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 9.7e-141 503.8 324 80.6
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 2.2e-140 502.7 323 80.8
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 6.3e-140 501.1 323 80.5
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 1.4e-139 500.0 325 80.6
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 1.8e-139 499.6 324 80.2
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 6.9e-139 497.7 324 80.6
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 9.1e-139 497.3 323 81.1
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 2.0e-138 496.1 324 80.2
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 5.9e-138 494.6 409 67.0
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 7.7e-138 494.2 324 79.3
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 2.2e-137 492.7 324 79.0
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 3.8e-137 491.9 324 79.3
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 6.5e-137 491.1 326 80.4
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 1.1e-136 490.3 323 78.0
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 1.9e-136 489.6 324 78.7
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 3.2e-136 488.8 323 78.3
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 4.2e-136 488.4 323 80.5
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 7.2e-136 487.6 322 78.3
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 1.2e-135 486.9 329 77.2
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 1.2e-135 486.9 323 77.4
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 6.1e-135 484.6 324 78.1
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 6.7e-134 481.1 324 77.8
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 6.7e-134 481.1 322 78.3
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 4.4e-133 478.4 323 76.5
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 2.2e-132 476.1 323 77.7
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 2.4e-131 472.6 324 77.5
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 3.1e-131 472.2 325 76.9
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 1.1e-128 463.8 333 75.1
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.2e-128 461.8 323 75.9
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 4.0e-126 455.3 325 76.0
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 5.2e-126 454.9 324 75.3
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 8.8e-126 454.1 323 74.6
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 2.8e-124 449.1 407 63.1
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 8.2e-124 447.6 324 71.9
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 5.3e-123 444.9 324 72.8
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 2.0e-122 443.0 347 71.2
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 4.5e-122 441.8 323 74.0
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 2.9e-121 439.1 330 72.7
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 5.5e-120 434.9 324 71.6
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 2.1e-119 433.0 323 72.8
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 2.7e-119 432.6 322 70.8
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 4.7e-119 431.8 324 70.1
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 4.7e-119 431.8 326 70.2
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.0e-118 430.6 324 70.7
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 1.0e-118 430.6 324 71.6
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 3.0e-118 429.1 425 59.3
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 4.0e-118 428.7 445 57.3
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 4.4e-117 425.2 324 68.8
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 2.2e-116 422.9 325 71.1
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 3.7e-116 422.2 323 71.2
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 4.8e-116 421.8 326 71.8
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 6.3e-116 421.4 325 70.5
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.2e-114 417.2 341 66.0
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 3.2e-112 409.1 338 66.0
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 4.2e-112 408.7 330 68.2
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 8.0e-111 404.4 342 64.9
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 8.0e-111 404.4 323 68.7
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 1.4e-110 403.7 343 65.0
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 5.2e-110 401.7 345 64.3
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 1.4e-107 393.7 328 66.8
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 1.8e-107 393.3 323 68.4
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 3.3e-104 382.5 331 64.0
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 2.1e-103 379.8 327 64.8
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 6.8e-102 374.8 323 65.3
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 2.2e-100 369.8 244 77.9
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 1.4e-99 367.1 244 78.3
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 1.8e-99 366.7 324 62.0
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.3e-97 359.8 244 78.3
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 5.0e-97 358.6 322 64.6
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 7.3e-96 354.8 244 74.6
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 4.0e-94 349.0 243 73.3
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 4.0e-94 349.0 327 57.8
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 8.9e-94 347.8 327 58.7
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 1.2e-93 347.4 244 74.2
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 3.4e-93 345.9 323 63.5
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 5.8e-93 345.1 333 58.6
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 2.9e-92 342.8 336 61.9
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 6.4e-92 341.7 248 72.2
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 1.1e-91 340.9 330 57.6
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 2.0e-90 336.7 242 73.6
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 2.7e-90 336.3 242 73.6
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 2.5e-88 329.7 324 58.6
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 9.8e-85 317.8 243 69.5
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 3.7e-84 315.8 334 58.7
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 1.4e-83 313.9 245 71.4
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 7.8e-82 308.1 326 57.4
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 2.3e-81 306.6 245 67.8
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 2.3e-81 306.6 322 56.5
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 5.1e-81 305.4 246 69.9
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 2.8e-79 299.7 244 64.8
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 8.1e-79 298.1 275 62.5
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 8.1e-79 298.1 239 70.3
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 8.9e-78 294.7 244 64.3
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 7.6e-77 291.6 245 64.1
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 9.9e-77 291.2 325 52.9
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 1.3e-76 290.8 323 53.6
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 6.0e-74 282.0 334 49.1
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 2.5e-72 276.6 325 52.9
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 1.4e-67 260.8 231 68.0
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 3.5e-66 256.1 188 72.9
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 6.6e-65 251.9 216 63.9
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 2.2e-60 236.9 247 53.8
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 2.7e-58 229.9 249 55.8
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 1.2e-45 188.0 108 85.2
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.5e-37 161.0 139 60.4
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 7.9e-34 148.7 243 38.7
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 5.1e-33 146.0 79 93.7
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 2.5e-32 143.7 79 92.4
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 2.2e-31 140.6 79 88.6
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.8e-31 140.2 79 87.3
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 8.2e-31 138.7 72 95.8
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 5.3e-30 136.0 79 86.1
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 2.6e-29 133.7 221 41.2
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 3.4e-29 133.3 207 42.5
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 7.7e-29 132.1 79 83.5
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 1.7e-28 131.0 79 83.5
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 1.7e-28 131.0 79 84.8
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 3.8e-28 129.8 79 83.5
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 3.8e-28 129.8 79 81.0
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 8.5e-28 128.6 79 78.5
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 5.5e-27 125.9 79 78.5
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 5.5e-27 125.9 79 78.5
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 6.7e-17 92.4 96 61.5
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.8e-14 84.3 45 91.1
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 4.0e-09 66.6 44 72.7
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 5.7e-08 62.8 30 96.7
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 7.0e-06 55.8 68 45.6


User provided reference genes

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