Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 2.6e-242 841.6 439 100.0
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 8.9e-206 720.3 440 85.2
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 2.2e-188 662.5 439 79.0
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 1.1e-184 650.2 441 77.8
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 5.6e-184 647.9 439 77.4
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 9.6e-184 647.1 439 77.9
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.1e-182 643.7 439 77.9
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.4e-182 643.3 437 78.3
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 5.3e-182 641.3 439 77.0
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 4.4e-181 638.3 450 75.6
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.1e-179 633.6 439 76.8
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 1.9e-179 632.9 438 76.0
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 2.4e-179 632.5 437 77.3
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 3.2e-179 632.1 439 75.6
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 5.4e-179 631.3 438 75.8
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 4.6e-178 628.2 441 75.7
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 4.3e-176 621.7 439 75.9
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 5.6e-176 621.3 439 76.3
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 1.3e-175 620.2 439 75.6
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 3.6e-175 618.6 437 75.1
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 2.4e-174 615.9 522 65.7
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 1.5e-173 613.2 437 73.9
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 9.9e-173 610.5 438 73.7
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 1.7e-172 609.8 439 73.1
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 1.4e-171 606.7 439 73.8
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 4.2e-171 605.1 440 73.2
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 4.2e-171 605.1 437 72.8
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 1.2e-170 603.6 439 72.2
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 3.0e-169 599.0 444 72.7
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 3.9e-169 598.6 437 71.9
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 1.9e-168 596.3 443 71.3
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 1.1e-166 590.5 522 63.8
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 1.8e-166 589.7 444 70.0
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.7e-164 583.2 439 72.0
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 3.8e-164 582.0 438 71.9
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.4e-163 580.1 437 70.7
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 4.2e-163 578.6 445 71.7
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 3.3e-160 568.9 438 69.2
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 2.8e-159 565.8 541 61.6
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 4.8e-159 565.1 437 70.5
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 4.8e-159 565.1 448 68.1
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 4.8e-159 565.1 561 59.2
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 1.4e-158 563.5 431 68.4
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 3.1e-158 562.4 415 71.8
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 2.0e-157 559.7 438 68.0
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.2e-156 556.2 438 69.9
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 1.1e-155 553.9 439 69.2
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 3.0e-153 545.8 360 79.2
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 1.3e-151 540.4 439 67.0
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 6.3e-151 538.1 439 67.4
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 1.1e-150 537.3 439 66.7
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 5.3e-150 535.0 437 67.0
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 3.4e-149 532.3 441 68.3
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 1.0e-148 530.8 400 70.2
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 4.2e-147 525.4 438 66.0
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 1.2e-146 523.9 399 70.2
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.6e-146 523.5 322 85.1
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 3.9e-145 518.8 359 76.0
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 5.1e-145 518.5 437 67.7
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 2.5e-144 516.2 441 66.0
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 3.3e-144 515.8 441 64.9
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 5.7e-144 515.0 416 66.3
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.3e-143 513.8 371 72.5
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 1.3e-143 513.8 440 65.5
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 2.4e-142 509.6 412 66.7
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 5.3e-142 508.4 416 66.1
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 9.1e-142 507.7 417 66.2
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 3.4e-141 505.8 438 64.8
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 4.5e-141 505.4 419 65.6
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 7.2e-139 498.0 460 63.0
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 6.7e-137 491.5 359 72.1
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.8e-135 486.1 362 72.4
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 1.5e-133 480.3 361 70.1
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 1.0e-132 477.6 358 70.9
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 1.3e-132 477.2 410 64.6
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 7.2e-131 471.5 363 69.4
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 4.7e-130 468.8 398 63.6
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 8.0e-130 468.0 437 62.7
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 6.7e-129 464.9 399 64.4
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 4.4e-128 462.2 357 67.8
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.7e-127 460.3 393 65.1
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 4.1e-126 455.7 457 60.4
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 3.2e-123 446.0 445 57.8
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 3.2e-123 446.0 358 66.8
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.2e-122 444.1 438 59.6
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 8.3e-119 431.4 439 58.3
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 4.1e-118 429.1 416 56.0
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 7.0e-118 428.3 406 58.1
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 2.0e-117 426.8 364 62.9
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 3.5e-117 426.0 360 66.9
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 4.5e-117 425.6 446 58.1
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 4.5e-117 425.6 439 55.8
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 8.5e-116 421.4 360 65.3
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 9.4e-115 417.9 361 65.1
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 6.8e-113 411.8 361 65.4
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 2.2e-111 406.8 443 56.4
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 2.7e-109 399.8 318 65.7
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 1.0e-108 397.9 356 64.6
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.7e-108 397.1 319 65.5
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 4.4e-104 382.5 395 55.7
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 4.9e-103 379.0 322 62.7
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 9.5e-99 364.8 393 56.0
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 5.8e-96 355.5 433 49.2
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 2.4e-94 350.1 397 53.4
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 2.0e-93 347.1 225 78.7
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 1.5e-91 340.9 411 47.4
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 3.5e-85 319.7 399 52.1
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 1.2e-82 311.2 366 52.5
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 1.6e-82 310.8 309 56.0
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.7e-82 309.3 302 60.3
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 2.1e-74 283.9 326 53.4
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 8.9e-73 278.5 301 60.1
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 1.5e-67 261.2 216 67.6
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 4.2e-46 189.9 339 37.2
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.2e-45 188.3 339 38.1
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 7.4e-43 179.1 331 40.5
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.1e-38 165.2 139 61.2
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.1e-33 146.7 79 93.7
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 2.0e-32 144.4 79 92.4
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 3.4e-32 143.7 79 91.1
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 2.2e-31 141.0 72 98.6
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 5.0e-31 139.8 79 88.6
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 1.1e-30 138.7 79 88.6
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 2.7e-29 134.0 79 84.8
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.6e-29 133.7 79 86.1
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 4.6e-29 133.3 79 87.3
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 7.9e-29 132.5 79 87.3
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.0e-28 132.1 79 82.3
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 1.0e-28 132.1 79 82.3
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 6.7e-28 129.4 79 82.3
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 6.7e-28 129.4 79 82.3
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 3.0e-20 104.0 92 66.3
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.5e-14 84.3 52 80.8
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 4.0e-12 77.0 90 48.9
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 8.2e-10 69.3 44 77.3
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 4.5e-08 63.5 30 100.0
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 5.9e-08 63.2 87 46.0


User provided reference genes

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