Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 9.3e-198 693.3 349 100.0
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 2.2e-127 459.5 359 69.9
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 3.4e-115 419.1 334 65.6
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 4.4e-115 418.7 328 65.5
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 9.8e-115 417.5 363 63.6
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 1.2e-109 400.6 364 60.2
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 1.6e-109 400.2 376 58.5
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 3.6e-109 399.1 321 63.9
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.8e-108 396.7 360 60.3
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 2.3e-108 396.4 383 58.0
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.4e-107 392.5 321 62.3
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 4.9e-106 388.7 332 59.3
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 2.3e-103 379.8 376 56.4
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.5e-102 377.1 371 56.6
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 1.5e-102 377.1 344 58.7
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 1.9e-102 376.7 358 57.0
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 1.9e-102 376.7 320 61.6
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 3.3e-102 375.9 345 58.0
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 1.2e-101 374.0 369 54.7
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 1.2e-101 374.0 333 58.0
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 4.7e-101 372.1 347 57.1
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 4.7e-101 372.1 380 53.2
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 1.4e-100 370.5 344 57.0
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.3e-100 369.8 347 57.3
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 4.0e-100 369.0 348 56.6
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 8.9e-100 367.9 340 57.1
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 1.5e-99 367.1 366 53.6
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 4.4e-99 365.5 352 56.5
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 5.8e-99 365.2 346 56.4
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 7.5e-99 364.8 344 56.7
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.3e-98 364.0 365 55.1
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 2.2e-98 363.2 351 55.8
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 2.9e-98 362.8 351 56.4
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 3.7e-98 362.5 350 56.6
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 4.9e-98 362.1 344 56.4
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 6.4e-98 361.7 348 56.0
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 8.3e-98 361.3 348 56.0
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 8.3e-98 361.3 347 54.8
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 1.4e-97 360.5 343 56.9
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 9.2e-97 357.8 352 55.4
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.2e-96 357.5 359 55.2
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 7.8e-96 354.8 352 55.1
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 1.0e-95 354.4 318 57.5
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 3.0e-95 352.8 334 56.6
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.9e-95 352.4 304 59.5
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 3.9e-95 352.4 313 59.4
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 8.6e-95 351.3 548 42.9
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.5e-94 350.5 300 60.0
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 5.6e-94 348.6 352 55.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 5.6e-94 348.6 347 56.2
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.2e-93 347.4 335 54.3
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 1.6e-93 347.1 358 54.2
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 6.2e-93 345.1 334 55.1
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 6.2e-93 345.1 368 53.0
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 1.1e-92 344.4 350 53.4
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 1.1e-92 344.4 363 52.9
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.4e-92 344.0 351 55.8
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 2.3e-92 343.2 380 50.0
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 6.8e-92 341.7 360 52.5
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 6.8e-92 341.7 362 52.5
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 6.8e-92 341.7 364 53.8
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 1.2e-91 340.9 337 53.7
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 2.0e-91 340.1 347 54.5
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 3.4e-91 339.3 356 51.4
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 4.4e-91 339.0 357 51.3
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 1.7e-90 337.0 314 57.0
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 8.4e-90 334.7 311 55.3
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 2.4e-89 333.2 344 52.0
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 2.4e-89 333.2 344 52.0
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 2.7e-88 329.7 352 52.8
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 4.6e-88 328.9 345 51.0
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 7.8e-88 328.2 345 50.4
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.0e-87 327.8 358 51.4
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.1e-87 325.5 377 49.9
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 5.6e-86 322.0 330 52.4
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 3.6e-85 319.3 332 52.1
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 4.0e-84 315.8 316 54.1
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 3.4e-83 312.8 362 48.3
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 4.4e-83 312.4 345 51.9
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 2.2e-82 310.1 357 49.6
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.9e-81 307.0 346 50.0
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 3.2e-81 306.2 354 50.0
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 7.1e-81 305.1 326 48.5
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 3.5e-80 302.8 324 50.3
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 4.3e-78 295.8 419 43.9
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 4.3e-78 295.8 279 56.6
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 2.6e-75 286.6 292 53.8
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 4.5e-75 285.8 347 47.8
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 4.8e-69 265.8 358 46.4
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.8e-63 247.3 361 42.1
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 2.8e-61 240.0 277 49.1
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 2.3e-55 220.3 215 54.9
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 7.4e-54 215.3 194 59.3
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.1e-52 211.5 323 37.8
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 2.2e-50 203.8 228 48.7
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.4e-49 201.1 105 86.7
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.9e-49 200.7 201 54.7
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 7.2e-49 198.7 126 73.8
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 5.7e-46 189.1 179 57.5
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 8.2e-45 185.3 356 34.0
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.1e-40 170.6 208 47.6
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 8.2e-37 158.7 133 60.9
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 2.6e-35 153.7 341 34.0
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 3.8e-34 149.8 194 43.8
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 9.4e-33 145.2 257 38.5
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 1.3e-29 134.8 137 49.6
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 1.7e-26 124.4 114 54.4
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 6.5e-26 122.5 132 51.5
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 3.0e-23 113.6 145 44.1
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.9e-09 67.8 149 28.2
Aqoxy6G00310 Aquilegia oxysepala HOM05D001245 ORTHO05D004475 3.4e-06 57.0 81 35.8


User provided reference genes

Program Settings